New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	2879841 =	59 (1.000)	4 (0.070)	4/248	NT	7.4%	coding (224/900 nt)	PP_2534	LysR family transcriptional regulator
	?	NC_002947	2879921 =	44 (0.790)					coding (144/900 nt)	PP_2534	LysR family transcriptional regulator

CAGCACTTGCGGGTAGCGTGCGCTGAAGGCCGCCAGCAGCGGCACTACGGTCAACCGGGCATGGCCCAGCGCAGCGCTGACCCGCAAGCGCCCGCGTGGCACGCCTTGGTCAGTGATGGCTTCT‑TCCACTTCGAGCATGTCCGCCAGCACCCGCCGTGCACCGCGCAGGTAGGCCTCTCCCTCGGGGGTAAGGGTGAGCGCCCGGGTCGTGCGCAGCAGCAGGCGGGTACCCAGGCGCTGTTCGGTGCGGGCGAGAATGCGGCTGACCGCCGAGGGCGTCAGGCCTAGCGCTCGGGC  >  NC_002947/2879693‑2879989                                                                                                                                                      |                                                                                                                                                     cAGCACTTTCGGGTAGCGTGCGCTGAAGGCCGCCAGCAGCGGCACTACGGTCAACCGGGCATGGCCCAGCGCAGCGCTGACCCGCAAGCGCCCGCGTGGCACGCCTTGGTCAGTGATGGCTTCT‑TCCACTTCGAGCATGTCCGCCAGCa                                                                                                                                                      <  3:26820/149‑1 (MQ=255)    aaatggacttcggtggcagatccggcgagatggagatttttgccaaggtggcgcaagcgggcagcctgtctgctgccgcccgagcgctaggcctgacgccctcggcggtcagccgcattctcgcccgcaccgaacagcgcctgggtAcc                                                                                                                                                    <  6:158595‑M1/3‑1 (MQ=255)    aaatggacttcggtggcagatccggcgagatggagatttttgccaaggtggcgcaagcgggcagcctgtctgctgccgcccgagcgctaggcctgacgccctcggcggtcagccgcattctcgcccgcaccgaacagcgcctgggtAcc                                                                                                                                                    <  3:110408‑M1/3‑1 (MQ=255)     aatggacttcggtggcagatccggcgagatggagatttttgccaaggtggcgcaagcgggcagcctgtctgctgccgcccgagcgctaggcctgacgccctcggcggtcagccgcattctcgcccgcaccgaacagcgcctgggtatcc                                                                                                                                                   >  3:132407‑M1/146‑146 (MQ=255)     aCTTGCGGGTAGCGTGCGCTGAAGGCCGCCAGCAGCGGCACTACGGTCAACCGGGCATGGCCCAGCGCAGCGCTGACCCGCAAGCGCCCGCGTGGCACGCCTTGGTCAGTGATGGCTTCT‑TCCACTTCGAGCATGTCCGCCAGCACccg                                                                                                                                                  >  3:202631/1‑149 (MQ=255)       ttGCGGGTAGCGTGCGCTGAAGGCCGCCAGCAGCGGCACTACGGTCAACCGGGCATGGCCCAGCGCAGCGCTGACCCGCAAGCGCCCGCGTGGCACGCATTGGTCAGTGATGGCTTCT‑TCCACTTCGAGCATGTCCGCCAGCACccgcc                                                                                                                                                >  8:230556/1‑149 (MQ=255)        ggacttcggtggcagatccggcgagatggagatttttgccaaggtggcgcaagcgggcagcctgtctgctgccgcccgagcgctaggcctgacgccctcggcggtcagccgcattctcgcccgcaccgaacagcgcctgggtACccgcc                                                                                                                                                <  8:199270‑M1/7‑1 (MQ=255)             gTAGCGTGCGCTGAAGGCCGCCAGCAGCGGCACTACGGTCAACCGGGCATGGCCCAGCGCAGCGCTGACCCGCAAGCGCCCGCGTGGCACGCCTTGGTCAGTGATGGCTTCT‑TCCACTTCGAGCATGTCCGCCAGCACCCGCCGTGCAc                                                                                                                                          >  8:11155/1‑149 (MQ=255)             gTAGCGTGCGCTGAAGGCCGCCAGCAGCGGCACTACGGTCAACCGGGCATGGCCCAGCGCAGCGCTGACCCGCAAGCGCCCGCGTGGCACGCCTTGGTCAGTGATGGCTTCT‑TCCACTTCGAGCATGTCCGCCAGCACCCGCCGTGCAc                                                                                                                                          <  7:11155/149‑1 (MQ=255)                gCGTGCGCTGAAGGCCGCCAGCAGCGGCACTACGGTCAACCGGGCATGGCCCAGCGCAGCGCTGACCCGCAAGCGCCCGCGTGGCACGCCTTGGTCAGTGATGGCTTCT‑TCCACTTCGAGCATGTCCGCCAGCACCCGCCGTGCACcgc                                                                                                                                       <  5:144233/149‑1 (MQ=255)                    gcgcTGAAGGCCGCCAGCAGCGGCACTACGGTCAACCGGGCATGGCCCAGCGCAGCGCTGACCCGCAAGCGCCCGCGTGGCACGCCTTGGTCAGTGATGGCTTCT‑TCCACTTCGAGCATGTCCGCCAGCACCCGCCGTGCACCGCGCAg                                                                                                                                   <  7:223137/149‑1 (MQ=255)                       cTGAAGGCCGCCAGCAGCGGCACTACGGTCAACCGGGCATGGCCCAGCGCAGCGCTGACCCGCAAGCGCCCGCGTGGCACGCCTTGGTCAGTGATGGCTTCT‑TCCACTTCGAGCATGTCCGCCAGCACCCGCCGTGCACCGCGCAGGTa                                                                                                                                <  1:138666/149‑1 (MQ=255)                        tGAAGGCCGCCAGCAGCGGCACTACGGTCAACCGGGCATGGCCCAACGCAGCGCTGACCCGCAAGCGCCCGCGTGGCACGCCTTGGTCAGTGATGGCTTCT‑TCCACTTCGAGCATGTCCGCCAGCACCCGCCGTGCACCGCGCAGGTAg                                                                                                                               >  2:106439/1‑149 (MQ=255)                          aaGGCCGCCAGCAGCGGCACTACGGTCAACCGGGCATGGCCCAGCGCAGCGCTGACCCGCAAGCGCCCGCGTGGCACGCCTTGGTCAGTGATGGCTTCT‑TCCACTTCGAGCATGTCCGCCAGCACCCGCCGTGCACCGCGCGGGTAGGc                                                                                                                             >  7:349119/1‑149 (MQ=255)                             gccgccAGCAGCGGCACTACGGTCAACCGGGCATGGCCCAGCGCAGCGCTGACCCGCAAGCGCCCGCGTGGCACGCCTTGGTCAGTGATGGCTTCT‑TCCACTTCGAGCATGTCCGCCAGCACCCGCCGTGCACCGCGCAGGTAGGCctc                                                                                                                          >  3:323117/1‑149 (MQ=255)                                gatggagatttttgccaaggtggcgcaagcgggcagcctgtctgctgccgcccgagcgctaggcctgacgccctcggcggtcagccgcattctcgcccgcaccgaacagcgcctgggtACCCGCCGTGCACCGCGCAGGTAGGCCtctc                                                                                                                        <  2:143556‑M1/31‑1 (MQ=255)                                  cagcagCGGCACTACGGTCAACCGGGCATGGCCCAGCGCAGCGCTGACCCGCAAGCGCCCGCGTGGCACGCCTTGGTCAGTGATGGCTTCT‑TCCACTTCGAGCATGTCCGCCAGCACCCGCCGTGCACCGCGCAGGTAGGCCTCTCCCt                                                                                                                     >  6:235895/1‑149 (MQ=255)                                    gcagcGGCACTACGGTCAACCGGGCATGGCCCAGCGCAGCGCTGACCCGCAAGCGCCCGCGTGGCCCGCCTTGGTCAGTGATGGCTTCT‑TCCACTTCGAGCATGTCCGCCAGCACCCGCCGTGCCCCCCGCAGGTAGGCCTCTCCCTCg                                                                                                                   >  2:135242/1‑149 (MQ=255)                                    gcagcGGCACTACGGTCAACCGGGCATGGCCCAGCGCAGCGCTGACCCGCAAGCGCCCGCGTGGCACGCCTTGGTCAGTGATGGCTTCT‑TCCACTTCGAGCATGTCCGCCAGCACCCGCCGTGCACCGCGCAGGTAGGCCTCTCCCTCg                                                                                                                   >  7:168358/1‑149 (MQ=255)                                      agcGGCACTACGGTCAACCGGGCATGGCCCAACGCAGCGCTGACCCGCAAGCGCCCGCGTGGCACGCCTTGGTCAGTGATGGCTTCTCACCACTTCGAGCATGTCCGCCAGCACCCGCCGTGCACCGCGCAGGTAGGCCTCTCCCTCgg                                                                                                                  <  1:106439/149‑1 (MQ=255)                                       gcGGCACTACGGTCAACCGGGCATGGCCCAGCGCAGCGCTGACCCGCAAGCGCCCGCGTGGCACGCCTTGGTCAGTGATGGCTTCT‑TCCACTTCGAGCATGTCCGCCAGCACCCGCCGTGCACCGCGCGGGTAGGCCTCTCCCTCgggg                                                                                                                <  8:349119/149‑1 (MQ=255)                                       gcGGCACTACGGTCAACCGGGCATGGCCCAGCGCAGCGCTGACCCGCAAGCGCCCGCGTGGCACGCCTTGGTCAGTGATGGCTTCT‑TCCACTTCGAGCATGTCCGCCAGCACCCGCCGTGCACCGCGCAGGTAGGCCTCTCCCTCgggg                                                                                                                >  7:47581/1‑149 (MQ=255)                                       gcGGCACTACGGTCAACCGGGCATGGCCCAGCGCAGCGCTGACCCGCAAGCGCCCGCGTGGCACGCCTTGGTCAGTGATGGCTTCT‑TCCACTTCGAGCATGTCCGCCAGCACCCGCCGTGCACCGCGCAGGTAGGCCTCTCCCTCgggg                                                                                                                <  3:204627/149‑1 (MQ=255)                                       gcGGCACTACGGTCAACCGGGCATGGCCCAGCGCAGCGCTGACCCGCAAGCGCCCGCGTGGCACGCCTTGGTCAGTGATGGCTTCT‑TCCACTTCGAGCATGTCCGCCAGCACCCGCCGTGCACCGCGCAGGTAGGCCTCTCCCTCgggg                                                                                                                <  4:110714/149‑1 (MQ=255)                                        cGGCACTACGGTCAACCGGGCATGGCCCAGCGCAGCGCTGACCCGCAAGCGCCCGCGTGGCACGCCTTGGTCAGTGATGGCTTCT‑TCCACTTCGAGCATGTCCGCCAGCACCCGCCGTGCACCGCGCAGGTAGGCCTCTCCCTCggggg                                                                                                               >  6:305452/1‑149 (MQ=255)                                         ggCACTACGGTCAACCGGGCATGGCCCAGCGCAGCGCTGACCCGCAAGCGCCCGCGTGGCACGCCTTGGTCAGTGATGGCTTCT‑TCCACTTCGAGCATGTCCGCCAGCACCCGCCGTGCACCGCGCAGGTAGGCCTCTCCCTCggggg                                                                                                               >  3:120159/1‑148 (MQ=255)                                          gCACTACGGTCAACCGGGCATGGCCCAGCGCAGCGCTGACCCGCAAGCGCCCGCGTGGCACGCCTTGGTCAGTGATGGCTTCT‑TCCACTTCGAGCATGTCCGCCAGCACCCGCCGTGCACCGCGCAGGTAGGCCTCTCCCTCGGGGGt                                                                                                              >  3:91399/1‑148 (MQ=255)                                             cTACGGTCAACCGGGCATGGCCCAGCGCAGCGCTGACCCGCAAGCGCCCGCGTGGCACGCCTTGGTCAGTGATGGCTTCT‑TCCACTTCGAGCATGTCCGCCAGCACCCGCCGTGCACCGCGCAGGTAGGCCTCTCCCTCGGGGGTAAgg                                                                                                          <  8:47581/149‑1 (MQ=255)                                             cTACGGTCAACCGGGCATGGCCCAGCGCAGCGCTGACCCGCAAGCGCCCGCGTGGCACGCCTTGGTCAGTGATGGCTTCT‑TCCACTTCGAGCATGTCCGCCAGCACCCGCCGTGCACCGCGCAGGTAGGCCTCTCCCTCGGGGGTAAgg                                                                                                          <  5:305452/149‑1 (MQ=255)                                               aCGGTCAACCGGGCATGGCCCAGCGCAGCGCTGACCCGCAAGCGCCCGCATGGCACGCCTTGGTCAGTGATGGCTTCT‑TCCACTTCGAGCATGTCCGCCAGCACCCGCCGTGCACCGCGCAGGTAGGCCTCTCCCTCGGGGGTAAGGGt                                                                                                        >  1:272382/1‑149 (MQ=255)                                                 ggTCAACCGGGCATGGCCCAGCGCAGCGCTGACCCGCAAGCGCCCGCGTGGCACGCCTTGGTCAGTGATGGCTGCT‑TCCACTTCGAGCATGTCCGCCAGCACCCGCCGTGCACCGCGCAGGTAGGCCTCTCCCTCGGGGGTAAGGGTGa                                                                                                      <  6:95345/149‑1 (MQ=255)                                                 ggTCAACCGGGCATGGCCCAGCGCAGCGCTGACCCGCAAGCGCCCGCGTGGCACGCCGTGGTCAGTGATGGCTTCT‑TCCACTTCGTGCATGTCCGCCAGCACCCGCCGTGCACCGCGCAGGTAGGCCTCTCCCTCGGGGGTAAGGGTGa                                                                                                      <  6:209145/149‑1 (MQ=255)                                                  gTCAACCGGGCATGGCCCAGCGCAGCGCTGACCCGCAAGCGCCCGCGTGGCACGCCTTGGTCAGTGATGGCTTCT‑TCCACTTCGAGCATGTCCGCCAGCACCCGCCGTGCACCGCGCAGGTAGGCCTCTCCCTCGGGGGTAAGGGTGAg                                                                                                     >  7:147367/1‑149 (MQ=255)                                                  gTCAACCGGGCATGGCCCAGCGCAGCGCTGACCCGCAAGCGCCCGCGTGGCACGCCTTGGTCAGTGATGGCTTCT‑TCCACTTCGAGCATGTCCGCCAGCACCCGCCGTGCACCGCGCAGGTAGGCCTCTCCCTCGGGGGTAAGGGTGAg                                                                                                     >  4:120745/1‑149 (MQ=255)                                                          ggCATGGCCCAGCGCAGCGCTGACCCGCAAGCGCCCGCGTGGCACGCCTTGGTCAGTGATGGCTTCT‑TCCACTTCGAGCATGTCCGCCAGCACCCGCCGTGCACCGCGCAGGTAGGCCTCTCCCTCGGGGGTAAGGGTGAGCGCCCggg                                                                                             <  4:323117/149‑1 (MQ=255)                                                               ggCCCAGCGCAGCGCTGACCCGCAAGCGCCCGCGTGGCACGCCTTGGTCAGTGATGGCTTCT‑TCCACTTCGAGCATGTCCGCCAGCACCCGCCGTGCACCGCGCAGGTAGGCCTCTCCCTCGGGGGTAAGGGTGa                                                                                                      <  4:315278/135‑1 (MQ=255)                                                               ggCCCAGCGCAGCGCTGACCCGCAAGCGCCCGCGTGGCACGCCTTGGTCAGTGATGGCTTCT‑TCCACTTCGAGCATGTCCGCCAGCACCCGCCGTGCACCGCGCAGGTAGGCCTCTCCCTCGGGGGTAAGGGTGa                                                                                                      >  3:315278/1‑135 (MQ=255)                                                                   cagcgcagcgCTGACCCGCAAGCGCCCGCGTGGCACGCCTTGGTCAGTGATGGCTTCT‑TCGACTTCGAGCATGTCCGCCAGCACCCGCCGTGCACCGCGCAGGTAGGCCTCTCCCTCGGGGGTAAGGGTGAGCGCCCGGGTCGGGCgca                                                                                    <  4:202631/149‑1 (MQ=255)                                                                       gcagcgcTGACCCGCAAGCGCCCGCGTGGCACGCCTTGGTCAGTGATGGCTTCT‑TCCACTTCGAGCATGTCCGCCAGCACCCGCCGTGCACCGCGCAGGTAGGCCTCTCCCTCGGGGGTAAGGGTGAGCGCCCGGGTCGTGCgcagcag                                                                                <  3:126465/149‑1 (MQ=255)                                                                               gACCCGCAAGCGCCCGCGTGGCACGCCTTGGTCAGTGATGGCTTCT‑TCCACTTCGAGCATGTCCGCCAGCACCCGCCGTGCACCGCGCAGGTAGGCCTCTCCCTCGGGGGTAAGGGTGAGCGCCCGGGTCGTGCGCAGCAGCAGGCggg                                                                        >  5:247541/1‑149 (MQ=255)                                                                                aCCCGCAAGCGCCCGCGTGGCACGCCTTGGTCAGTGATGGCTTCT‑TCCACTTCGAGCATGTCCGCCAGCACCCGCCGTGCACCGCGCAGGTAGGCCTCTCCCTCGGGGGTAAGGGTGAGCGCCCGGGTCGTGCGCAGCAGCAGGCgg                                                                         <  6:78095/147‑1 (MQ=255)                                                                                aCCCGCAAGCGCCCGCGTGGCACGCCTTGGTCAGTGATGGCTTCT‑TCCACTTCGAGCATGTCCGCCAGCACCCGCCGTGCACCGCGCAGGTAGGCCTCTCCCTCGGGGGTAAGGGTGAGCGCCCGGGTCGTGCGCAGCAGCAGGCgg                                                                         <  8:168358/147‑1 (MQ=255)                                                                                aCCCGCAAGCGCCCGCGTGGCACGCCTTGGTCAGTGATGGCTTCT‑TCCACTTCGAGCATGTCCGCCAGCACCCGCCGTGCACCGCGCAGGTAGGCCTCTCCCTCGGGGGTAAGGGTGAGCGCCCGGGTCGTGCGCAGCAGCAGGCgg                                                                         <  4:120159/147‑1 (MQ=255)                                                                                   ccgagcgctaggcctgacgccctcggcggtcagccgcattctcgcccgcaccgaacagcgcctgggtACCCGCCGTGCACCGCGCAGGTAGGCCTCTCCCTCGGGGGTAAGGGTGAGCGCCCGGGTCGTGCGCAGCAGCAGGCGGGTAc                                                                     >  2:28413‑M1/68‑149 (MQ=255)                                                                                   cGCAAGCGCCCGCGTGGCACGCCTTGGTCAGTGATGGCTTCT‑TCCACTTCGAGCATGTCCGCCAGCACCCGCCGTGCACCGCGCAGGTAGGCCTCTCCCTCGGGGGTAAGGGTGAGCGCCCGGGTCGTGCGCAGCAGCAGGCGGGTAcc                                                                    <  3:47099/149‑1 (MQ=255)                                                                                    gCAAGCGCCCGCGTGGCACGCCTTGGTCAGTGATGGCTTCT‑TCCACTTCGAGCATGTCCGCCAGCACCCGCCGTGCACCGCGCAGGTAGGCCTCTCCCTCgggg                                                                                                                <  6:315448/104‑1 (MQ=255)                                                                                    gCAAGCGCCCGCGTGGCACGCCTTGGTCAGTGATGGCTTCT‑TCCACTTCGAGCATGTCCGCCAGCACCCGCCGTGCACCGCGCAGGTAGGCCTCTCCCTCgggg                                                                                                                >  5:315448/1‑104 (MQ=255)                                                                                    cgagcgctaggcctgacgccctcggcggtcagccgcattctcgcccgcaccgaacagcgcctgggtACCCGCCGTGCACCGCGCAGGTAGGCCTCTCCCTCGGGGGTAAGGGTGAGCGCCCGGGTCGTGCGCAGCAGCAGGCGGGTAcc                                                                    >  1:143556‑M1/67‑149 (MQ=255)                                                                                     gagcgctaggcctgacgccctcggcggtcagccgcattctcgcccgcaccgaacagcgcctgggtACCCGCCGTGCACCGCGCAGGTAGGCCTCTCCCTCGGGGGTAAGGGTGAGCGCCCGGGTCGTGCGCAGCAGCAGGCGGGTAccc                                                                   >  5:193252‑M1/66‑149 (MQ=255)                                                                                          gcCCGCGTGGCACGCCTTGGTCAGTGATGGCTTCT‑TCCACTTCGAGCATGTCCGCCAGCACCCGCCGTGCACCGCGCAGGTAGGCCTCTCCCTCGGGGGTAAGGGTGAGCGCCCGGGTCGTGCGCAGCAGCAGGCGGGTACCCAGgcgc                                                             >  4:119207/1‑149 (MQ=255)                                                                                                   gCACGCCTTGGTCAGTGATGGCTTCT‑TCCACTTCGAGCATGTCCGCCAGCACCCGCCGTGCACCGCGCAGGTAGGCCTCTCCCTCGGGGGTAAGGGAGAGCGCCCGGGTCGTGCGCAGCTGCAGGCGGGTTCCCACGAGCTGTTCGGTg                                                    >  7:345359/1‑149 (MQ=255)                                                                                                    cACGCCTTGGTCAGTGATGGCTTCT‑TCCACTTCGAGCATGTCCGCCAGCACCCGCCGTGCACCGCGCAGGTAGGCCTCTCCCTCGGGGGTAAGGGTGAGCGCCCGGGTCGTGCGCAGCAGCAGGCGGGTACCCAGGCGCTGTTCGGTGc                                                   >  7:322537/1‑149 (MQ=255)                                                                                                       gCCTTGGTCAGTGATGGCTTCT‑TCCACTTCGAGCATGTCCGCCAGCACCCGCCGTGCACCGCGCAGGTAGGCCTCTCCCTCGGGGGTAAGGGTGAGCGCCCGGGTCGTGCGCAGCAGCAGGCGGGTACCCAGGCGCTGTTCGGTGCggg                                                >  3:76803/1‑149 (MQ=255)                                                                                                        ccTTGGTCAGTGATGGCTTCT‑TCCACTTCGAGCATGTCCGCCAGCACCCGCCGTGCACCGCGCAGGTAGGCCTCTCCCTCGGGGGTAAGGGTGAGCGCCCGGGTCGTGCGCAGCAGCAGGCGGGTACCCAGGCGCTGTTCGGTGCGGGc                                               >  1:343017/1‑149 (MQ=255)                                                                                                         cTTGGTCAGTGATGGCTTCT‑TCCACTTCGAGCATGTCCGCCAGCACCCGCCGTGCACCGCGCAGGTAGGCCTCTCCCTCGGGGGTAAgg                                                                                                          >  2:51994/1‑89 (MQ=255)                                                                                                                  tGATGGCTTCT‑TCCACTTCGAGCATGTCCGCCAGCACCCGCCGTGCACCGCGCAGGTAGGCCTCTCCCTCGGGGGTAAGGGTGAGCGCCCGGGTCGTGCGCAGCAGCAGGCGGGTACCCAGGCGCTGTTCGGTGCGGGCGAGAATGCgg                                     <  2:272382/149‑1 (MQ=255)                                                                                                                    aTGGCTTCT‑TCCACTTCGAGCATGTCCGCCAGCACCCGCCGTGCACCGCGCAGGTAGGCCTCTCCCTCGGGGGTAAGGGTGAGCGCCCGGGTCGTGCGCAGCAGCAGGCGGGTACCCAGGCGCTGTTCGGTGCGGGCGAGAATGCGGCt                                   >  8:246976/1‑149 (MQ=255)                                                                                                                      ggCTTCT‑TCCACTTCGAGCATGTCCGCCAGCACCCGCCGTGCACCGCGCAGGTAGGCCTCTCCCTCGGGGGTAAGGGTGAGCGCCCGGGTCGTGCGCAGCAGCAGGCGGGTACCCAGGCGCTGTTCGGTGCGGGCGAGAATGCGGCTGa                                 >  5:187891/1‑149 (MQ=255)                                                                                                                               ccACTTCGAGCATGTCCGCCAGCACCCGCCGTGCACCGCGCAGGTAGGCCTCTCCCTCGGGGGTAAGGGTGAGCGCCCGGGTCGTGCGCAGCAGCAGGCGGGTACCCAGGCGCTGTTCGGTGCGGGCGAGAATGCGGCTGACCGCCGa                          <  4:91399/148‑1 (MQ=255)                                                                                                                                cACTTCGAGCATGTCCGCCAGCACCCGCCGTGCACCGCGCAGGTAGGCCTCTCCCTCGGGGGTAAGGGTGAGCGCCCGGGTCGTGCGCAGCAGCAGGCGGGTACCCAGGCGCTGTTCGGTGCGGGCGAGAATGCGGCTGACCGCCGAgg                        >  5:158595/1‑149 (MQ=255)                                                                                                                                      gAGCATGTCCGCCAGCACCCGCCGTGCACCGCGCAGGTAGGCCTCTCCCTCGGGGGTAAGGGTGAGCGCCCGGGTCGTGCGTAGCAGCAGGCGGGTACCCAGGCGCTGTTCGGTGCGGGCGAGAATGCGGCTGACCGCCGAGGGCGTCa                  <  3:120745/149‑1 (MQ=255)                                                                                                                                      gAGCATGTCCGCCAGCACCCGCCGTGCACCGCGCAGGTAGGCCTCTCCCTCGGGGGTAAGGGTGAGCGCCCGGGTCGTGCGCAGCAGCAGGCGGGTACCCAGGCGCTGTTCGGTGCGGGCGAGAATGCGGCTGACCGCCGAGGGCGTc                   <  7:230556/148‑1 (MQ=255)                                                                                                                                      gAGCATGTCCGCCAGCACCCGCCGTGCACCGCGCAGGTAGGCCTCTCCCTCGGGGGTAAGGGTGAGCGCCCGGGTCGTGCGCAGCAGCAGGCGGGTACCCAGGCGCTGTTCGGTGCGGGCGAGAATGCGGCTGACCGCCGAGGGCGTCa                  <  5:235895/149‑1 (MQ=255)                                                                                                                                        gCATGTCCGCCAGCACCCGCCGTGCACCGCGCAGGTAGGCCTCTCCCTCGGGGGTAAGGGTGAGCGCCCGGGTCGTGCGCAGCAGCAGGCGGGTACCCAGGCGCTGTTCGGTGCGGGCGAGAATGCGGCTGACCGCCGAGGGCGTCAgg                >  5:134067/1‑149 (MQ=255)                                                                                                                                         cATGTCCGCCAGCACCCGCCGTGCACCGCGCAGGTAGGCCTCTCCCTCGGGGGTAAGGGTGAGCGCCCGGGTCGTGCGCAGCAGCAGGCGGGTACCCAGGCGCTGTTCGGTGCGGGCGAGAATGCGGCTGACCGCCGAGGGCGTCAGGc               >  8:38631/1‑149 (MQ=255)                                                                                                                                             tCCGCCAGCACCCGCCGTGCACCGCGCAGGTAGGCCTCTCCCTCGGGGGTAAGGGTGAGCGCCCGGGTCGTGCGCAGCAGCAGGCGGGTACCCAGGCGCTGTTCGGTGCGGGCGAGAATGCGGCTGACCGCCGAGGGCGTCAGGCCTa            <  4:122737/148‑1 (MQ=255)                                                                                                                                               cGCCAGCACCCGCCGTGCACCGCGCAGGTAGGCCTCTCCCTCGGGGGTAAGGGTGAGCGCCCGGGTCGTGCGCAGCAGCAGGCGGGTACCCAGGCGCTGTTCGGTGCGGGCGAGAATGCGGCTGACCGCCGAGGGCGTCAGGCCTAgcg         >  8:135962/1‑149 (MQ=255)                                                                                                                                               cGCCAGCACCCGCCGTGCACCGCGCAGGTAGGCCTCTCCCTCGGGGGTAAGGGTGAGCGCCCGGGTCGTGCGCAGCAGCAGGCGGGTACCCAGGCGCTGTTCGGTGCGGGCGAGAATGCGGCTGACCGCCGAGGGCGTCAGGCCTAgcg         >  5:128918/1‑149 (MQ=255)                                                                                                                                                gCCAGCACCCGCCGTGCACCGCGCAGGTAGGCCTCTCCCTCGGGGGTAAGGGTGAGCGCCCGGGTCGTGCGCAGCAGCAGGCGGGTACCCAGGCGCTGTTCGGTGCGGGCGAGAATGCGGCTGACCGCCGAGGGCGTCAGGCCTAgcgc        >  6:266175/1‑149 (MQ=255)                                                                                                                                                    gCACCCGCCGTGCACCGCGCAGGTAGGCCTCTCCCTCGGGGGTAAGGGTGAGCGCCCGGGTCGTGCGCAGCAGCAGGCGGGTACCCAGGCGCTGTTCGGTGCGGGCGAGAATGCGGCTGACCGCCGAGGGCGTCAGGCCTAGCGCTCgg    >  7:81612/1‑149 (MQ=255)                                                                                                                                                      ACCCGCCGTGCACCGCGCAGGTAGGCCTCTCCCTCGGGGGTAAGGGTGAGCGCCCGGGTCGTGCGCAGCAGCAGGCGGGTACCCAGGCGCTGTTCGGTGCGGGCGAGAATGCGGCTGACCGCCGAGGGCGTCAGGCCTAGCGCTCGggc  >  6:187891‑M1/1‑149 (MQ=255)                                                                                                                                                      |                                                                                                                                                     CAGCACTTGCGGGTAGCGTGCGCTGAAGGCCGCCAGCAGCGGCACTACGGTCAACCGGGCATGGCCCAGCGCAGCGCTGACCCGCAAGCGCCCGCGTGGCACGCCTTGGTCAGTGATGGCTTCT‑TCCACTTCGAGCATGTCCGCCAGCACCCGCCGTGCACCGCGCAGGTAGGCCTCTCCCTCGGGGGTAAGGGTGAGCGCCCGGGTCGTGCGCAGCAGCAGGCGGGTACCCAGGCGCTGTTCGGTGCGGGCGAGAATGCGGCTGACCGCCGAGGGCGTCAGGCCTAGCGCTCGGGC  >  NC_002947/2879693‑2879989

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.