New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	4290087 =	57 (0.970)	4 (0.070)	4/250	NT	6.8%	coding (2500/3468 nt)	PP_3761	two‑component system sensor histidine kinase/response regulator
	?	NC_002947	4290156 =	56 (1.000)					coding (2431/3468 nt)	PP_3761	two‑component system sensor histidine kinase/response regulator

GCGTGAGCTTGGCTTCCAGGCGAGCGAACACCTCCTTGAGCTCCTCGCGGCTGGTGGGTTTGACCGCATACCCCACCGCCCCCATGTGCATGGCCGCCTCGACGCGGTCTTCCACCGAAATGATGTGCACCGGGATATGGCGGGTGCTGGCCTGCTCCTTGAGGCGCTGCAGGACAGTCAGGCCCGAGTGGTCGGGCAGGCGCATGTCCAGCAGGATCGCATCCGGAATGTACTGGGCTGCCAGCTCGAAGCCTTCGTCGGCGCCATGGGCCACCAGGCAGCTATA  >  NC_002947/4289943‑4290228                                                                                                                                                 |                                                                                                                                              gctgcattctggtaatcgaagacgagcccaactttgcccgcatcctcttcgacctggcccatgagctgggctatagctgcctggtggcccatggcgccgacgaaggcttcgagctggcagcccagtacattccggatgcgatcctgctg                                                                                                                                           <  7:347182‑M1/5‑1 (MQ=255) gctgcattctggtaatcgaagacgagcccaactttgcccgcatcctcttcgacctggcccatgagctgggctatagctgcctggtggcccatggcgccgacgaaggcttcgagctggcagcccagtacattccggatgcgatcctgctg                                                                                                                                           <  5:379113‑M1/5‑1 (MQ=255)  cGTGAGCTTGGCTTCCAGGCGAGCGAACACCTCCTTGAGCTCCTCGCGGCTGGTGGGTTTGACCGCATACCCCACCGCCCCCATGTGCATGGCCGCCTCGACGCGGTCTTCCACCGAAATGATGTGCACCGGGATATGGCGGGTGCTg                                                                                                                                           <  4:362721/148‑1 (MQ=255)   gTGAGCTTGGCTTCCAGGCGAGCGAACACCTCCTTGAGCTCCTCGCGGCTGGTGGGTTTGACCGCATACCCCACCGCCCCCATGTGCATGGCCGCCTCGACGCGGTCTTCCACCGAAATGATGTGCACCGGGATATGGCGGGTGCTGGc                                                                                                                                         <  5:141908/149‑1 (MQ=255)      aGCTTGGCTTCCAGGCGAGCGAACACCTCCTTGAGCTCCTCGCGGCTGGTGGGTTTGACCGCATACCCCACCGCCCCCATGTGCATGGCCGCCTCGACGCGGTCTTCCACCGAAATGATGTGCACCGGGATATGGCGGGTGCTGGCCt                                                                                                                                       <  6:1872/148‑1 (MQ=255)       gCTTGGCTTCCAGGCGAGCGAACACCTCCTTGAGCTCCTCGCGGCTGGTGGGTTTGACCGCATACCCCACCGCCCCCATGTGCATGGCCGCCTCGACGCGGTCTTCCACCGAAATGATGTGCACCGGGATATGGCGGGTGCTGGCCTGc                                                                                                                                     >  3:131808/1‑149 (MQ=255)            gCTTCCAGGCGAGCGAACACCTCCTTGAGCTCCTCGCGGCTGGTGGGTTTGACCGCATACCCCACCGCCCCCATGTGCATGGCCGCCTCGACGCGGTCTTCCACCGAAATGATGTGCACCGGGATATGGCGGGTGCTGGCCTGCTCCt                                                                                                                                 <  7:22004/148‑1 (MQ=255)             cTTCCAGGCGAGCGAACACCTCCTTGAGCTCCTCGCGGCTGGTGGGTTTGACCGCATACCCCACCGCCCCCATGTGCATGGCCGCCTCGACGCGGTCTTCCACCGAAATGATGTGCACCGGGATATGGCGGGTGCTGGCCTGCTCCTTg                                                                                                                               <  5:341058/149‑1 (MQ=255)                 cgaagacgagcccaactttgcccgcatcctcttcgacctggcccatgagctgggctatagctgcctggtggcccatggcgccgacgaaggcttcgagctggcagcccagtacattccggatgcgatccTGCTGGCCTGCTCCTTGAGgc                                                                                                                           <  8:59420‑M1/21‑1 (MQ=255)                       agcgaACACCTCCTTGAGCTCCTCGCGGCTGGTGGGTTTGACCGCATACCCCACCGCCCCCATGTGCATGGCCGCCTCGACGCGGTCTTCCACCGAAATGATGTGCACCGGGATATGGCGGGTGCTGGCCTGCTCCTTGAGGCGCTGCa                                                                                                                     <  1:64741/149‑1 (MQ=255)                        gcgaACACCTCCTTGAGCTCCTCGCGGCTGGTGGGTTTGACCGCATACCCCACCGCCCCCATGTGCATGGCCGCCTCGACGCGGTCTTCCACCGAAATGATGTGCACCGGGATATGGCGGGTGCTGGCCTGCTCCTTGAGGCGCTGCAg                                                                                                                    >  2:66837/1‑149 (MQ=255)                           aaCACCTCCTTGAGCTCCTCGCGGCTGGTGGGTTTGACCGCATACCCCACCGCCCCCATGTGCATGGCCGCCTCGACGCGGTCTTCCACCGAAATGATGTGCACCGGGATATGGCGGGTGCTGGCCTGCTCCTTGAGGCGCTGCAGGa                                                                                                                  >  3:130275/1‑148 (MQ=255)                           aaCACCTCCTTGAGCTCCTCGCGGCTGGTGGGTTTGACCGCATACCCCACCGCCCCCATGTGCATGGCCGCCTCGACGCGGTCTTCCACCGAAATGATGTGCACCGGGATATGGCGGGTGCTGGCCTGCTCCTTGAGGCGCTGCAGGa                                                                                                                  >  4:346002/1‑148 (MQ=255)                           aaCACCTCCTTGAGCTCCTCGCGGCTGGTGGGTTTGACCGCATACCCCACCGCCCCCATGTGCATGGCCGCCTCGACGCGGTCTTCCACCGAAATGATGTGCACCGGGATATGGCGGGTGCTGGCCTGCTCCTTGAGGCGCTGCAGGa                                                                                                                  <  4:130275/148‑1 (MQ=255)                               cctcctTGAGCTCCTCGCGGCTGGTGGGTTTGACCGCATACCCCACCGCCCCCATGTGCATGGCCGCCTCGACGCGGTCTTCCACCGAAATGATGTGCACCGGGATATGGCGGGTGCTGGCCTGCTCCTTGAGGCGCTGCAGGACAGt                                                                                                              >  8:199609/1‑148 (MQ=255)                                ctcctTGAGCTCCTCGCGGCTCGTGGCTTTGACCGCATACCCCACCGCCCCCATGTGCATCGACGCCTCGACGCGCTCTTCCACCGAAATGATGTGCACCGGGATATGGTCGGTGCTGCCCTGCTCCTAGAGGCGCTGCAGGACAGt                                                                                                              >  6:273159/1‑147 (MQ=255)                                   ctTGAGCTCCTCGCGGCTGGTGGGTTTGACCGCATACCCCACCGCCCCCATGTGCATGGCCGCCTCGACGCGGTCTTCCCCCGAAATGATGTGCACCGGGATATGGCGGGTGCTGGCCTGCTCCTTGAGGCGCTGCAGGACAGTCAGGc                                                                                                         >  7:256090/1‑149 (MQ=255)                                         ctcctcGCGGCTGGTGGGTTTGACCGCATACCCCACCGCCCCCATGTGCATGGCCGCCTCGACGCGGTCTTCCACCGAAATGATGTGCACCGGGATATGGCGGGTGCTGGCCTGCTCCTTGAGGCGCTGCAGGa                                                                                                                  >  4:333040/1‑134 (MQ=255)                                         ctcctcGCGGCTGGTGGGTTTGACCGCATACCCCACCGCCCCCATGTGCATGGCCGCCTCGACGCGGTCTTCCACCGAAATGATGTGCACCGGGATATGGCGGGTGCTGGCCTGCTCCTTGAGGCGCTGCAGGa                                                                                                                  <  3:333040/134‑1 (MQ=255)                                         ctcctcGCGGCTGGTGGGTTTGACCGCATACCCCACCGCCCCCATGTGCATGGCCGCCTCGACGCGGTCTTCCACCGAAATGATGTGCACCGGGATATGGCGGGTGCTGGCCTGCTCCTTGAGGCGCTGCAGGACAGTCAGGCCCGAGt                                                                                                   >  3:138410/1‑149 (MQ=255)                                            ctcGCGGCTGGTGGGTTTGACCGCATACCCCACCGCCCCCATGTGCATGGCCGCCTCGACGCGGTCTTCCACCGAAATGATGTGCACCGGGATATGGCGGGTGCTGGCCTGCTCCTTGAGGCGCTGCAGGACAGTCAGGCCCGAGTg                                                                                                  <  7:58798/147‑1 (MQ=255)                                                 ggCTGGTGGGTTTGACCGCATACCCCACCGCCCCCATGTGCATGGCCGCCTCGACGCGGTCTTCCACCGAAATGATGTGCACCGGGATATGGCGGGTGCTGGCCTGCTCCTTGAGGCGCTGCAGGACAGTCAGGCCCGAGTGGTCGGGc                                                                                           <  1:20206/149‑1 (MQ=255)                                                           ccatgagctgggctatagctgcctggtggcccatggcgccgacgaaggcttcgagctggcagcccagtacattccggatgcgatccTGCTGGCCTGCTCCTTGAGGCGCTGCAGGACAGTCAGGCCCGAGTGGTCGGGCAGGCGCATGt                                                                                 <  6:277172‑M1/63‑1 (MQ=255)                                                                agctgggctatagctgcctggtggcccatggcgccgacgaaggcttcgagctggcagcccagtacattccggatgcgatccTGCTGGCCTGCTCCTTGAGGCGCTGCAGGACAGTCAGGCCCGAGTGGTCGGGCAGGCGCATGTCcagc                                                                            >  7:59420‑M1/82‑149 (MQ=255)                                                                agctgggctatagctgcctggtggcccatggcgccgacgaaggcttcgagctggcagcccagtacattccggatgcgatccTGCTGGCCTGCTCCTTGAGGCGCTGCAGGACAGTCAGGCCCGAGTGGTCGGGCAGGCGCATGTCcag                                                                             >  5:277172‑M1/82‑148 (MQ=255)                                                                    aTACCCCACCGCCCCCATGTGCATGGCCGCCTCGACGCGGTCTTCCACCGAAATGATGTGCACCGGGATATGGCGGGTGCTGGCCTGCTCCTTGAGGCGCTGCAGGACAGt                                                                                                              <  2:362877/111‑1 (MQ=255)                                                                    aTACCCCACCGCCCCCATGTGCATGGCCGCCTCGACGCGGTCTTCCACCGAAATGATGTGCACCGGGATATGGCGGGTGCTGGCCTGCTCCTTGAGGCGCTGCAGGACAGt                                                                                                              >  1:362877/1‑111 (MQ=255)                                                                     tACCCCACCGCCCCCATGTGCATGGCCGCCTCGACGCGGTCTTCCACCGAAATGATGTGCACCGGGATATGGCGGGTGCTGGCCTGCTCCTTGAGGCGCTGCAGGACAGTCAGGCCCGAGTGGTCGGGCAGGCGCATGTCCAGCAGGAt                                                                       <  4:131808/149‑1 (MQ=255)                                                                      aCCCCACCTCCCCCATGTGCATGGCCGCCTCGACGCGGTCTTCCACCGAAATGATGTGCACCGGGATATGGCGGGTGCTGGCCTGCTCCTTGAGGCGCTGCAGGACAGTCAGGCCCGAGTGGTCGGGCAGGCGCATGTCCAGCAGGATc                                                                      <  6:297955/149‑1 (MQ=255)                                                                       ccccACCGCCCCCATGTGCATGGCCGCCTCGACGCGGTCTTCCACCGAAATGATGTGCACCGGGATATGGCGGGTGCTGGCCTGCTCCTTGAGGCGCTGCAGGACAGTCAGGCCCGAGTGGTCGGGCAGGCGCATGTCCAGCAGGATc                                                                      <  7:199609/148‑1 (MQ=255)                                                                        cccACCGCCCCCATGTGCATGGCCGCCTCGACGCGGTCTTCCACCGAAATGATGTGCACCGGGATATGGCGGGTGCTGGCCTGCTCCTTGAGGCGCTGCAGGACAGTCAGGCCCGAGTGGTCGGGCAGGCGCATGTCCAGCAGGATCGc                                                                    >  5:345245/1‑149 (MQ=255)                                                                         ccACCGCCCCCATGTGCATGGCCGCCTCGACGCGGTCTTCCACCGAAATGATGTGCACCGGGATATGGCGGGTGCTGGCCTGCTCCTTGAGGCGCTGCAGGACAGTCAGGCCCGAGTGGTCGGGCAGGCGCATGTCCAGCAGGATCGCa                                                                   >  4:153889/1‑149 (MQ=255)                                                                          cACCGCCCCCATGTGCATGGCCGCCTCGACGCGGTCTTCCACCGAAATGATGTGCACCGGGATATGGCGGGTGCTGGCCTGCTCCTTGAGGCGCTGCAGGACAGTCAGGCCCGAGTGGTCGGGCAGGCGCATGTCCAGCAGGATCGCAt                                                                  >  4:270834/1‑149 (MQ=255)                                                                             cGCCCCCATGTGCATGGCCGCCTCGACGCGGTCTTCCACCGAAATGATGTGCACCGGGATATGGCGGGTGCTGGCCTGCTCCTTGAGGCGCTGCAGGACAGTCAGGCCCGAGTGGTCGGGCAGGCGCATGTCCAGCAGGATCGCATCCg                                                               <  3:153889/149‑1 (MQ=255)                                                                               cccccATGTGCATGGCCGCCTCGACGCGGTCTTCCACCGAAATGATGTGCACCGGGATATGGCGGGTGCTGGCCTGCTCCTTGAGGCGCTGCAGGACAGTCAGGCCCGAGTGGTCGGGCAGGCGCATGTCCAGCAGGATCGCATCCgg                                                              >  7:30046/1‑148 (MQ=255)                                                                                  ccATGTGCATGGCCGCCTCGACGCGGTCTTCCACCGAAATGATGTGCACCGGGATATGGCGGGTGCTGGCCTGCTCCTTGAGGCGCTGCAGGACAGTCAGGCCCGAGTGGTCGGGCAGGCGCATGTCCAGCAGGATCGCATCCGGAATg                                                          >  2:121441/1‑149 (MQ=255)                                                                                    aTGTGCATGGCCGCCTCGACGCGGTCTTCCACCGAAATGATGTGCACCGGGATATGGCGGGTGCTGGCCTGCTCCTTGAGGCGCTGCAGGACAGTCAGG‑CCGAGTGGTCGGGCAGGCGCATGTCCAGCAGGATCGCATCCGGAATGTAc                                                       >  8:127456/1‑149 (MQ=255)                                                                                       tgCATGGCCGCCTCGACGCGGTCTTCCACCGAAATGATGTGCACCGGGATATGGCGGGTGCTGGCCTGCTCCTTGAGGCGCTGCAGGACAGTCAGGCCCGAGTGGTCGGGCAGGCGCATGTCCAGCAGGATCGCATCCGGAATGTACt                                                      <  3:119171/148‑1 (MQ=255)                                                                                       tgCATGGCCGCCTCGACGCGGTCTTCCACCGAAATGATGTGCACCGGGATATGGCGGGTGCTGGCCTGCTCCTTGAGGCGCTGCAGGACAGTCAGGCCCGAGTGGTCGGGCAGGCGCATGTCCAGCAGGATCGCATCCGGAATGTACTg                                                     <  2:44496/149‑1 (MQ=255)                                                                                         cATGGCCGCCTCGACGCGGTCTTCCACCGAAATGATGTGCACCGGGATATGGCGGGTGCTGGCCTGCTCCTTGAGGCGCTGCAGGACAGTCAGGCCCGAGTGGTCGGGCAGGCGCATGTCCAGCAGGATCGCATCCGGATTGTACTggg                                                   >  7:321048/1‑149 (MQ=255)                                                                                          aTGGCCGCCTCGACGCGGTCTTCCACCGAAATGATGTGCACCGGGTTATGGCGGGTGCTGGCCTGCTCCTTGAGGCGCTGCAGGACAGTCAGGCCCGAGTGGTCGGGCAGGCGCATGTCCAGCAGGATCGCATCCGGaa                                                            >  1:262194/1‑139 (MQ=255)                                                                                          aTGGCCGCCTCGACGCGGTCTTCCACCGAAATGATGTGCACCGGGATATGGCGGGTGCTGGCCTGCTCCTTGAGGCGCTGCAGGACAGTCAGGCCCGAGTGGTCGGGCAGGCGCATGTCCAGCAGGATCGCATCCGGaa                                                            <  2:262194/139‑1 (MQ=255)                                                                                             gccgccTCGACGCGGTCTTCCACCGAAATGATGTGCACCGGGATATGGCGGGTGCTGGCCTGCTCCTTGAGGCGCTGCAGGACAGTCAGGCCCGAGTGGTCGGGCAGGCGCATGTCCAGCAGGATCGCATCCGGAATGTACTGGGCTGc                                               <  1:121441/149‑1 (MQ=255)                                                                                                 ccTCGACGCGGTCTTCCACCGAAATGATGTGCACCGGGATATGGCGGGTGCTGGCCTGCTCCTTGAGGCGCTGCAGGACAGTCAGGCCCGAGTGGTCGGGCAGGCGCATGTCCAGCAGGATCGCATCCGGAATGTACTGGGCTGCCAGc                                           >  4:39168/1‑149 (MQ=255)                                                                                                   tCGACGCGGTCTTCCACCGAAATGATGTGCACCGGGATATGGCGGGTGCTGGCCTGCTCCTTGAGGCGCTGCAGGACAGTCAGGCCCGAGTGGTCGGGCAGGCGCATGTCCAGCAGGATCGCATCCGGAATGTACTGGGCTGCCAGCTc                                         >  4:300453/1‑149 (MQ=255)                                                                                                   tCGACGCGGTCTTCCACCGAAATGATGTGCACCGGGATATGGCGGGTGCTGGCCTGCTCCTTGAGGCGCTGCAGGACAGTCAGGCCCGAGTGGTCGGGCAGGCGCATGTCCAGCAGGATCGCATCCGGAATGTACTGGGCTGCCAGCTc                                         >  4:14694/1‑149 (MQ=255)                                                                                                     gACGNGGTCTTCCACCGAAATGATGTGCACCGGGATATGGCGGGTGCTGGCCTGCTCCTTGAGGCGCTGCAGGACAGTCAGGCCCGAGTGGTCGGGCAGGCGCATGTCCAGCAGGATCGCATCCGGAATGTACTGGGCTGCCAGCTCg                                        >  5:58812/1‑148 (MQ=255)                                                                                                            tCTTCCACCGAAATGATGTTCACCGGGATATGGTGGGTGCTGGCCTGCTCCTTGAGGCGCTGCAGGACAGTCAGGCCCGAGTGGTCGGGCAGGCGCATGTCCAGCAGGATCGCATCCGGAATGTACTGGGCTGCCAGCTCGAAGCCTtc                                <  5:273159/149‑1 (MQ=255)                                                                                                            tCTTCCACCGAAATGATGTGCACCGGGATATGGCGGGTGCTGGCCTGCTCCTTGAGGCGCTGCAGGACAGTCAGGCCCGAGTGGTCGGGCAGGCGCATGTCCAGCAGGATCGCATCCGGAATGTACTGGGCTGCCAGCTCGAAGCCTtc                                <  5:84504/149‑1 (MQ=255)                                                                                                              ttCCACCGAAATGATGTGCACCGGGATATGGCGGGTGCTGGCCTGCTCCTTGAGGCGCTGCAGGACAGTCAGGCCCGAGTGGTCGGGCAGGCGCATGTCCAGCAGGATCGCATCCGGAATGTACTGGGCTGCCAGCTCGAAGCCTtcgt                              >  1:2663/1‑149 (MQ=255)                                                                                                                ccACCGAAATGATGTGCACCGGGATATGGCGGGTGCTGGCCTGCTCCTTGAGGCGCTGCAGGACAGTCAGGCCCGAGTGGTCGGGCAGGCGCATGTCCAGCAGGATCGCATCCGGAATGTa                                                        >  3:257922/1‑121 (MQ=255)                                                                                                                ccACCGAAATGATGTGCACCGGGATATGGCGGGTGCTGGCCTGCTCCTTGAGGCGCTGCAGGACAGTCAGGCCCGAGTGGTCGGGCAGGCGCATGTCCAGCAGGATCGCATCCGGAATGTa                                                        <  4:257922/121‑1 (MQ=255)                                                                                                                ccACCGAAATGATGTGCACCGGGATATGGCGGGTGCTGGCCTGCTCCTTGAGGCGCTGCAGGACAGTCAGGCCCGAGTGGTCGGGCAGGCGCATGTCCAGCAGGATCGCATCCGGAATGTACTGGGCTGCCAGCTCGAAGCCTtcgtc                             <  2:2663/148‑1 (MQ=255)                                                                                                                ccACCGAAATGATGTGCACCGGGATATGGCGGGTGCTGGCCTGCTCCTTGAGGCGCTGCAGGACAGTCAGGCCCGAGTGGTCGGGCAGGCGCATGTCCAGCAGGATCGCATCCGGAATGTACTGGGCTGCCAGCTCGAAGCCTtcgt                              <  3:346002/147‑1 (MQ=255)                                                                                                                 cACCGAAATGATGTGCACCGGGATATGGCGGGTGCTGGCCTGCTCCTTGAGGCGCTGCAGGACAGTCAGG‑CCGAGTGGTCGGGCAGGCGCATGTCCAGCAGGATCGCATCCGGAATGTACTGGGCTGCCAGCTCGAAGCCTTCGTCgg                           <  7:127456/148‑1 (MQ=255)                                                                                                                         tgatgTGCACCGGGATATGGCGGGTGCTGGCCTGCTCCTTGAGGCGCTGCAGGACAGTCAGGCCCGAGTGGTCGGGCAGGCGCATGTCCAGCAGGATCGCATCCGGAATGTACTGGGCTGCCAGCTCGAAGCCTTCGTCGGCGCCATgg                   <  6:58812/149‑1 (MQ=255)                                                                                                                         tgatgTGCACCGGGATATGGCGGGTGCTGGCCTGCTCCTTGAGGCGCTGCAGGACAGTCAGGCCCGAGTGGTCGGGCAGGCGCATGTCCAGCAGGATCGCATCCGGAATGTACTGGGCTGCCAGCTCGAAGCCTTCGTCGGCGCCATgg                   <  3:14694/149‑1 (MQ=255)                                                                                                                           atgTGCACCGGGATATGGCGGGTGCTGGCCTGCTCCTTGAGGCGCTGCAGGACAGTCAGGCCCGAGTGGTCGGGCAGGCGCATGTCCAGCAGGATCGCATCCGGAATGTACTGGGCTGCCAGCTCGAAGCCTTCGTCGGCGCCATggg                  <  8:30046/148‑1 (MQ=255)                                                                                                                                cACCGGGATATGGCGGGTGCTGGCCTGCTCCTTGAGGCGCTGCAGGACAGTCAGGCCCGAGTGGTCGGGCAGGCGCATGTCCAGCAGGATCGCATCCGGAATGTACTGGGCTGCCAGCTCGAAGCCTTCGTCGGCGCCATGGGccacca            <  3:319929/149‑1 (MQ=255)                                                                                                                                   cGGGATATGGCGGGTGCTGGCCTGCTCCTTGAGGCGCTGCAGGACAGTCAGGCCCGAGTGGTCGGGCAGGCGCATGTCCAGCAGGATCGCATCCGGAATGTACTGGGCTGCCAGCTCGAAGcc                                   >  3:48008/1‑123 (MQ=255)                                                                                                                                   cGGGATATGGCGGGTGCTGGCCTGCTCCTTGAGGCGCTGCAGGACAGTCAGGCCCGAGTGGTCGGGCAGGCGCATGTCCAGCAGGATCGCATCCGGAATGTACTGGGCTGCCAGCTCGAAGcc                                   <  4:48008/123‑1 (MQ=255)                                                                                                                                   cGGGATATGGCGGGTGCTGGCCTGCTCCTTGAGGCGCTGCAGGACAGTCAGGCCCGAGTGGTCGGGCAGGCGCATGTCCAGCAGGATCGCATCCGGAATGTACTGGGCTGCCAGCTCGAAGCCTTCGTCGGCGCCATGGGCCACCAgg          >  5:228589/1‑148 (MQ=255)                                                                                                                                      gATATGGCGGGTGCTGGCCTGCTCCTTGAGGCGATGCAGGACAGTCAGGCCCGAGTGGTCGGGCAGGCGCATGTCCAGCAGGATCGCATCCGGAATGTACTGGGCTGCCAGCTCGAAGCCTTCGTCGGCGCCATGGGCCACCAGGCAGc      >  1:45707/1‑149 (MQ=255)                                                                                                                                          tGGCGGGTGCTGGCCTGCTCCTTGAGGCGCTGCAGGACAGTCAGGCCCGAGTGGTCGGGCAGGCGCATGTCCAGCAGGATCGCATCCGGAATGTACTGGGCTGCCAGCTCGAAGCCTTCGTCGGCGCCATGGGCCACCAGGCAGCtata  <  3:300453/149‑1 (MQ=255)                                                                                                                                                 |                                                                                                                                              GCGTGAGCTTGGCTTCCAGGCGAGCGAACACCTCCTTGAGCTCCTCGCGGCTGGTGGGTTTGACCGCATACCCCACCGCCCCCATGTGCATGGCCGCCTCGACGCGGTCTTCCACCGAAATGATGTGCACCGGGATATGGCGGGTGCTGGCCTGCTCCTTGAGGCGCTGCAGGACAGTCAGGCCCGAGTGGTCGGGCAGGCGCATGTCCAGCAGGATCGCATCCGGAATGTACTGGGCTGCCAGCTCGAAGCCTTCGTCGGCGCCATGGGCCACCAGGCAGCTATA  >  NC_002947/4289943‑4290228

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.