New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	1880369 =	53 (0.900)	5 (0.090)	5/248	NT	9.2%	coding (43/930 nt)	PP_1688	LysR family transcriptional regulator
	?	NC_002947	1880411 =	49 (0.880)					coding (85/930 nt)	PP_1688	LysR family transcriptional regulator

CAGCTGTAGACCGGCAGCATTGAGTTCTTTATAAAGAAATTCTTACGAATCCAAGCGCTCACCATGGACCTGCTCAACGCCATTCGCTGCTTCATCAAGGTGGTCGAGGCCGGTAGCATCGCTGCTGGTGCCCGTATTCTCGGCCTCAGTCCGGCAGCCGTCAGCCAGAACCTGGCGCGGCTGGAAGGCCACCTGCAAGTACGCCTGCTCAGCCGAACCACACGCAGCATGGCCCTGACGCCATCTGGCGCCCAGTATTACGAGCGTGTAAAGCATATCGAGCGTGATCTGGCCCT  >  NC_002947/1880264‑1880559                                                                                                                                                    |                                                                                                                                                     ggcgccagatggcgtcagggccatgctgcgtgtggttcggctgagcaggcgtacttgcaggtggccttccagccgcgccaggttctggctgacggctgccggactGAGGCCGGTAGCATCGCTGCTGGTGCCCGTATTCTCGGCCTCa                                                                                                                                                      >  1:338523‑M1/106‑148 (MQ=255)   cgccagatggcgtcagtgccatgctgcgtgtggttcggctgagcaggcgtacttgcaggtggccttccagccgcgccaggttctggctgacggctgccggactGAGGCCGGTAGCATCGCAGCTGGTGCCCGTATTCTCGGCCTCAGTc                                                                                                                                                   >  1:209201‑M1/104‑149 (MQ=255)    cTGTAGACCGGCAGCATTGAGTTCTTTATAAAGAAATTCTTACGAATCCAAGCGCTCACCATGGACCTGCTCAACGCCATTCGCTGCTTCATCAAGGTTGTCGAGGCCGGTAGTATCGCTGCTGGTGCCCGTATTCTCGGCCTCAGTcc                                                                                                                                                  <  1:242224/149‑1 (MQ=255)    cTGTAGACCGGCAGCATTGAGTTCTTTATAAAGAAATTCTTACGAATCCAAGCGCTCACCATGGACCTGCTCAACGCCATTCGCTGCTTCATCAAGGTGGTCGAGGCCGGTAGCATCGCTGCTGGTGCCCGTATTCTCGGCCTCAGTcc                                                                                                                                                  <  5:311679/149‑1 (MQ=255)       tAGACCGGCAGCATTGAGTTCTTTATAAAGAAATTCTTACGAATCCAAGCGCTCACCATGGACCTGCTCAACGCCATTCGCTGCTTCATCAAGGTGGTCGAGGCCGGTAGCATCGCTGCTGGTGCCCGTATTCTCGGCCTCAGTCCGGc                                                                                                                                               <  1:44573/149‑1 (MQ=255)         gACCGGCAGCATTGAGTTCTTTATAAAGAAATTCTTACGAATCCAAGCGCTCACCATGGACCTGCTCAACGCCATTCGCTGCTTCATCAAGGTGGTCGAGGCCGGTAGCATCGCTGCTGGTGCCCGTATTCTCGGCCTCAGTCCGGCAg                                                                                                                                             >  2:119940/1‑149 (MQ=255)         gACCGGCAGCATTGAGTTCTTTATAAAGAAATTCTTACGAATCCAAGCGCTCACCATGGACCTGCTCAACGCCATTCGCTGCTTCATCAAGGGGGTCGAGGCCGGTAGCATCGCTGCTGGTGCCCGTATTCTCGGCCTCAGTCCGGCa                                                                                                                                              <  6:100796/148‑1 (MQ=255)            cGGCAGCATTGAGTTCTTTATAAAGAAATTCTTACGAATCCAAGCGCTCACCATGGACCTGCTCAACGCCATTCGCTGCTTCATCAAGGTGGTCGAGGCCGGTAGCATCGCTGCTGGTGCCCGTATTCTCGGCCTCAGTCCGGCAGCCg                                                                                                                                          >  2:1133/1‑149 (MQ=255)                           cTTTATAAAGAAATTCTTGCGAATCCAAGCGCTCACCATGGACCTGCTCAACGCCATTCGCTGCTTCATCAAGGTGGTCGAGGCCGGTAGCATCGCTGCTGGTGCCCGTATTCTCGGCCTCAGTCCGGCAGCCGTCAGCCAGAACCTg                                                                                                                            <  2:274876/148‑1 (MQ=255)                           cTTTATAAAGAAATTCTTGCGAATCCAAGCGCTCACCATGGACCTGCTCAACGCCATTCGCTGCTTCATCAAGGTGGTCGAGGCCGGTAGCATCGCTGCTGGTGCCCGTATTCTCGGCCTCAGTCCGGCAGCCGTCAGCCAGAACCTg                                                                                                                            >  1:274876/1‑148 (MQ=255)                              tataAAGAAATTCTTACGAATCCAAGCGCTCACCATGGACCTGCTCAACGCCATTCGCTGCTTCATCAAGGTGGTCGAGGCCGGTAGCATCGCTGCTGGTGCCCGTATTCTCGGCCTCAGTCCGGCAGCCGTCAGCCAGAACCTgg                                                                                                                           <  5:164564/146‑1 (MQ=255)                              tataAAGAAATTCTTACGAATCCAAGCGCTCACCATGGACCTGCTCAACGCCATTCGCTGCTTCATCAAGGTGGTCGAGGCCGGTAGCATCGCTGCTGGTGCCCGTATTCTCGGCCTCAGTCCGGCAGCCGTCAGCCAGAACCTgg                                                                                                                           <  7:149076/146‑1 (MQ=255)                                   aGAAATTCTTACGAATCCAAGCGCTCACCATGGACCTGATCAACGCCATTCGCTGCTTCATCAAGGTGGTCGAGGCCGGTAGCATCGCTGCTGGTGCCCGTATTCTCGGCCTCAGTCCGGCAGCCGTCAGCCAGAACCTGGCGCGGCTg                                                                                                                   >  7:233645/1‑149 (MQ=255)                                         tCTTACGAATCCAAGCGCTCACCATGGACCTGCTCAACGCCATTCGCTGCTTCATCAAGGTGGTCGAGGCCGGTAGCATCGCTGCTGGTGCCCGTATTCTCGGCCTCAGTCCGGCAGCCGTCAGCCAGAACCTGGCGCGGCTGGAAGGc                                                                                                             >  2:15993/1‑149 (MQ=255)                                          cTTACGAATCCAAGCGCTCACCATGGACCTGCTCAACGCCATTCGCTGCTTCATCAAGGTGGTCGAGGCCGGTAGCATCGCTGCTGGTGCCCGTATTCTCGGCCTCAGTCCGGCAGCCGTCAGCCAGAACCTGGCGCGGCTGGAAGGc                                                                                                             <  3:271655/148‑1 (MQ=255)                                           ttACGAATCCAAGCGCTCACCATGGACCTGCTCAACGCCATTCGCTGCTTCATCAAGGTGGTCGAGGCCGGTAGCATCGCTGCTGGTGCCCGTATTCTCGGCCTCAGTCCGGCAGCCGTCAGCCAGAACCTGGCGCGGc                                                                                                                     <  7:342886/139‑1 (MQ=255)                                           ttACGAATCCAAGCGCTCACCATGGACCTGCTCAACGCCATTCGCTGCTTCATCAAGGTGGTCGAGGCCGGTAGCATCGCTGCTGGTGCCCGTATTCTCGGCCTCAGTCCGGCAGCCGTCAGCCAGAACCTGGCGCGGc                                                                                                                     >  8:342886/1‑139 (MQ=255)                                           ttACGAATCCAAGCGCTCACCATGGACCTGCTCAACGCCATTCGCTGCTTCATCAAGGTGGTCGAGGCCGGTAGCATCGCTGCTGGTGCCCGTATTCTCGGCCTCAGTCCGGCAGCCGTCAGCCAGAACCTGGCGCGGCTGGAAGGCCa                                                                                                           >  4:273896/1‑149 (MQ=255)                                            agcaggcgtacttgcaggtggccttccagccgcgccaggttctggctgacggctgccggactGAGGCCGGTAGCATCGCTGCTGGTGCCCGTATTCTCGGCCTCAg                                                                                                                                                     <  7:313864‑M1/44‑1 (MQ=255)                                            agcaggcgtacttgcaggtggccttccagccgcgccaggttctggctgacggctgccggactGAGGCCGGTAGCATCGCTGCTGGTGCCCGTATTCTCGGCCTCAg                                                                                                                                                     >  8:313864‑M1/63‑106 (MQ=255)                                             aCGAATCCAAGCGCTCACCATGGACCTGCTCAACGCCATTCGCTGCTTCATCAAGGTGGTCGAGGCCGGTAGCATCGCTGCTGGTGCCCGTATTCTCGGCCTCAGTCCGGCAGCCGTCAGCCAGAACCTGGCGCGGCTGGAAGGCCAcc                                                                                                         >  1:170875/1‑149 (MQ=255)                                              cGAATCCAAGCGCTCACCATGGACCTGCTCAACGCCATTCGCTGCTTCATCAAGGTGGTCGAGGCCGGTAGCATCGCTGCTGGTGCCCGTATTCTCGGCCTCAGTCCGGCAGCCGTCAGCCAGAACCTGGCGCGGCTGGAAGGCCCCCt                                                                                                        >  4:95081/1‑149 (MQ=255)                                               gAATCCAAGCGCTCACCATGGACCTGCTCAACGCCATTCGCTGCTTCATCAAGGTGGTCGAGGCCGGTAGCATCGCTGCTGGTGCCCGTATTCTCGGCCTCAGTCCGGCAGCCGTCAGCCAGAACCTGGCGCGGCTGGAAGGCCACCTg                                                                                                       >  1:174197/1‑149 (MQ=255)                                                aaTCCAAGCGCTCACCATGGACCTGCTCAACGCCATTCGCTGCTTCATCAAGGTGGTCGAGGCCGGTAGCATCGCTGCTGGTGCCCGTATTCTCGGCCTCAGTCCGGCAGCCGTCAGCCAGAACCTGGCGCGGCTGGAAGGCCACCTGc                                                                                                      <  2:196374/149‑1 (MQ=255)                                                  tCCAAGCGCTCACCATGGACCTGATCAACGCCATTCGCTGCTTCATCAAGGTGGTCGAGGCCGGTAGCATCGCTGCTGGTGCCCGTATTCTCGGCCTCAGTCCGGCAGCCGTCAGCCAGAACCTGGCGCGGCTGGAAGGCCACCTGCaa                                                                                                    <  8:233645/149‑1 (MQ=255)                                                           tCACCATGGACCTGCTCAACGCCATTCGCTGCTTCATCAAGGTGGTCGAGGCCGGTAGCATCGCTGCTGGTGCCCGTATTCTCGGCCTCAGTCCGGCAGCCGTCAGCCAGAACCTGGCGCGGCTGGAAGGCCACCTGCAAGTACGCCTg                                                                                           >  4:295315/1‑149 (MQ=255)                                                            cACCATGGACCTGCTCAACGCCATTCGCTGCTTCATCAAGGTGGTCGAGGCCGGTAGCATCGCTGCTGGTGCCCGTATTCTCGGCCTCAGTCCGGCAGCCGTCAGCCAGAACCTGGCGCGGCTGGAAGGCCACCTGCaa                                                                                                    <  2:37483/139‑1 (MQ=255)                                                            cACCATGGACCTGCTCAACGCCATTCGCTGCTTCATCAAGGTGGTCGAGGCCGGTAGCATCGCTGCTGGTGCCCGTATTCTCGGCCTCAGTCCGGCAGCCGTCAGCCAGAACCTGGCGCGGCTGGAAGGCCACCTGCaa                                                                                                    >  1:37483/1‑139 (MQ=255)                                                            cACCATGGACCTGCTCAACGCCATTCGCTGCTTCATCAAGGTGGTCGAGGCCGGTAGCATCGCTGCTGGTGCCCGTATTCTCGGCCTCAGTCCGGCAGCCGTCAGCCAGAACCTGGCGCGGCTGGAAGGCCACCTGCAAGTACGCCTGc                                                                                          >  7:264600/1‑149 (MQ=255)                                                             aCCATGGACCTGCTCAACGCCATTCGCTGCTTCATCAAGGTGGTCGAGGCCGGTAGCATCGCTGCTGGTGCCCGTATTCTCGGCCTCAGTCCGGCAGCCGTCAGCCAGAACCGGGCGCGGCTGGAAGGCCACCTGCAAGTACGcc                                                                                             >  5:264097/1‑145 (MQ=255)                                                             aCCATGGACCTGCTCAACGCCATTCGCTGCTTCATCAAGGTGGTCGAGGCCGGTAGCATCGCTGCTGGTGCCCGTATTCTCGGCCTCAGTCCGGCAGCCGTCAGCCAGAACCGGGCGCGGCTGGAAGGCCACCTGCAAGTACGcc                                                                                             <  6:264097/145‑1 (MQ=255)                                                                 tGGACCTGCTCAACGCCATTCGCTGCTTCATCAAGGTGGTCGAGGCCGGTAGCATCGCTGCTGGTGCCCGTATTCTCGGCCTCAGTCCGGCAGCCGTCAGCCAGAACCTGGCGCGGCTGGAAGGCCACCTGCAAGTACGCCTGCTCAGc                                                                                     <  3:295315/149‑1 (MQ=255)                                                                         cTCAACGCCATTCGCTGCTTCATCAAGGTGGTCGAGGCCGGTAGCATCGCTGCTGGTGCCCGTATTCTCGGCCTCAGTCCGGCAGCCGTCAGCCAGAACCTGGCGCGGCTGGAAGGCCACCTGCAAGTACGCCTGCTCAGCCGAACcac                                                                             <  8:264600/149‑1 (MQ=255)                                                                                      gctgctTCATCAAGGTGGTCGAGGCCGGTAGCATCGCTGCTGGTGCCCGTATTCTCGGCCTAAGTCCGGCAGCCGTCAGACAGAACCTGGCGCGGCTGGAAGGCCACCTGCAAGTACGCCTGCTCAGCCGAACCACACGCAGCATGGcc                                                                >  2:253004/1‑149 (MQ=255)                                                                                           ttCATCATGGTGGTCGAGGCCGGTAGCATCGCTGCTGGTGCCCGTATTCTCGGCCTCAGTCCGGCAGCCGTCAGCCAGAACCTGGCGCGGCTGGAAGGCCACCTGCAAGTACGCCTGCTCAGCCGCACACCACGCAGCATGGCCCTGAc                                                           >  8:324256/1‑149 (MQ=255)                                                                                           ttCATCAAGGTGGTCGAGGCCGGTAGCATCGCTGCTGGTGCCCGTATTCTCGGCCTCAGTCCGGCAGCCGTCAGCCAGAACCTGGCGCGGCTGGAAGGCCACCTGCAAGTACGCCTGCTCAGCCGAACCACACGCAGCATGGCCCTGAc                                                           >  6:2959/1‑149 (MQ=255)                                                                                            tcatcaAGGTGGTCGAGGCCGGTAGCATCGCTGCTGGTGCCCGTATTCTCGGCCTCAGTCCGGCAGCCGTCAGc                                                                                                                                     >  1:355359/1‑74 (MQ=255)                                                                                            tcatcaAGGTGGTCGAGGCCGGTAGCATCGCTGCTGGTGCCCGTATTCTCGGCCTCAGTCCGGCAGCCGTCAGc                                                                                                                                     <  2:355359/74‑1 (MQ=255)                                                                                             catcaAGGTGGTCGAGGCCGGTAGCATCGCTGCTGGTGCCCGTATTCTCGGCCTCAGTCCGGCAGCCGTCAGCCAGAACCTGGCGCGGCTGGAAGGCCACCTGCAAGTACGCCTGCTCAGCCGAACCACACGCAGCATGGCCCTGACg                                                          <  2:174197/148‑1 (MQ=255)                                                                                              atcaAGGTGGTCGAGGCCGGTAGCATCGCTGCTGGTGCCCGTATTCTCGGCCTCAGTCCGGCAGCCGTCAGCCAGAACCTGGCGCGGCTGGAAGGCCACCTGCAAGTACGCCTGCTCAGCCGAACCACACGCAGCATGGCCCTGACGc                                                         >  4:355073/1‑148 (MQ=255)                                                                                               tcaAGGTGGTCGAGGCCGGTAGCATCGCTGCTGGTGCCCGTATTCTCGGCCTCAGTCCGGCAGCCGTCAGCCAGAACCTGGCGCGGCTGGAAGGCCACCTGCAAGTACGCCTGCTCAGCCGAACCACACGCAGCATGGCCCTGACGCCa                                                       >  3:107932/1‑149 (MQ=255)                                                                                                      gactgaggccgagaatacgggcaccagctgcgatgctaccggcctcAGTCCGGCAGCCGTCAGCCAGAACCTGGCGCGGCTGGAAGGCCACCTGCAAGTACGCCTGCTCAGCCGAACCACACGCAGCATGGCACTGACGCCATCTGgcg                                                >  1:209201‑M2/47‑149 (MQ=255)                                                                                                        ctgaggccgagaatacgggcaccagcagcgatgctaccggcctcAGTCCGGCAGCCGTCAGCCAGAACCTGGCGCGGCTGGAAGGCCACCTGCAAGTACGCCTGCt                                                                                         <  7:313864‑M2/62‑1 (MQ=255)                                                                                                        ctgaggccgagaatacgggcaccagcagcgatgctaccggcctcAGTCCGGCAGCCGTCAGCCAGAACCTGGCGCGGCTGGAAGGCCACCTGCAAGTACGCCTGCt                                                                                         >  8:313864‑M2/45‑106 (MQ=255)                                                                                                         tgaggccgagaatacgggcaccagcagcgatgctaccggcctcAGTCCGGCAGCCGTCAGCCAGAACCTGGCGCGGCTGGAAGGCCACCTGCAAGTACGCCTGCTCAGCCGAACCACACGCAGCATGGCCCTGACGCCATCTGGCGcc                                              >  1:338523‑M2/44‑148 (MQ=255)                                                                                                          GAGGCCGGTAGCATCGCTGCTGGTGCCCGTATTCTCGGCCTCAGTCCGGCAGCCGTCAGCCAGAACCTGGCGCGGCTGGAAGGCCACCTGCAAGTACGCCTGCTCAGCCGAACCACACGCAGCATGGCCCTGACGCCATCTGGCGCCCa                                            >  2:170875‑M1/1‑149 (MQ=255)                                                                                                                       tCGCTGCTGGTGCCCGTATTCTCGGCCTCATTCCGGCAGCCGTCAGCCAGAACCTTGCGCGGCTGGAAGGCCACCTGCAAGTACGCCTGCTCAGCCGAACCACACGCAGCATGGCCCTGACGCCATCTGGCGCCCAGTATTACGAGCgt                               <  3:95081/149‑1 (MQ=255)                                                                                                                       cgggcaccagcagcgatgctaccggcctcAGTCCGGCAGCCGTCAGCCAGAACCTGGCGCGGCTGGAAGGCCACCTGCAAGTACGCCTGCTCAGCCGAACCACACGCAGCATGGCCCTGACGCCATCTGGCGCCCAGTATTACGAGCgt                               <  2:338523‑M2/120‑1 (MQ=255)                                                                                                                         gctgctGGTGCCCGTATTCTCGGCCTCAGTCCGGCAGCCGTCAGCCAGAACCTGGCGCGGCTGGAAGGCCACCTGCAAGTACGCCTGCTCAGCCGAACCACACGCAGCATGGCCCTGACGCCATCTGGCGCCCAGTATTACGAGCgtg                              <  2:339855/148‑1 (MQ=255)                                                                                                                          ctgctgGTGCCCGTATTCTCGGCCTCAGTCCGGCAGCCGTCAGCCAGAACCTGGCGCGGCTGGAAGGCCACCTGCAAGTACGCCTGCTCAGCCGAACCACACGCAGCATGGCCCTGACGCCATCTGGCGCCCAGTATTACGAGCGTGTa                            <  5:2959/149‑1 (MQ=255)                                                                                                                           tgctgGTGCCCGTATTCTCGGCCTCAGTCCGGCAGCCGTCAGCCAGAACCTGGCGCGGCTGGAAGGCCACCTGCAAGTACGCCTGCTCAGCCGAACCACACGCAGCATGGCCCTGACGCCATCTGGCGCCCAGTATTACGAGCGTGTa                            >  2:87411/1‑148 (MQ=255)                                                                                                                             ctgGTGCCCGTATTCTCGGCCTCAGTCCGGCAGCCGTCAGCCAGAACCTGGCGCGGCTGGAAGGCCACCTGCAAGTACGCCTGCTCAGCCGAACCACACGCAGCATGGCCCTGACGCCATCTGGCGCCCAGTATTACGAGCGTGTaaa                          <  1:87411/148‑1 (MQ=255)                                                                                                                              tgGTGCCCGTATTCACGGCCTCAGTCCGGCAGCCGTCAGCCAGAACCTGGCGCGGCTGGAAGGCCACCTGCAAGTACGCCTGCTCAGCCGAACCACACGCAGCATGGCCCTGACGCCATCTGGCGCCCAGTATTACGAGCGTGTAAAg                         >  7:316223/1‑148 (MQ=255)                                                                                                                                gttcccGTATTCTCGGCCTCAGTCCGGCAGCCGTCAGCCAGAACCTGGCGCGGCTGGAAGGCCACCTGCAAGTACGCCTGCTCAGCCGAACCACACGCAGCATGGCCCTGACGCCATCTGGCGCCCAGTATTACGAGCGTGTAAAGCa                       <  7:324256/145‑1 (MQ=255)                                                                                                                                gTGCCCGTATTCTCGGCCTCAGTCCGGCAGCCGTCAGCCAGAACCTGGCGCGGCTGGAAGGCCACCTGCAAGTACGCCTGCTCAGCCGAACCACACGCAGCATGGCCCTGACGCCATCTGGCGCCCAGTATTACGAGCGTGTAAAGCat                      <  3:273896/149‑1 (MQ=255)                                                                                                                                   cccGTATTCTCGGCCTCAGTCCGGCAGCCGTCAGCCAGAACCTGGCGCGGCTGGAAGGCCACCTGCAAGTACGCCTGCTCAGCCGAACCACACGCAGCATGGCCCTGACGCCATCt                                                    <  4:349361/116‑1 (MQ=255)                                                                                                                                   cccGTATTCTCGGCCTCAGTCCGGCAGCCGTCAGCCAGAACCTGGCGCGGCTGGAAGGCCACCTGCAAGTACGCCTGCTCAGCCGAACCACACGCAGCATGGCCCTGACGCCATCt                                                    <  4:343909/116‑1 (MQ=255)                                                                                                                                   cccGTATTCTCGGCCTCAGTCCGGCAGCCGTCAGCCAGAACCTGGCGCGGCTGGAAGGCCACCTGCAAGTACGCCTGCTCAGCCGAACCACACGCAGCATGGCCCTGACGCCATCt                                                    >  3:343909/1‑116 (MQ=255)                                                                                                                                   cccGTATTCTCGGCCTCAGTCCGGCAGCCGTCAGCCAGAACCTGGCGCGGCTGGAAGGCCACCTGCAAGTACGCCTGCTCAGCCGAACCACACGCAGCATGGCCCTGACGCCATCt                                                    >  3:349361/1‑116 (MQ=255)                                                                                                                                    ccGTATTCTCGGCCTCAGTCCGGCAGCCGTCAGCCAGAACCTGGCGCGGCTGGAAGGCCACCTGCAAGTACGCCTGCTCAGCCGAACCACACGCAGCATGGCCCTGACGCCATCTGGCGCCCAGTATTACGAGCGTGTAAAGCATATc                   >  2:207759/1‑148 (MQ=255)                                                                                                                                     cGTATTCTCGGCCTCAGTCCGGCAGCCGTCAGCCAGAACCTGGCGCGGCTGGAAGGCCACCTGCAAGTACGCCTGCTCAGCCGAACCACACGCAGCATGGCCCTGACGCCATCTGGCGCCCAGTATTACGAGCGTGTAAAGCATATc                   >  4:302829/1‑147 (MQ=255)                                                                                                                                          tctcGGCCTCAGTCCGGCAGCCGTCAGCCAGAACCTGGCGCGGCTGGAAGGCCACCTGCAAGTACGCCTGCTCAGCCGAACCACACGCAGCATGGCCCTGACGCCATCTGGCGCCCAGTATTACGAGCGTGTAAAGCATATCGAGCGt             >  2:99822/1‑148 (MQ=255)                                                                                                                                            tcGGCCTCAGTCCGGCAGCCGTCAGCCAGAACCTGGCGCGGCTGGAGGGCCACCTGCAAGTACGCCTGCTCAGCAGAACCACACGCAGCATGGCCCTGACGCCATCTGGCGCCCAGTATTACGAGCGTGTAAAGCATATCGAGCGTGa           >  1:268097/1‑148 (MQ=255)                                                                                                                                            tcGGCCTCAGTCCGGCAGCCGTCAGCCAGAACCTGGCGCGGCTGGAAGGCCACCTGCAAGTACGCCTGCTCAGCCGAACCACACGCAGCATGGCCCTGACGCCATCTGGCGCCCAGTATTACGAGCGTGTAAAGCATATCGAGCGt             <  4:167768/146‑1 (MQ=255)                                                                                                                                            tcGGCCTCAGTCCGGCAGCCGTCAGCCAGAACCTGGCGCGGCTGGAAGGCCACCTGCAAGTACGCCTGCTCAGCCGAACCACACGCAGCATGGCCCTGACGCCATCTGGCGCCCAGTATTACGAGCGTGTAAAGCATATCGAGCGt             >  3:167768/1‑146 (MQ=255)                                                                                                                                            tcGGCCTCAGTCCGGCAGCCGTCAGCCAGAACCTGGCGCGGCTGGAAGGCCACCTGCAAGTACGCCTGCTCAGCCGAACCACACGCAGCATGGCCCTGACGCCATCTGGCGCCCAGTATTACGAGCGTGTAAAGCATATCGAGCGTGa           >  2:277051/1‑148 (MQ=255)                                                                                                                                            tcGGCCTCAGTCCGGCAGCCGTCAGCCAGAACCTGGCGCGCCTGGAAGGCCACCTGCAACTACGCCTGCTAAGCCGAACCACACGCAGCATGGCCCTGACGCCATCTGGCGCCCAGTATTACGAGCGTGTAAAGCATATCGAGCGTGa           >  5:20526/1‑148 (MQ=255)                                                                                                                                                 ctcAGTCCGGCAGCCGTCAGCCAGAACCTGGCGCGGCTGGAAGGCCACCTGCAAGTACGCCTGCTCAGCCGAACCACACGCAGCATGGCCCTGACGCCATCTGGCGCCCAGTATTACGAGCGTGTAAAGCATATCGAGc               <  4:143244‑M2/136‑1 (MQ=255)                                                                                                                                                 ctcAGTCCGGCAGCCGTCAGCCAGAACCTGGCGCGGCTGGAAGGCCACCTGCAAGTACGCCTGCTCAGCCGAACCACACGCAGCATGGCCCTGACGCCATCTGGCGCCCAGTATTACGAGCGTGTAAAGCATATCGAGc               >  3:143244‑M2/4‑139 (MQ=255)                                                                                                                                                  tcAGTCCGGCAGCCGTCAGCCAGAACCTGGCGCGGCTGGAAGGCCACCTGCAAGTACGCCTGCTCAGCCGAACCACACGCAGCATGGCCCTGACGCCATCTGGCGCCCAGTATTACGAGCGTGTAAAGCATATCGAGCGTGATCTGGcc    >  4:209458‑M2/3‑149 (MQ=255)                                                                                                                                                   cAGTCCGGCAGCCGTCAGCCAGAACCTGGCGCGGCTGGAAGGCCACCTGCAAGTACGCCTGCTCAGCCGAACCACACGCAGCATGGCCCTGACGCCATCTGGTGCCCAGTATTACGAGCGTGTAAAGc                        <  6:123847‑M2/127‑1 (MQ=255)                                                                                                                                                   cAGTCCGGCAGCCGTCAGCCAGAACCTGGCGCGGCTGGAAGGCCACCTGCAAGTACGCCTGCTCAGCCGAACCACACGCAGCATGGCCCTGACGCCATCTGGTGCCCAGTATTACGAGCGTGTAAAGc                        >  5:123847‑M2/2‑128 (MQ=255)                                                                                                                                                    aGTCCGGCAGCCGTCAGCCAGAACCTGGCGCGGCTGGAAGGCCACCTGCAAGTACGCCTGCTCAGCCGAACCACACGCAGCATGGCCCTGACGCCATCTGGCGCCCAGTATTACGAGCGTGTAAAGCATATCGAGCGTGATctggccct  >  6:69774/1‑149 (MQ=255)                                                                                                                                                    aGTCCGGCAGCCGTCAGCCAGAACCTGGCGCGGCTGGAAGGCCACCTGCAAGTACGCCTGCTCAGCCGAACCACACGCAGCATGGCCCTGACGCCATCTGGCGCCCAGTATTACGAGCGTGTAAAGCATATCGAGCGTGATctggcc    <  3:302829/147‑1 (MQ=255)                                                                                                                                                    |                                                                                                                                                     CAGCTGTAGACCGGCAGCATTGAGTTCTTTATAAAGAAATTCTTACGAATCCAAGCGCTCACCATGGACCTGCTCAACGCCATTCGCTGCTTCATCAAGGTGGTCGAGGCCGGTAGCATCGCTGCTGGTGCCCGTATTCTCGGCCTCAGTCCGGCAGCCGTCAGCCAGAACCTGGCGCGGCTGGAAGGCCACCTGCAAGTACGCCTGCTCAGCCGAACCACACGCAGCATGGCCCTGACGCCATCTGGCGCCCAGTATTACGAGCGTGTAAAGCATATCGAGCGTGATCTGGCCCT  >  NC_002947/1880264‑1880559

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.