New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 2471790	42 (0.710)	4 (0.070)	4/244	NT	9.0%	coding (177/483 nt)	PP_2166	anti‑anti‑sigma factor
	?	NC_002947	= 2471813	42 (0.770)					coding (200/483 nt)	PP_2166	anti‑anti‑sigma factor

GCAGAGCGGTACCTTCGTACTGAAATTCGTTGGTGAAGTGCGCCTGACCCTGTGTTCGGCGCTGGATGCGACGATCGAGAAGATTTTCACTGCGCTGAACTTCTCGGCGATTGTCATCGAC‑‑CTGACTGAAACCGAGAGTATCGACAGCACCACGCTGGGCCTGCTGGCGAAGCTGTCGATCCTGTCGCGACAGAAGGTGGGCCTGCTGCCGACGGTGGTGACTACCAATCCGGA‑‑CATTTCACGGTTATTGCAGTCGATGGGCTTCGATCAGGTGTTCAACATCGTCGATCGACC  >  NC_002947/2471643‑2471936                                                                                                                                                      |                                                                                                                                                     gCAGAGCGGTACCTTCGTACTGAAATTCTTTTGTTAAGTGCGCCTGACCCTGTGTTCGGCGCTGGATTCGACGATCTATAAGATTTTCACTGCGCTGAACTTCTCGGCGATTGTCATCGAC‑‑CTGACTGAAACCGAGAGTATCGACAGC                                                                                                                                                      <  7:171945‑M1/148‑1 (MQ=255)     agCGGTACCTTCGTACTGAAATTCGTTGGTGAAGTGCGCCTGACCCTGTGTTCGGCGCTGGATGCGACGATCGAGAAGATTTTCACTGCGCTGAACTTCTCGGCGATTGTCATCGAC‑‑CTGACTGAAACCGAGAGTATCGACAGcaccac                                                                                                                                                 >  5:291125/1‑149 (MQ=255)         gTACCTTCGTACTGAAATTCGTTGGTGAAGTGCGCCTGACCCTGTGTTCGGCGCTGGATGCGACGATCGAGAAGATTTTCACTGCGCTGAACTTCTCGGCGATTGTCATCGAC‑‑CTGACTGAAACCGAGAGTATCGACAGCACCACGCTg                                                                                                                                             >  7:285382/1‑149 (MQ=255)             cTTCGTACTGAAATTCGTTGGTGAAGTGCGCCTGACCCTGTGTTCGGCGCTGGATGCGACGATCGAGAAGATTTTCACTGCGCTGAACTTCTCGGCGATTGTCATCGAC‑‑CTGACTGAAACCGAGAGTATCGACAGCttcgccagcaggc                                                                                                                                         >  2:93706‑M1/1‑136 (MQ=255)             cTTCGTACTGAAATTCGTTGGTGAAGTGCGCCTGACCCTGTGTTCGGCGCTGGATGCGACGATCGAGAAGATTTTCACTGCGCTGAACTTCTCGGCGATTGTCATCGAC‑‑CTGACTGAAACCGAGAGTATCGACAGCACCACGCTGGGcc                                                                                                                                         >  8:269783/1‑149 (MQ=255)                  tACTGAAATTCGTTGGTGAAGTGCGCCTGACCCTGTGTTCGGCGCTGGATGCGACGATCGAGAAGATTTTCACTGCGCTGAACTTCTCGGCGATTGTCATCGAC‑‑CTGACTGAAACCGAGAGTATCGACAGCACCACGCTGGGCctgctg                                                                                                                                    <  8:285382/149‑1 (MQ=255)                   aCTGAAATTCGTTGGTGAAGTGCGCCTGACCCTGTGTTCGGCGCTGGATGCGACGATCGAGAAGATTTTCACTGCGCTGAACTTCTCGGCGATTGTCATCGAC‑‑CTGACTGAAACCGAGAGTATCGACAGCACCACGCTGGGCCTGCTgg                                                                                                                                   >  5:262957/1‑149 (MQ=255)                     tGAAATTCGTTGGTGAAGTGCGCCTGACCCTGTGTTCGGCGCTGGATGCGACGATCGAGAAGATTTTCACTGCGCTGAACTTCTCGGCGATTGTCATCGAC‑‑CTGACTGAAACCGAGAGTATCGACAGCACCACGCTGGGCCTGCTGGc                                                                                                                                  >  3:86037/1‑148 (MQ=255)                       aaaTTCGTTGGTGAAGTGCGCCTGACCCTGTGTTCGGCGCTGGATGCGACGATCGAGAAGATTTTCACTGCGCTGAACTTCTCGGCGATTGTCATCGAC‑‑CTGACTGAAACCGAGAGTATCGACAGCACCACGCTGGGCCTGCTGGCg                                                                                                                                 >  5:196754/1‑147 (MQ=255)                       aaaTTCGTTGGTGAAGTGCGCCTGACCCTGTGTTCGGCGCTGGATGCGACGATCGAGAAGATTTTCACTGCGCTGAACTTCTCGGCGATTGTCATCGAC‑‑CTGACTGAAACCGAGAGTATCGACAGCACCACGCTGGGCCTGCTGGCGa                                                                                                                                >  4:300477/1‑148 (MQ=255)                             gTTGGTGAAGTGCGCCTGACCCTGTGTTCGGCGCTGGATGCGACGATCGAGAAGATTTTCACTGCGCTGAACTTCTCGGCGATTGTCATCGAC‑‑CTGACTGAAACCGAGAGTATCGACAGTttcgccagcaggcccagcgtggtgctgtc                                                                                                                         >  8:261961‑M1/1‑120 (MQ=255)                                ggTGAAGTGCGCCTGACCCTGTGTTCGGCGCTGGATGCGACGATCGAGAAGATTTTCACTGCGCTGAACTTCTCGGCGATTGTCATCGAC‑‑CTGACTGAAACCGAGAGTATCGACAGCACCACGCTGGGCCTGCTGGCGAAgctgtcgat                                                                                                                      <  5:150405‑M2/149‑10 (MQ=255)                                  tGAAGTGCGCCTGACCCTGTGTTCGGCGCTGGATGCGACGATCGAGAAGATTTTCACTGCGCTGAACTTCTCGGCGATTGTCATCGAC‑‑CTGACTGAAACCGAGAGTATCGACAGCttcgccagcaggcccagcgtggtgctgtcgatac                                                                                                                    <  1:93706‑M1/149‑35 (MQ=255)                                  tGAAGTGAGCCTGACCCTGTGTTCGGCGCTGGATGCGACGATCGAGAAGATTTTCACTGCGCTGAACTTCTCGGCGATTGTCATCGAC‑‑CTGACTGAAACCGAGAGAATCGACAGCACCACGCTGGGCCTGCTGGCGAAGCTGTCGATca                                                                                                                    >  8:69264/1‑148 (MQ=255)                                     aGTGCGCCTGACCCTGTGTTCGGCGCTGGATGCGACGATCGAGAAGATTTTCACTGCGCTGAACTTCTCGGCGATTGTCATCGAC‑‑CTGACTGAAACCGAGAGTATCGACAGTttcgccagcaggcccagcgtggtgctgtcgatactct                                                                                                                 <  7:261961‑M1/149‑38 (MQ=255)                                        gcgcCTGACCCTGTGTTCGGCGCTGGATGCGACGATCGAGAAGATTTTCACTGCGCTGAACTTCTCGGCGATTGTCATCGAC‑‑CTGACTGAAACCGAGAGTATCGACAGCACCACGCTGGGCCTGCTGGCGAAgc                                                                                                                             <  2:172970‑M2/134‑3 (MQ=255)                                        gcgcCTGACCCTGTGTTCGGCGCTGGATGCGACGATCGAGAAGATTTTCACTGCGCTGAACTTCTCGGCGATTGTCATCGAC‑‑CTGACTGAAACCGAGAGTATCGACAGCACCACGCTGGGCCTGCTGGCGAAgc                                                                                                                             >  1:172970‑M2/1‑132 (MQ=255)                                           ccTGACCCTGTGTTCGGCGCTGGATGCGACGATCGAGAAGATTTTCACTGCGCTGAACTTCTCGGCGATTGTCATCGAC‑‑CTGACTGAAACCGAGAGTATCGACAGCACCACGCTGGGCCTGCTGGCGAAGCTGTCGATCCTGTCGCGAc                                                                                                           <  6:291125/149‑1 (MQ=255)                                               aCCCTGTGTTCGGCGCTGGATGCGACGATCGAGAAGATTTTCACTGCGCTGAACTTCTCGGCGATTGTCATCGAC‑‑CTGACTGAAACCGAGAGTATCGACAGCACCACGCTGGGCCTGCTGGCGAAGCTGTCGATCCTGTCGCGACAGaa                                                                                                       <  6:196754/149‑1 (MQ=255)                                                 ccTGTGTTCGGCGCTGGATGCGACGATCGAGAAGATTTTCACTGCGCTGAACTTCTCGGCGATTGTCATCGAC‑‑CTGACTGAAACCGAGAGTATCGACAGCACCACGCTGGGCCTGCTGGCGAAGCTGTCGATCCTGTCGCGACAGAAgg                                                                                                     >  7:103480/1‑149 (MQ=255)                                                 ccTGTGTTCGGCGCTGGATGCGACGATCGAGAAGATTTTCACTGCGCTGAACTTCTCGGCGATTGTCATCGAC‑‑CTGACTGAAACCGAGAGTATCGACAGCACCACGCTGGGCCTGCTGGCGAAGCTGTCGATCCTGTCGCGACAGAAgg                                                                                                     >  1:159455/1‑149 (MQ=255)                                                 ccTGTGTTCGGCGCTGGATGCGACGATCGAGAAGATTTTCACTGCGCTGAACTTCTCGGCGATTGTCATCGAC‑‑CTGACTGAAACCGAGAGTATCGACAGCACCACGCTGGGCCTGCTGGCGAAGCTGTCGATCCTGTCGCGACAGAAgg                                                                                                     >  4:242235/1‑149 (MQ=255)                                                   tgtgTTCGGCGCTGGATGCGACGATCGAGAAGATTTTCACTGCGCTGCACTTCTCGGCGATTGTCATCGAC‑‑CTGACTGCAACCGAGAGTATCGACAGCACCACGCTGGGCCTGCTGGCGAAGCTGTCGATCCTGTCGCGACAGCAGGTg                                                                                                   >  5:315923/1‑149 (MQ=255)                                                   tgtgTTCGGCGCTGGATGCGACGATCGAGAAGATTTTCACTGCGCTGAACTTCTCGGCGATTGTCATCGAC‑‑CTGACTGAAACCGATAGTATCGACAGCACCACGCTGGGCCTGCTGGCGAAGCTCTCGATACTGTCGCGACAGAAGGtc                                                                                                   >  5:344781/1‑148 (MQ=255)                                                     tgtTCGGCGCTGGATGCGACGATCGAGAAGATTTTCACTGCGCTGAACTTCTCGGCGATTGTCATCGAC‑‑CTGACTGAAACCGAGAGTATCGACAGCACCACGCTGGGCCTGCTGGCGAAGCTGTCGATCCTGTCGCGACAGAAGGTgg                                                                                                  <  7:269783/148‑1 (MQ=255)                                                     tgtTCGGCGCTGGATGCGACGATCGAGAAGATTTTCACTGCGCTGAACTTCTCGGCGATTGTCATCGAC‑‑CTGACTGAAACCGAGAGTATCGACAGCACCACGCTGGGCCTGCTGGCGAAGCTGTCGATCCTGTCGCGACAGAAGGTgg                                                                                                  <  2:159455/148‑1 (MQ=255)                                                     tgtTCGGCGCTGGATGCGACGATCGAGAAGATTTTCACTGCGCTGAACTTCTCGGCGATTGTCATCGAC‑‑CTGACTGAAACCGAGAGTATCGACAGCACCACGCTGGGCCTGCTGGCGAAGCTGTCGATCCTGTCGCGACAGAAGGTgg                                                                                                  <  7:273518/148‑1 (MQ=255)                                                       ttCGGCGCTGGATGCGACGATCGAGAAGATTTTCACTGCGCTGAACTTCTCGGCGATTGTCATCGAC‑‑CTGACTGAAACCGAGAGTATCGACAGCACCACGCTGGGCCTGCTGGCGAAGCTGTCGATCCTGTCGCGACAGAAGGTGGGc                                                                                                <  3:242235/148‑1 (MQ=255)                                                       ttCGGCGCTGGATGCGACGATCGAGAAGATTTTCACTGCGCTGAACTTCTCGGCGATTGTCATCGAC‑‑CTGACTGAAACCGAGAGTATCGACAGCACCACGCTGGGCCTGCTGGCGAAGCTGTCGATCCTGTCGCGACAGAAGGTGGGc                                                                                                <  6:262957/148‑1 (MQ=255)                                                          ggCGCTGGATGCGACGATCGAGAAGATTTTCACTGCGCTGAACTTCTCGGCGATTGTCATCGAC‑‑CTGACTGAAACCGAGAGTATCGACAGCACCACGCTGGGCCTGCTGGCGAAGCTGTCGATCCTGTCGCGACAGAAGGTGGGCctgc                                                                                            >  4:131013/1‑149 (MQ=255)                                                                    gCGACGATCGAGAAGATTTTCACTGCGCTGAACTTCTCGGCGATTGTCATCGAC‑‑CTGACTGAAACCGAGAGTATCGACAGCACCACGCTGGGCCTGCTGGCGAAGCTGTCGATCCTGTCGCGACAGAAGGTGGGCCTGCTGCCGACggt                                                                                  >  2:303848/1‑149 (MQ=255)                                                                          aTCGAGAAGATTTTCACTGCGCTGAACTTCTCGGCGATTGTCATCCCCCACTGACTGAAACCGAGAGTATCGACAGCACCACGCTGGGCCTGCTGGCGAAGCTGTCGATCCTGTCGCGACAGAAGGTGGGCCTGCTGCCGACGgtggtg                                                                              <  1:308077/149‑1 (MQ=255)                                                                           tCGAGAAGATTTTCACTGCGCTGAACTTCTCGGCGATTGTCATCGAC‑‑CTGACTGAAACCGAGAGTATCGACAGCACCACGCTGGGCCTGCTGGCGAAGCTGTCGATCCTGTCGCGACAGAAGGTGGGCCTGCTGCCGACGGTGGTGACt                                                                           <  3:131013/149‑1 (MQ=255)                                                                              agtagaTTTTCAGTGGGCTGAACTTCTCGGGGATTGTCATCGAC‑‑CTGACTGAAACCGAGAGTTTCGACAGCACCACGCTGGGCCTGCTGTCGAAGTTGTCGATCCTGTCGCGACAGAAGGTGGGCCTGCTGCCGACGGTGGTGACTAc                                                                         <  6:344781/145‑1 (MQ=255)                                                                               gaagaTTTTCACTGCGCTGAACTTCTCGGCGATTGTCATCGAC‑‑CTGACTGAAACCGAGAGTATCGACAGCACCACGCTGGGCCTGCTGGCGAAGCTGTCGATCCTGTCGCGACAGAAGGTGGGCCTGCTGCCGACGGTGGTGACTAcc                                                                        >  5:10315/1‑148 (MQ=255)                                                                                       tCACTGCGCTGAACTTCTCGGCGATTGTCATCGAC‑‑CTGACTGAAACCGAGAGTATCGACAGCACCACGCTGGGCCTGCTGGCGAAGCTGTCGATCCTGTCGCGACAGAAGGTGGGCCTGCTGCCGACGGTGGTGACTACCAATCCGGa                                                                <  3:300477/148‑1 (MQ=255)                                                                                              gcTGAACTTCTCGGCGATTGTCATCGAC‑‑CTGACTGAAACCGAGAGTATCGACAGCACCACGCTGGGCCTGCTGGCGAAGCTGTCGATCCTGTCGCGACAGAAGGTGGGCCTGCTGCCGACGGTGGTGACTACCAATCCGGA‑‑CATTTCAc                                                      <  6:246531/149‑1 (MQ=255)                                                                                                    cTTCTCGGCGATTGTCATCGAC‑‑CTGACTGAAACCGAGAGTATCGACAGCACCACGCTGGGCCTGCTGGCGAAGCTGTCGATCCTGTCGCGACAg                                                                                                         >  5:167232/1‑94 (MQ=255)                                                                                                    cTTCTCGGCGATTGTCATCGAC‑‑CTGACTGAAACCGAGAGTATCGACAGCACCACGCTGGGCCTGCTGGCGAAGCTGTCGATCCTGTCGCGACAg                                                                                                         <  6:167232/94‑1 (MQ=255)                                                                                                        tcGGCGATTGTCATCGAC‑‑CTGACTGAAACCGAGAGTATCGACAGCACCACGCTGGGCCTGCTGGCGAAGCTGTCGATCCTGTCGCGAGAGAAGGTGGGCCTGCTGCCGACGGTGGTGACTACCAATCCGGA‑‑CATTTCACGGTTATTg                                              >  4:211812/1‑147 (MQ=255)                                                                                                         cGGCGATTGTCATCGAC‑‑CTGACTGAAACCGAGAGTATCGACAGCACCACGCTGGGCCTGCTGGCGAAGCTGTCGATCCTGTCGCGACAGAAGGTGGGCCTGCTGCCGACGGTGGTGACTAACAATCCGGA‑‑CATTTAACGGTTATTGCAg                                           >  2:290878/1‑149 (MQ=255)                                                                                                          ggCGATTCTCATCGCC‑‑CTGACTGAACCCGAGAGTATCGACAGCACCACGCTGGGCCTGCTGGCGAAGCTGGCGATCCTGTCGCGACAGACGGTGGGCCTGCTGCCGACGGTGGTGACTACCAATCCGGA‑‑CATTTCACGGTTATTGCa                                            <  8:103480/147‑1 (MQ=255)                                                                                                                 gTCATCGAC‑‑CTGACTGAAACCGAGAGTATCGACAGCACCACGCTGGGCCTGCTGGCGAAGCTGTCGATCCTGTCGCGACAGAAGGTGGGCCTGCTGCCGACGGTGGTGACTACCAATCCGGA‑‑CATTTCACGGTTATTGCAGTCGATgg                                    <  7:110487/148‑1 (MQ=255)                                                                                                                  tCATCGAC‑‑CTGACTGAAACCGAGAGTATCGACAGCACCACGCTGGGCCTGCTGGCGAAGCTGTCGATCCTGTCGCGACAGAAGGTGGGCCTGCTGCCGACGGTGGTGACTACCAATc                                                                    <  8:48681/117‑1 (MQ=255)                                                                                                                  tCATCGAC‑‑CTGACTGAAACCGAGAGTATCGACAGCACCACGCTGGGCCTGCTGGCGAAGCTGTCGATCCTGTCGCGACAGAAGGTGGGCCTGCTGCCGACGGTGGTGACTACCAATc                                                                    >  7:48681/1‑117 (MQ=255)                                                                                                                                 tgaAACCGAGAGTATCGACAGCACCACGCTGGGCCTGCTGGCGAAGCTGTCGATCCTGTCGCGACAGAAGGTGGGCCTGCTGCCGACGGTGGTGACTACCAATCCGGA‑‑CATTTCACGGTTATTGCAGTCGATGGGCTTCGATCAGgtgt                     >  5:312050/1‑149 (MQ=255)                                                                                                                                      ccGAGAGTATCGACAGCACCACGCTGGGCCTGCTGGCGAAGCTGTCGATCCTGTCGCGACAGAAGGTGGGCCTGCTGCCGACGGTGGTGACTACCAATCCGGA‑‑CATTTCACGGTTATTGCAGTCGATGGGCTTCGATCAGgt                       <  6:280719/142‑1 (MQ=255)                                                                                                                                      ccGAGAGTATCGACAGCACCACGCTGGGCCTGCTGGCGAAGCTGTCGATCCTGTCGCGACAGAAGGTGGGCCTGCTGCCGACGGTGGTGACTACCAATCCGGA‑‑CATTTCACGGTTATTGCAGTCGATGGGCTTCGATCAGgt                       >  5:280719/1‑142 (MQ=255)                                                                                                                                       cGAGAGTATCGACAGCACCACGCTGGGCCTGCTGGCGAAGCTGTCGATCCTGTCGCGACAGAAGGTGGGCCTGCTGCCGACGGTGGTGACTACCAATCCGGA‑‑CATTTCACGGTTATTGCAGTCGATGGGCTTCGATCAGGTGTTCAACa               >  5:249677/1‑149 (MQ=255)                                                                                                                                         agagTATCGACAGCACCACGCTGGGCCTGCTGGCGAAactgtcgatactctcggtttcagtcaggtcgatgacaatcgccgagaagttcagcgcagtgaaaatcttctcgatcgtcgcatccagcgccgaacacagggtcaggcgcact               <  7:261961‑M2/149‑113 (MQ=255)                                                                                                                                         agagTATCGACAGCACCACGCTGGGCCTGCTGGCGAAGCTGTCGATCCTGTCGCGACAGAAGGTGGGCCTGCTGCCGACGGTGGTGACTACCAATCCGGA‑‑CATTTCACGGTTATTGCAGTCGATGGGCTTCGATCAGGTGTTCAACAtc             >  7:95578/1‑149 (MQ=255)                                                                                                                                            gTATCGACAGCACCACGCTGGGCCTGCTGGCGAAgctgtcgatactctcggtttcagtcaggtcgatgacaatcgccgagaagttcagcgcagtgaaaatcttctcgatcgtcgcatccagcgccgaacacagggtcaggcgcacttca            <  1:93706‑M2/149‑116 (MQ=255)                                                                                                                                              aTCGACAGCttcgccagcaggcccagcgtggtgctgtcgatactctcggtttcagtcaggtcgatgacaatcgccgagaagttcagcgcagtgaaaatcttctcgatcgtcgcatccagcgccgaacacagggtcaggcgcacttcacc          <  5:150405‑M1/149‑141 (MQ=255)                                                                                                                                               tCGACAGCACCACGCTGGGCCTGCTGGCGAAGCTGTCGATCCTGTCGCGACAGAAGGTGGGCCTGCTGCCGACGGTGGTGACTACCAATCCGGA‑‑CATTTCACGGTTATTGCAGTCGATGGGCTTCGATCAGGTGTTCAACATCGtcga        <  8:95578/148‑1 (MQ=255)                                                                                                                                                 gACAGCACCACGCTGGGCCTGCTGGCGAAactgtcgatactctcggtttcagtcaggtcgatgacaatcgccgagaagttcagcgcagtgaaaatcttctcgatcgtcgcatccagcgccgaacacagggtcaggcgcacttcaccaac       >  8:261961‑M2/1‑29 (MQ=255)                                                                                                                                                  aCAGCACCACGCTGGGCCTGCTGGCGAAGCTGTCGATCCTGTCGCGACAGAAGGTGGGCCTGCTGCCGACGGTGGTGACTACCAATCCGGA‑‑CATTTCACGGTTATTGCAGTCGATGGGCTTCGATCAGGTGtt                    >  4:336265/1‑133 (MQ=255)                                                                                                                                                  aCAGCACCACGCTGGGCCTGCTGGCGAAGCTGTCGATCCTGTCGCGACAGAAGGTGGGCCTGCTGCCGACGGTGGTGACTACCAATCCGGA‑‑CATTTCACGGTTATTGCAGTCGATGGGCTTCGATCAGGTGtt                    <  3:336265/133‑1 (MQ=255)                                                                                                                                                  aCAGCACCACGCTGGGCCTGCTGGCGAAGCTGTCGATCCTGTCGCGACAGAAGGTGGGCCTGCTGCCGACGGTGGTGACTACCAATCCGGA‑‑CATTTCACGGTTATTGCAGTCGATGGGCTTCGATCAGGTGTTCAACATCGtcgatcga    >  2:134864/1‑149 (MQ=255)                                                                                                                                                    aGCACCACGCTGGGCCTGCTGGCGAAGCTGTCGATCCTGTCGCGACAGAAGGTGGGCCTGCTGCCGACGGTGGTGACTACCAATCCGGA‑‑CATTTCACGGTTATTGCAGTCGATGGGCTTCGATCAGGTGTTCAACATCGTCGATCGAcc  >  5:48368/1‑149 (MQ=255)                                                                                                                                                     tcaccacGCTGGGCCTGCTGGCGAAGCTGTCGATCCTGTCGCGACAGAAGGTGGGCCTGCTGCCGACGGTGGTGACTACCAATCCGGACCCATTTCACGGTTATTGCAGTCGATGGGCTTCGATCAGGTGTTCAACATCGTCGATCGAc   <  1:290878/148‑1 (MQ=255)                                                                                                                                                     gCttcgccagcaggcccagcgtggtgctgtcgatactctcggtttcagtcaggtcgatgacaatcgccgagaagttcagcgcagtgaaaatcttctcgatcgtcgcatccagcgccgaacacagggtcaggcgc                  <  2:172970‑M1/134‑133 (MQ=255)                                                                                                                                                     gCttcgccagcaggcccagcgtggtgctgtcgatactctcggtttcagtcaggtcgatgacaatcgccgagaagttcagcgcagtgaaaatcttctcgatcgtcgcatccagcgccgaacacagggtcaggcgc                  >  1:172970‑M1/1‑2 (MQ=255)                                                                                                                                                      |                                                                                                                                                     GCAGAGCGGTACCTTCGTACTGAAATTCGTTGGTGAAGTGCGCCTGACCCTGTGTTCGGCGCTGGATGCGACGATCGAGAAGATTTTCACTGCGCTGAACTTCTCGGCGATTGTCATCGAC‑‑CTGACTGAAACCGAGAGTATCGACAGCACCACGCTGGGCCTGCTGGCGAAGCTGTCGATCCTGTCGCGACAGAAGGTGGGCCTGCTGCCGACGGTGGTGACTACCAATCCGGA‑‑CATTTCACGGTTATTGCAGTCGATGGGCTTCGATCAGGTGTTCAACATCGTCGATCGACC  >  NC_002947/2471643‑2471936

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.