New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 3854146	66 (1.120)	3 (0.050)	3/248	NT	5.2%	coding (49/396 nt)	PP_3402	hypothetical protein
	?	NC_002947	= 3854217	46 (0.830)					intergenic (‑23/+98)	PP_3402/PP_3403	hypothetical protein/quercetin 2,3‑dioxygenase

AAGCAGGCCTGCTCGATCAGTTGCCGCATCTCTAGCATAGAAACGCCTATCAACGACATGGTACGACCCTCTCTGTGGGATGGCCTGTTGTATGGAAGTACGCCTTTGTCGGGCGGGGCGCCAATTGATATTGCGCATGCTCGGCCAGCTGACCATGCTCCCCGGCAATGAGCATGCGGGGAATCCTCTAGCACCTTAGTGGAAGATTCCCCGCGGCGGCCGAGTGTTCGAATGCATTAGCAGACTTAACGACGAGTGGTCTCGGTCAACTAGGCGTTGGCCAGGCCCCAGCC  >  NC_002947/3854001‑3854293                                                                                                                                                  |                                                                                                                                                    aaGCAGGCCTGCTCGATCAGTTGCCGCATCTCTAGCATAGAAACGCCTATCAACGACATGGTACGACCCTCTCTGTGGGATGGCCTGTTGTATGGAAGTACGCCTTTGTCGGGCGGGGCGCCAATTGATATTGCGCATGCTCGGCCAGc                                                                                                                                                  >  3:56789/1‑149 (MQ=255)   gCAGGCCTTCTCGATCAGTTGCCGCATCTCTAGCATAGAAACGCCTATCAACGACATGGTACGACCCTCTCTGTGGGATGGCCTGTTGTATGGAAGTACGCCTTTGTCGGGCGGGGCGCCAATTGATATTGCGCATGCTCGGCCAGCt                                                                                                                                                 >  7:135979/1‑148 (MQ=255)       gCCTGCTCGATCGGTTGCCGCATCTCTAGCATAGAAACGCCTATCAAAGACATGGTACGACCCTCTCTGTGGGATGGCCTGTTGTATGGAAGTACGCCTTTGTCGGGCGGGGCGCCAATAGATATTGCGCATGCTCGGCCAGCTGACCa                                                                                                                                            >  7:135377/1‑149 (MQ=255)         cttcTCGATCAGTTGCCGCATCTCTAGCATAGAAACGCCTATCAACGACATGGTACGACCCTCTCTGTGGGATGGCCTGTTGTATGGAAGTACGCCTTTGTCGGGCGGGGCGCCAATTGATATTGCGCATGCTCGGCCAGCTGACCATg                                                                                                                                          <  8:135979/146‑1 (MQ=255)         cTGCTCGATCAGTTGCCGCATCTCTAGCATAGAAACGCCTATCAACGACATGGTACGACCCTCTCTGTGGGATGGCCTGTTGTATGGAAGTACGCCTTTGTCGGGCGGGGCGCCAATTGATATTGCGCATGCTCGGCCAGCTGACCATg                                                                                                                                          >  7:54668/1‑149 (MQ=255)           gCTCGATCAGTTGCCGCATCTCTAGCATAGAAACGCCTATCAACGACATGGTACGACCCTCTCTGTGGGATGGCCTGTTGTATGGAAGTACGCCTTTGTCGGGCGGGGCGCCAATTGATATTGCGCATGCTCGGCCAGCTGACCATGCt                                                                                                                                        >  6:353917/1‑149 (MQ=255)               gATCAGTTGCCGCATCTCTAGCATAGAAACGCCTATCAACGACATGGTACGACCCTCTCTGTGGGATGGCCTGTTGTATGGAAGTACGCCTTTGTCGGGCGGGGCGCCAATTGATATTGCGCATGCTCGGCCAGCTGACCaaggcgag                                                                                                                                     >  6:182285/1‑141 (MQ=255)               gATCAGTTGCCGCATCTCTAGCATAGAAACGCCTATCAACGACATGGTACGACCCTCTCTGTGGGATGGCCTGTTGTATGGAAGTACGCCTTTGTCGGGCGGGGCGCCAATTGATATTGCGCATGCTCGGCCAGCTGACCATGCTcccc                                                                                                                                    <  3:315601/149‑1 (MQ=255)                 tCAGTTGCCGCATCTCTAGCATAGAAACGCCTATCAACGACATGGTACGACCCTCTCTGTGGGATGGCCTGTTGTATGGAAGTACGCCTTTGTCGGGCGGGGCGCCAATTGATATTGCGCATGCTCGGCCAGCTGACCATGCTCCCCgg                                                                                                                                  >  1:90062/1‑149 (MQ=255)                    gTTGCCGCATCTCTAGCATAGAAACGCCTATCAACGACATGGTACGACCCTCTCTGTGGGATGGCCTGTTGTATGGAAGTACGCCTTTGTCGGGCGGGGCGCCAATTGATATTGCGCATGCTCGGCCAGCTGACCATGCTCCCCGGCaa                                                                                                                               >  4:67243/1‑149 (MQ=255)                     tttcagCATATCTAGCATCGACACGCCTATCAACGACATGGTACTCCCCTCTCTTTGGGATGGCCTGTTGTATGGAAGTACGCCTTTGTCGGGCGGGGCGCCAATTGATATTGCGCATGCTCGGCCAGCTGACCATGCTCCCCGGCAAt                                                                                                                              <  8:342255/144‑1 (MQ=255)                     ttGCCGCATCTCTAGCATAGAAACGCCTATCAACGACATGGTACGACCCTCTCTGTGGGATGGCCTGTTGTATGGAAGTACGCCTTTGTCGGGCGGGGCGCCAATTGATATTGCGCATGCTCGGCCAGCTGACCATGCTCCCCGGCAAt                                                                                                                              <  3:67243/149‑1 (MQ=255)                     ttGCCGCATCTCTAGCATAGAAACGCCTATCAACGACATGGTACGACCCTCTCTGTGGGATGGCCTGTTGTATGGAAGTACGCCTTTGTCGGGCGGGGCGCCAATTGATATTGCGCATGCTCGGCCAGCTGACCATGCTCCCCGGCAAt                                                                                                                              >  2:327608/1‑149 (MQ=255)                     tgtccGCATCTCTAGCCTAGAAACGCCTAGCAACGACATGGTACGACCCTCTCTGTGGGATGGCCTGTTGTATGGAAGTACGCCTTTGTCGGGCGGGGCGCCAATTGATATTGCGCATGCTCGGCCAGCTGACCATGCTCCCCGGCAAt                                                                                                                              <  8:347056/146‑1 (MQ=255)                       gCCGCATCTCTAGCATAGAAACGCCTATCAACGACATGGTACGACCCTCTCTGTGGGATGGCCTGTTGTATGGAAGTACGCCTTTGTCGGGCGGGGCGCCAATTGATATTGCGCATGCTCGGCCAGCTGACCATGCTCCCCGGCAAt                                                                                                                              >  2:43939/1‑147 (MQ=255)                        ccGCATCTCTAGCATAGAAACGCCTATCAACGACATGGTACGACCCTCTCTGTGGGATGGCCTGTTGTATGGAAGTACGCCTTTGTCGGGCGGGGCGCCAATTGATATTGCGCATGCTCGGCCAGCTGACCATGCTCCCCGGCAATGa                                                                                                                            <  6:191005/148‑1 (MQ=255)                        ccGCATCTCTAGCATAGAAACGCCTATCAACGACATGGTACGACCCTCTCTGTGGGATGGCCTGTTGTATGGAAGTACGCCTTTGTCGGGCGGGGCGCCAATTGATATTGCGCATGCTCGGCCAGCTGACCATGCTCCCCGGCAATGa                                                                                                                            <  4:8199/148‑1 (MQ=255)                          gCATCTCTAGCATAGAAACGCCTATCAACGACATGGTACGACCCTCTCTGTGGGATGGCCTGTTGTATGGAAGTACGCCTTTGTCGGGCGGGGCGCCAATTGATATTGCGCATGCTCGGCCAGCTGAc                                                                                                                                              <  2:132848/128‑1 (MQ=255)                          gCATCTCTAGCATAGAAACGCCTATCAACGACATGGTACGACCCTCTCTGTGGGATGGCCTGTTGTATGGAAGTACGCCTTTGTCGGGCGGGGCGCCAATTGATATTGCGCATGCTCGGCCAGCTGAc                                                                                                                                              >  1:132848/1‑128 (MQ=255)                           cATCTCTAGCATAGAAACGACTATAAACGACATGGTACGACCCTCTCTGTGGGATGGCATGTTGTATGGAAGTACTCCTTAGTCGGGCGGGGCGCCAATTGATATTGCGCATGCTCGGCCAGCTGACCATGCTCCCCGGCAATGAGCAt                                                                                                                        >  7:72426/1‑149 (MQ=255)                            aTCTCTAGCATAGAAACGCCTATCAACGACATGGTACGACCCTCTCTGTGGGATGGCCTGTTGTATGGAAGTACGCCTTTGTCGGGCGGGGCGCCAATTGATATTGCGCATGCTCGGCCAGCTGACCATGCTCCCCGGCAATGAGCATg                                                                                                                       <  5:367210/149‑1 (MQ=255)                                 tAGCATAGAAACGCCTATCAACGACATGGTACGACCCTCTCTGTGGGATGGCCTGTTGTATGGAAGTACGCCTTTGTCGGGCGGGGCGCCAATTGATATTGCGCATGCTCGGTCAGCTGACCATGCTCCCCGGCAATGAGCATGc                                                                                                                      <  1:43939/145‑1 (MQ=255)                                 aaGCATCGCAACGCCTATCATCGACATGGTACGACCCTCTCGTTGGGTTGGCCTGTTGTATGGAAGTACGCCTTTGCAGGGCGGGGCGCCAATTGATATTGCGCATGCGGGGCCAGCTGACCATGCTCGCCGGCAATGAGAATGc                                                                                                                      <  8:263238/144‑1 (MQ=255)                                   gcctAGAAACGCCTAGCAACGACATCGTACGACCCTCTCTGTGGGATGGCCTGTTGTATGGAAGTACGCCTTTGTCGGGCGGGGCGCCACTTGATATTGCGCATGCTCGGCCAGCTGACCATGCTCCCCGGCAATGAGCATGCGGGGaa                                                                                                                <  7:259397/146‑1 (MQ=255)                                     aTAGAAACGCCTATCAACGACATGGTACGACCCTCTCTGTGGGATGGCCTGTTGTATGGAAGTACGCCTTTGTCGGGCGGGGCGCCAATTGATATTGCGCATGCTCGGCCAGCTGACCATGCTCCCCGGCAATGAGCATGCgg                                                                                                                    >  3:297074/1‑143 (MQ=255)                                     aTAGAAACGCCTATCAACGACATGGTACGACCCTCTCTGTGGGATGGCCTGTTGTATGGAAGTACGCCTTTGTCGGGCGGGGCGCCAATTGATATTGCGCATGCTCGGCCAGCTGACCATGCTCCCCGGCAATGAGCATGCgg                                                                                                                    <  4:297074/143‑1 (MQ=255)                                     aTAGAAACGCCTATCAACGACATGGTACGACCCTCTCTGTGGGATGGCCTGTTGTATGGAAGTACGCCTTTGTCGGGCGGGGCGCCAATTGATATTGCGCATGCTCGGCCAGCTGACCATGCTCCCCGGCAATGAGCATGCGGGGAATc                                                                                                              <  4:57625/149‑1 (MQ=255)                                         aaaCGCCTATCAACGACATGGTACGACCCTCTCTGTGGGATGGCCTGTTGTATGGAAGTACGCCTTTGTCGGGCGGGGCGCCAATTGATATTGCGCATGCTCGGCCAGCTGACCATGTTCCCCGGCAATGAGCATGCGGGGAATCctc                                                                                                           >  6:216134/1‑148 (MQ=255)                                          aaCGCCTATCAACGACATGGTACGACCCTCTCTGTGGGATGGCCTGTTGTATGGAAGTACGCCTTTGTCGGGCGGGGCGCCAATTGATATTGCGCATTCTCGGCCAGCTGACCGTGCTCCCCGGCAATGAGCATGCGGGGAATCCTCTa                                                                                                         <  2:104588/149‑1 (MQ=255)                                              ccTATCAACGACATGGTACGACCCTCTCTGTGGGATGGCCTGTTGTATGGAAGTACGCCTTTGTCGGGCGGGGCGCCAATTGATATTGCGCATGCTCGGCCAGCTGACCATGCTCCTCGGCAATGAGCATGCGGGGAATCCTCTAGCAc                                                                                                     <  8:54668/149‑1 (MQ=255)                                                  tCAACGACATGGTACGACCCTCTCTGTGGGATGGCCTGTTGTATGGAAGTACGCCTTTGTCGGGCGGGGCGCCAATTGATATTGCGCATGCTCGGCCAGCTGACCATGCTCCCCGGCAATGAGCATGCGGGGAATCCTCTAGCACCt                                                                                                   <  1:147702/147‑1 (MQ=255)                                                    aaCGACATGGTACGACCCTCTCTGTGGGATGGCCTGTTGTATGGAAGTACGCCTTTGTCGGGCGGGGCGCCAATTGATATTGCGCATGCTCGGCCAGCTGACCATGCTCCCCGGCAATGAGCATGCgg                                                                                                                    >  6:74563/1‑128 (MQ=255)                                                    aaCGACATGGTACGACCCTCTCTGTGGGATGGCCTGTTGTATGGAAGTACGCCTTTGTCGGGCGGGGCGCCAATTGATATTGCGCATGCTCGGCCAGCTGACCATGCTCCCCGGCAATGAGCATGCgg                                                                                                                    <  5:74563/128‑1 (MQ=255)                                                      cGACATGGTACGACCCTCTCTGTGGGATGGCCTGTTGTATGGAAGTACGCCTTTGTCGGGCGGTGCGCCAATTGATATTGCGCATGCTCGGCCAGCTGACCATGCTCCCCGGCAATGAGCATTCGGGGAATCCTCTAGCACCTTAGTgg                                                                                             <  2:304758/149‑1 (MQ=255)                                                       gACATGGTACGACCCTCTCTGTGGGATGGCCGGTTGTATGGAAGTACGCCTTTGTCGGGCGGGGCGCCAATTGATATTGCGCATGCTCGGCCAGCTGACCATGCTCCCCGGCAATGAGCATGCGGGGAATCCTCTAGCACCTTAGTGGa                                                                                            <  8:56452/149‑1 (MQ=255)                                                        aCATGGTACGACCCTCTCTGTGGGATGGCCTGTTGTATGGAAGTACGCCTTTGTCGGGCGGGGCGCCAATTGATATTGCGCATGCTCGGCCAGCTGACCATGCTCCCCGGCAATGAGCATGCGGGGAATCCTCTAGCACCTTAGTGGaa                                                                                           <  4:299623/149‑1 (MQ=255)                                                        aCATGGTACGACCCTCTCTGTGGGATGGCCTGTTGTATGGAAGTACGCCTTTGTCGGGCGGGGCGCCAATTGATATTGCGCATGCTCGGCCAGCTGACCATGCTCCCCGGCAATGAGCATGCGGGGAATCCTCTAGCACCTTAGTGGaa                                                                                           <  2:90062/149‑1 (MQ=255)                                                          aTGGTACGACCCTCTCTGTGGGATGGCCTGTTGTATGGAAGTACGCCTTTGTCGGGCGGGGCGCCAATTGATATTGCGCATGCTCGGCCAGCTGACCATGCTCCCCGGCAATGAGCATGCTGGGAATCCTCTAGCACCTTAGTgg                                                                                             >  8:262620/1‑145 (MQ=255)                                                              tACGACCCTCTCTGTGGGATGGCCTGTTGTATGGAAGTACGCCTTTGTCGGGCGGGGCGCCAATTGATATTGCGCATGCTCGGCCAGCTGACCATGCTCCCCGGCAATGAGCATGCGGGGAATCCTCTAGCACCTTa                                                                                                 <  2:277256/137‑1 (MQ=255)                                                              tACGACCCTCTCTGTGGGATGGCCTGTTGTATGGAAGTACGCCTTTGTCGCGCGGGGCGCCAATTGATATTGCGCATGCTCGGCCAGCTGACCATGCTCCCCGGCAATGAGCATGCGGGGAATCCTCTAGCACCTTa                                                                                                 >  1:277256/1‑137 (MQ=255)                                                                   cccTCTCTGTGGGATGGCCTGTTGTATGGAAGTACGCCTTTGTCGGGCGGGGCGCCAATTGATATTGCGCATGCTCGGCCAGCTGACCATGCTCCCCGGCAATGAGCATGCGGGGAATCCTCTAGCACCTTAGTGGAAGATTCCCcgcg                                                                                >  7:11286/1‑149 (MQ=255)                                                                    ccTCTCTGTGGGATGGCCTGTTGTATGGAAGTACGCCTTTGTCGGGCGGGGCGCCAATTGATATTGCGCATGCTCGGCCAGCTGACCATGCTCCCCGGCAATGAGCATGCGGGGAATCCTCTAGCACCTTAGTGGAAGATTCCCCgcgg                                                                               >  3:304783/1‑149 (MQ=255)                                                                       ctctGTGGGATGGCCTGTTGTATGGAAGTACGCCTTTGTCGGGCGGGGCGCCAATTGATATTGCGCATGCTCGGCCAGCTGACCATGCTCCCCGGCAATGAGCATGCGGGGAATCCTCTAGCACCTTAGTGGAAGATTCCCCGCGGCgg                                                                            <  5:141956‑M2/149‑3 (MQ=255)                                                                          tgtgGGATGGCCTGTTGTATGGAAGTACGCCTTTGTCGGGCGGGGCGCCAATTGATATTGCGCATGCTCGGCCAGCTGACCATGCTCCCCGGCAATGAGCATGCGGGGAATCCTCTAGCACCTTAGTGGAAGATTCCCCGCGGCggcc                                                                          <  6:322892‑M2/148‑5 (MQ=255)                                                                            tgGGATGGCCTGTTGTATGGAAGTACGCCTTTGTCGGGCGGGGCGCCAATTGATATTGCGCATGCTCGGCCAGCTGACCATGCTCCCCGGCAATGAGCATGCGGGGAATCCTCTAGCACCTTAGTGGAAGATTCCCCGCGGCggccga                                                                        >  4:56789‑M2/1‑142 (MQ=255)                                                                             gggATGGCCTGTTGTATGGAAGTACGCCTTTGTCGGGCGGGGCGCCAATTGATATTGCGCATGCTCGGCCAGCTGACCATGCTCCCCGGCAATGAGCATGCGGGGAATCCTCTAGc                                                                                                       >  8:254460/1‑116 (MQ=255)                                                                             gggATGGCCTGTTGTATGGAAGTACGCCTTTGTCGGGCGGGGCGCCAATTGATATTGCGCATGCTCGGCCAGCTGACCATGCTCCCCGGCAATGAGCATGCGGGGAATCCTCTAGc                                                                                                       <  7:254460/116‑1 (MQ=255)                                                                             gggATGGCCTGTTGTATGGAAGTACGCCTTTGTCGGGCGGGGCGCCAATTGATATTGCGCATGCTCGGCCAGCTGACCATGCTCCCCGGCAATGAGCATGCGGGGAATCCTCTAGCACCTTAGTGGAAGATTCCCCGCGGCGGCCGAgt                                                                      >  5:193030/1‑149 (MQ=255)                                                                                aTGGCCTGTTGTATGGAAGTACGCCTTTGTCGGGCGGGGCGCCAATTGATATTGCGCATGCTCGGCCgccgcggggaatcttccactaaggtgctagaggattccccgcatgctcattgccggggagcatggtcagctggccgagcatg                                                                   <  5:33385‑M1/149‑83 (MQ=255)                                                                                  ggCCTGTTGTATGGAAGTACGCCTTTGTCGGGCGGGGCGCCAATTGATATTGCGCATGCTCGGCCAGCTGACCATGCTCCCCGGCAATGAGCATGCGGGGAATCCTCTAGCACCTTAGTGGAAGATTCCCCGCGGCGGCCGAGTGTTc                                                                  <  4:304783/148‑1 (MQ=255)                                                                                     cTGTTGTATGGAAGTACGCCTTTGTCGGGCGGGGCGCCAATTGATATTGCGCATGCTCGGCCgccgcggggaatcttccactaaggtgctagaggattccccgcatgctcattgccggggagcatggtcagctggccgagcat                                                                    >  6:248604‑M1/1‑62 (MQ=255)                                                                                     cTGTTGTATGGAAGTACGCCTTTGTCGGGCGGGGCGCCAATTGATATTGCGCATGCTCGGCCgccgcggggaatcttccactaaggtgctagaggattccccgcatgctcattgccggggagcatggtcagctggccgagcat                                                                    <  5:248604‑M1/143‑82 (MQ=255)                                                                                     cTGTTGTATGGAAGTACGCCTTTGTCGGGCGGGGCGCCAATTGATATTGCGCATGCTCGGCCAGCTGACCATGTTCCCCGGCAATGAGCATGCGGGGAATCCTCTAGCACCTTAGTGGAAGATTCCCCGCGGCGGCCGAGTGTTCGAAt                                                              <  5:216134/149‑1 (MQ=255)                                                                                          gtATGGAAGTACGCCTTTGTCGGGCGGGGCGCCAATTGATATTGCGCATGCTCGGCCAGCTGACCATGCTCCCCGGCAATGAGCATGCGGGGAATCCTCTAGCACCTTAGTGGAAGATTCCCCGCGGCGGCCGAGTGTTCGAATGCAt                                                          >  2:136019/1‑148 (MQ=255)                                                                                           tATGGAAGTACGCCTTTGTCGGGCCGGGCGCGAATTGATCTTGCCCATGCTCCGCCAGCTGACCATGCTCCCCGGCAATGAGCATGCGGGGAATCCTCTTGCACCTTCGTGGAAGATTCCCGTCGGCGGCCGAGTGTTCGAATGCATTa                                                        <  8:135377/149‑1 (MQ=255)                                                                                             tGGAAGTACGCCTTTGTCGGGCGGGGCGCCAATTGATATTGCGCATGCTCGGCCAGCTGACCATGCTCCCCGGCAATGAGCATGCGGGGAATCCTCTAGCACCTTAGTGGAAGATTCCCCGCGGCGGCCGAGTGTTCGAATGCa                                                           >  3:138743/1‑144 (MQ=255)                                                                                             tGGAAGTACGCCTTTGTCGGGCGGGGCGCCAATTGATATTGCGCATGCTCGGCCAGCTGACCATGCTCCCCGGCAATGAGCATGCGGGGAATCCTCTAGCACCTTAGTGGAAGATTCCCCGCGGCGGCCGAGTGTTCGAATGCa                                                           <  4:138743/144‑1 (MQ=255)                                                                                             tGGAAGTACGCCTTTGTCGGGCGGGGCGCCAATTGATATTGCGCATGCTCGGCCAGCTGACCATGCTCCCCGGCAATGAGCATGCGGGGAATCCTCTAGCACCTTAGTGGAAGATTCCCCGCGGCGGCCGAGTGTTCGAATGCATTAg                                                       >  3:11704/1‑148 (MQ=255)                                                                                                aaGTACGCCTTTGTCGGGCGGGGCGCCAATTGATATTGCGCATGCTCGGCCAGCTGACCATGCTCCCCGGCAATGAGCATGCGGGGAATCCTCTAGCACCTTAGTGGAAGATTCCCCGCGGCGGCCGAGTGTTCGAATGCATTAGCAGa                                                   <  6:141956/149‑1 (MQ=255)                                                                                                      gCCTTTGTCGGGCGGGGCGCCAATTGATATTGCGCATGCTCGGCCAGCTGACCATGCTCCCCGGCAATGAGCATGCg                                                                                                                     <  6:284456/77‑1 (MQ=255)                                                                                                      gCCTTTGTCGGGCGGGGCGCCAATTGATATTGCGCATGCTCGGCCAGCTGACCATGCTCCCCGGCAATGAGCATGCg                                                                                                                     >  5:284456/1‑77 (MQ=255)                                                                                                      gCCTTTGTCGGGCGGGGCGCCAATTGATATTGCGCATGCTCGGCCAGCTGACCATGCTCCCCGGCAATGAGCATGCGGGGAATCCTCTAGCACCTTAGTGGAAGATTCCCCGCGGCGGCCGAGTGTTCGAATGCATTAGCAGACTTAac                                             <  1:136019/149‑1 (MQ=255)                                                                                                            gTCGGGCGGGGCGCCAATTGATATTGCGCATGCTCGGCCAGCTGACCATGCTCCCCGGCAATGAGCATGCGGGGAATCCTCTAGCACCTTAGTGGAAGATTCCCCGCGGCGGCCGAGTGTTCGAATGCATTAGCAGACTTAAcgacga                                        <  8:11286/148‑1 (MQ=255)                                                                                                             tCGGGCGGGGCGCCAATTGATATTGCGCATGCTCGGCCAGCTGACCATGCTCCCCGGCAATGAGCATGCGGGGAATCCTCTAGCACCTTAGTGGAAGATTCCCCGCGGCGGCCGAGTGTTCGAATGCATTAGCAGACTTAACGACGAGt                                      <  5:322892/149‑1 (MQ=255)                                                                                                               gggcggggcgCCAATTGATATTGCGCATGCTCGGCCAGCTGACCATGCTCCCCGGCAATGAGCATGCGGGGAATCCTCTAGCACCTTAGTGGAAGATTCCCCGCGGCGGCCGAGTGTTCGAATGCAt                                                          >  6:61039/1‑127 (MQ=255)                                                                                                               gggcggggcgCCAATTGATATTGCGCATGCTCGGCCAGCTGACCATGCTCCCCGGCAATGAGCATGCGGGGAATCCTCTAGCACCTTAGTGGAAGATTCCCCGCGGCGGCCGAGTGTTCGAATGCAt                                                          <  5:61039/127‑1 (MQ=255)                                                                                                               gggcggggcgCCAATTGATATTGCGCATGCTCGGCCAGCTGACCATGCTCCCCGGCAATGAGCATGCGGGGAATCCTCTAGCACCTTAGTGGAAGATTCCCCGCGGCGGCCGAGTGTTCGAATGCATTAGCAGACTTAACGACGAGTgg                                    >  6:319449/1‑149 (MQ=255)                                                                                                                    gggcgCCAATTGATATTGCGCATGCTCGGCCAGCTGACCATGCTCCCCGGCAATGAGCATGCGGTGAATCCTCTAGCACCTTAGTGGAAGATTCCCCGCGGCGGCCGAGTGTTCGAATGCATTAGCAGACTTAACGACGAGTGGTCTCg                               <  5:319449/149‑1 (MQ=255)                                                                                                                        gcCAATTGATATTGCGCATGCTCGGCCAGCTGACCATGCTCCCCGGCAATGAGCATGCGGGGAATCCTCTAGCACCTTAGTGGAAGATTCCCCGCGGCGGCCGAGTGTTCGAATGCATTAGCAGACTTAACGACGAGTGGTCTCGGTc                            >  3:202311/1‑148 (MQ=255)                                                                                                                           aaTTGATATTGCGCATGCTCGGCCAGCTGACCATGCTCCCCGGCAATGAGCATGCGGGGAATCCTCTAGCACCTTAGTGGAAGATTCCCCGCGGCGGCCGAGTGTTCGAATGCATTAGCAGACTTAAcgacga                                        <  4:80704/133‑1 (MQ=255)                                                                                                                           aaTTGATATTGCGCATGCTCGGCCAGCTGACCATGCTCCCCGGCAATGAGCATGCGGGGAATCCTCTAGCACCTTAGTGGAAGATTCCCCGCGGCGGCCGAGTGTTCGAATGCATTAGCAGACTTAAcgacga                                        >  3:80704/1‑133 (MQ=255)                                                                                                                              tGATATTGCGCATGCTCGGCCAGCTGACCATGCTCCCCGGCAATGAGCATGCGGGGAATCCTCTAGCACCTTAGTGGAAGATTCCCCGCGGCGGCCGAGTGTTCGAATGCATTAGCAGACTTAACGACGAGTGGTCTCGGTCAACTAgg                     >  7:153717/1‑149 (MQ=255)                                                                                                                                        cATGCTCGGCCAGCTGACCATGCTCCCCGGCAATGAGCATGCGGGGAATCCTCTAGCACCTTAGTGGAAGATTCCCCGCGGCggccgagcatgcgcaatatcaattggcgccccgcccgacaaaggcgtacttccatacaacaggccat           <  5:33385‑M2/149‑68 (MQ=255)                                                                                                                                         aTGCTCGGCCAGCTGACCATGCTCCCCGGCAATGAGCATGCGGGGAATCCTCTAGCACCTTAGTGGAAGATTCCCCGCGGCggccgagcatgcgcaatatcaattggcgccccgcccgacaaaggcgtacttccatacaacag                >  6:248604‑M2/1‑81 (MQ=255)                                                                                                                                         aTGCTCGGCCAGCTGACCATGCTCCCCGGCAATGAGCATGCGGGGAATCCTCTAGCACCTTAGTGGAAGATTCCCCGCGGCggccgagcatgcgcaatatcaattggcgccccgcccgacaaaggcgtacttccatacaacag                <  5:248604‑M2/143‑63 (MQ=255)                                                                                                                                            cTCGGCCAGCTGACCATGCTCCCCGGCAATGAGCATGCGGGGAATCCTCTAGCACCTTAGTGGAAGATTCCCCGCGGCGGCCGAGTGTTCGAATGCATTAGCAGACTTAACGACGAGTGGTCTCGGTCAACTAGGCGTTGGCCAGGcc        <  4:11704/148‑1 (MQ=255)                                                                                                                                             tCGGCCgccgcggggaatcttccactaaggtgctagaggattccccgcatgctcattgccggggagcatggtcagctggccgagcatgcgcaatatcaattggcgccccgcccgacaaaggcgtacttccatacaacaggccatccca       >  4:56789‑M1/1‑6 (MQ=255)                                                                                                                                             tCGGCCAGCTGACCATGCTCCCCGGCAATGAGCATGCGGGGAATCCTCTAGCACCTTAGTGGAAGATTAACCGCGGCGGCCGAGTGTTCGAATGCATTAGCAGACTTAACGAAGAGTGGTGTCGGTCAACTAGGCGTTGGACAGGccc       >  4:175091/1‑148 (MQ=255)                                                                                                                                               ggCCgccgcggggaatcttccactaaggtgctagaggattccccgcatgctcattgccggggagcatggtcagctggccgagcatgcgcaatatcaattggcgccccgcccgacaaaggcgtacttccatacaacaggccatcccaca     <  6:322892‑M1/148‑145 (MQ=255)                                                                                                                                                gCCAGCTGACCATGCTCCCCGGCAATGAGCATGCGGGGAATCCTCTAGCACCTTAGTGGAAGATTCCCCGCGGCGGCCGAGTGTTCGAATGCATTAGCAGACTTAACGACGAGTGGTCTCGGTCAACTAGGCGTTGGCCAGGCCCCAGc   >  8:40058/1‑149 (MQ=255)                                                                                                                                                 ccgccgcggggaatcttccactaaggtgctagaggattccccgcatgctcattgccggggagcatggtcagctggccgagcatgcgcaatatcaattggcgccccgcccgacaaaggcgtacttccatacaacaggccatcccacagag  <  5:141956‑M1/149‑148 (MQ=255)                                                                                                                                                  |                                                                                                                                                    AAGCAGGCCTGCTCGATCAGTTGCCGCATCTCTAGCATAGAAACGCCTATCAACGACATGGTACGACCCTCTCTGTGGGATGGCCTGTTGTATGGAAGTACGCCTTTGTCGGGCGGGGCGCCAATTGATATTGCGCATGCTCGGCCAGCTGACCATGCTCCCCGGCAATGAGCATGCGGGGAATCCTCTAGCACCTTAGTGGAAGATTCCCCGCGGCGGCCGAGTGTTCGAATGCATTAGCAGACTTAACGACGAGTGGTCTCGGTCAACTAGGCGTTGGCCAGGCCCCAGCC  >  NC_002947/3854001‑3854293

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.