New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	4290087 =	57 (0.970)	4 (0.070)	4/250	NT	6.8%	coding (2500/3468 nt)	PP_3761	two‑component system sensor histidine kinase/response regulator
	?	NC_002947	4290156 =	56 (1.000)					coding (2431/3468 nt)	PP_3761	two‑component system sensor histidine kinase/response regulator

TACCCCACCGCCCCCATGTGCATGGCCGCCTCGACGCGGTCTTCCACCGAAATGATGTGCACCGGGATATGGCGGGTGCTGGCCTGCTCCTTGAGGCGCTGCAGGACAGTCAGGCCCGAGTGGTCGGGCAGGCGCATGTCCAGCAGGATCGCATCCGGAATGTACTGGGCTGCCAGCTCGAAGCCTTCGTCGGCGCCATGGGCCACCAGGCAGCTATAGCCCAGCTCATGGGCCAGGTCGAAGAGGATGCGGGCAAAGTTGGGCTCGTCTTCGATTACCAGAATGCAGCGGGTA  >  NC_002947/4290011‑4290304                                                                                                                                                  |                                                                                                                                                     tACCCCACCGCCCCCATGTGCATGGCCGCCTCGACGCGGTCTTCCACCGAAATGATGTGCACCGGGATATGGCGGGTGCTGGCCTGCTCCTTGAGGCGCTGCAGGACAGTCAGGCCCGAGTGGTCGGGCAGGCGCATGTCCAGCAGGAt                                                                                                                                                   <  4:131808/149‑1 (MQ=255)  aCCCCACCTCCCCCATGTGCATGGCCGCCTCGACGCGGTCTTCCACCGAAATGATGTGCACCGGGATATGGCGGGTGCTGGCCTGCTCCTTGAGGCGCTGCAGGACAGTCAGGCCCGAGTGGTCGGGCAGGCGCATGTCCAGCAGGATc                                                                                                                                                  <  6:297955/149‑1 (MQ=255)   ccccACCGCCCCCATGTGCATGGCCGCCTCGACGCGGTCTTCCACCGAAATGATGTGCACCGGGATATGGCGGGTGCTGGCCTGCTCCTTGAGGCGCTGCAGGACAGTCAGGCCCGAGTGGTCGGGCAGGCGCATGTCCAGCAGGATc                                                                                                                                                  <  7:199609/148‑1 (MQ=255)    cccACCGCCCCCATGTGCATGGCCGCCTCGACGCGGTCTTCCACCGAAATGATGTGCACCGGGATATGGCGGGTGCTGGCCTGCTCCTTGAGGCGCTGCAGGACAGTCAGGCCCGAGTGGTCGGGCAGGCGCATGTCCAGCAGGATCGc                                                                                                                                                >  5:345245/1‑149 (MQ=255)     ccACCGCCCCCATGTGCATGGCCGCCTCGACGCGGTCTTCCACCGAAATGATGTGCACCGGGATATGGCGGGTGCTGGCCTGCTCCTTGAGGCGCTGCAGGACAGTCAGGCCCGAGTGGTCGGGCAGGCGCATGTCCAGCAGGATCGCa                                                                                                                                               >  4:153889/1‑149 (MQ=255)      cACCGCCCCCATGTGCATGGCCGCCTCGACGCGGTCTTCCACCGAAATGATGTGCACCGGGATATGGCGGGTGCTGGCCTGCTCCTTGAGGCGCTGCAGGACAGTCAGGCCCGAGTGGTCGGGCAGGCGCATGTCCAGCAGGATCGCAt                                                                                                                                              >  4:270834/1‑149 (MQ=255)         cGCCCCCATGTGCATGGCCGCCTCGACGCGGTCTTCCACCGAAATGATGTGCACCGGGATATGGCGGGTGCTGGCCTGCTCCTTGAGGCGCTGCAGGACAGTCAGGCCCGAGTGGTCGGGCAGGCGCATGTCCAGCAGGATCGCATCCg                                                                                                                                           <  3:153889/149‑1 (MQ=255)           cccccATGTGCATGGCCGCCTCGACGCGGTCTTCCACCGAAATGATGTGCACCGGGATATGGCGGGTGCTGGCCTGCTCCTTGAGGCGCTGCAGGACAGTCAGGCCCGAGTGGTCGGGCAGGCGCATGTCCAGCAGGATCGCATCCgg                                                                                                                                          >  7:30046/1‑148 (MQ=255)              ccATGTGCATGGCCGCCTCGACGCGGTCTTCCACCGAAATGATGTGCACCGGGATATGGCGGGTGCTGGCCTGCTCCTTGAGGCGCTGCAGGACAGTCAGGCCCGAGTGGTCGGGCAGGCGCATGTCCAGCAGGATCGCATCCGGAATg                                                                                                                                      >  2:121441/1‑149 (MQ=255)                aTGTGCATGGCCGCCTCGACGCGGTCTTCCACCGAAATGATGTGCACCGGGATATGGCGGGTGCTGGCCTGCTCCTTGAGGCGCTGCAGGACAGTCAGG‑CCGAGTGGTCGGGCAGGCGCATGTCCAGCAGGATCGCATCCGGAATGTAc                                                                                                                                   >  8:127456/1‑149 (MQ=255)                   tgCATGGCCGCCTCGACGCGGTCTTCCACCGAAATGATGTGCACCGGGATATGGCGGGTGCTGGCCTGCTCCTTGAGGCGCTGCAGGACAGTCAGGCCCGAGTGGTCGGGCAGGCGCATGTCCAGCAGGATCGCATCCGGAATGTACt                                                                                                                                  <  3:119171/148‑1 (MQ=255)                   tgCATGGCCGCCTCGACGCGGTCTTCCACCGAAATGATGTGCACCGGGATATGGCGGGTGCTGGCCTGCTCCTTGAGGCGCTGCAGGACAGTCAGGCCCGAGTGGTCGGGCAGGCGCATGTCCAGCAGGATCGCATCCGGAATGTACTg                                                                                                                                 <  2:44496/149‑1 (MQ=255)                     cATGGCCGCCTCGACGCGGTCTTCCACCGAAATGATGTGCACCGGGATATGGCGGGTGCTGGCCTGCTCCTTGAGGCGCTGCAGGACAGTCAGGCCCGAGTGGTCGGGCAGGCGCATGTCCAGCAGGATCGCATCCGGATTGTACTggg                                                                                                                               >  7:321048/1‑149 (MQ=255)                      aTGGCCGCCTCGACGCGGTCTTCCACCGAAATGATGTGCACCGGGTTATGGCGGGTGCTGGCCTGCTCCTTGAGGCGCTGCAGGACAGTCAGGCCCGAGTGGTCGGGCAGGCGCATGTCCAGCAGGATCGCATCCGGaa                                                                                                                                        >  1:262194/1‑139 (MQ=255)                      aTGGCCGCCTCGACGCGGTCTTCCACCGAAATGATGTGCACCGGGATATGGCGGGTGCTGGCCTGCTCCTTGAGGCGCTGCAGGACAGTCAGGCCCGAGTGGTCGGGCAGGCGCATGTCCAGCAGGATCGCATCCGGaa                                                                                                                                        <  2:262194/139‑1 (MQ=255)                         gccgccTCGACGCGGTCTTCCACCGAAATGATGTGCACCGGGATATGGCGGGTGCTGGCCTGCTCCTTGAGGCGCTGCAGGACAGTCAGGCCCGAGTGGTCGGGCAGGCGCATGTCCAGCAGGATCGCATCCGGAATGTACTGGGCTGc                                                                                                                           <  1:121441/149‑1 (MQ=255)                             ccTCGACGCGGTCTTCCACCGAAATGATGTGCACCGGGATATGGCGGGTGCTGGCCTGCTCCTTGAGGCGCTGCAGGACAGTCAGGCCCGAGTGGTCGGGCAGGCGCATGTCCAGCAGGATCGCATCCGGAATGTACTGGGCTGCCAGc                                                                                                                       >  4:39168/1‑149 (MQ=255)                               tCGACGCGGTCTTCCACCGAAATGATGTGCACCGGGATATGGCGGGTGCTGGCCTGCTCCTTGAGGCGCTGCAGGACAGTCAGGCCCGAGTGGTCGGGCAGGCGCATGTCCAGCAGGATCGCATCCGGAATGTACTGGGCTGCCAGCTc                                                                                                                     >  4:300453/1‑149 (MQ=255)                               tCGACGCGGTCTTCCACCGAAATGATGTGCACCGGGATATGGCGGGTGCTGGCCTGCTCCTTGAGGCGCTGCAGGACAGTCAGGCCCGAGTGGTCGGGCAGGCGCATGTCCAGCAGGATCGCATCCGGAATGTACTGGGCTGCCAGCTc                                                                                                                     >  4:14694/1‑149 (MQ=255)                                 gACGNGGTCTTCCACCGAAATGATGTGCACCGGGATATGGCGGGTGCTGGCCTGCTCCTTGAGGCGCTGCAGGACAGTCAGGCCCGAGTGGTCGGGCAGGCGCATGTCCAGCAGGATCGCATCCGGAATGTACTGGGCTGCCAGCTCg                                                                                                                    >  5:58812/1‑148 (MQ=255)                                        tCTTCCACCGAAATGATGTTCACCGGGATATGGTGGGTGCTGGCCTGCTCCTTGAGGCGCTGCAGGACAGTCAGGCCCGAGTGGTCGGGCAGGCGCATGTCCAGCAGGATCGCATCCGGAATGTACTGGGCTGCCAGCTCGAAGCCTtc                                                                                                            <  5:273159/149‑1 (MQ=255)                                        tCTTCCACCGAAATGATGTGCACCGGGATATGGCGGGTGCTGGCCTGCTCCTTGAGGCGCTGCAGGACAGTCAGGCCCGAGTGGTCGGGCAGGCGCATGTCCAGCAGGATCGCATCCGGAATGTACTGGGCTGCCAGCTCGAAGCCTtc                                                                                                            <  5:84504/149‑1 (MQ=255)                                          ttCCACCGAAATGATGTGCACCGGGATATGGCGGGTGCTGGCCTGCTCCTTGAGGCGCTGCAGGACAGTCAGGCCCGAGTGGTCGGGCAGGCGCATGTCCAGCAGGATCGCATCCGGAATGTACTGGGCTGCCAGCTCGAAGCCTtcgt                                                                                                          >  1:2663/1‑149 (MQ=255)                                            ccACCGAAATGATGTGCACCGGGATATGGCGGGTGCTGGCCTGCTCCTTGAGGCGCTGCAGGACAGTCAGGCCCGAGTGGTCGGGCAGGCGCATGTCCAGCAGGATCGCATCCGGAATGTa                                                                                                                                    >  3:257922/1‑121 (MQ=255)                                            ccACCGAAATGATGTGCACCGGGATATGGCGGGTGCTGGCCTGCTCCTTGAGGCGCTGCAGGACAGTCAGGCCCGAGTGGTCGGGCAGGCGCATGTCCAGCAGGATCGCATCCGGAATGTa                                                                                                                                    <  4:257922/121‑1 (MQ=255)                                            ccACCGAAATGATGTGCACCGGGATATGGCGGGTGCTGGCCTGCTCCTTGAGGCGCTGCAGGACAGTCAGGCCCGAGTGGTCGGGCAGGCGCATGTCCAGCAGGATCGCATCCGGAATGTACTGGGCTGCCAGCTCGAAGCCTtcgtc                                                                                                         <  2:2663/148‑1 (MQ=255)                                            ccACCGAAATGATGTGCACCGGGATATGGCGGGTGCTGGCCTGCTCCTTGAGGCGCTGCAGGACAGTCAGGCCCGAGTGGTCGGGCAGGCGCATGTCCAGCAGGATCGCATCCGGAATGTACTGGGCTGCCAGCTCGAAGCCTtcgt                                                                                                          <  3:346002/147‑1 (MQ=255)                                             cACCGAAATGATGTGCACCGGGATATGGCGGGTGCTGGCCTGCTCCTTGAGGCGCTGCAGGACAGTCAGG‑CCGAGTGGTCGGGCAGGCGCATGTCCAGCAGGATCGCATCCGGAATGTACTGGGCTGCCAGCTCGAAGCCTTCGTCgg                                                                                                       <  7:127456/148‑1 (MQ=255)                                                     tgatgTGCACCGGGATATGGCGGGTGCTGGCCTGCTCCTTGAGGCGCTGCAGGACAGTCAGGCCCGAGTGGTCGGGCAGGCGCATGTCCAGCAGGATCGCATCCGGAATGTACTGGGCTGCCAGCTCGAAGCCTTCGTCGGCGCCATgg                                                                                               <  6:58812/149‑1 (MQ=255)                                                     tgatgTGCACCGGGATATGGCGGGTGCTGGCCTGCTCCTTGAGGCGCTGCAGGACAGTCAGGCCCGAGTGGTCGGGCAGGCGCATGTCCAGCAGGATCGCATCCGGAATGTACTGGGCTGCCAGCTCGAAGCCTTCGTCGGCGCCATgg                                                                                               <  3:14694/149‑1 (MQ=255)                                                       atgTGCACCGGGATATGGCGGGTGCTGGCCTGCTCCTTGAGGCGCTGCAGGACAGTCAGGCCCGAGTGGTCGGGCAGGCGCATGTCCAGCAGGATCGCATCCGGAATGTACTGGGCTGCCAGCTCGAAGCCTTCGTCGGCGCCATggg                                                                                              <  8:30046/148‑1 (MQ=255)                                                            cACCGGGATATGGCGGGTGCTGGCCTGCTCCTTGAGGCGCTGCAGGACAGTCAGGCCCGAGTGGTCGGGCAGGCGCATGTCCAGCAGGATCGCATCCGGAATGTACTGGGCTGCCAGCTCGAAGCCTTCGTCGGCGCCATGGGccacca                                                                                        <  3:319929/149‑1 (MQ=255)                                                               cGGGATATGGCGGGTGCTGGCCTGCTCCTTGAGGCGCTGCAGGACAGTCAGGCCCGAGTGGTCGGGCAGGCGCATGTCCAGCAGGATCGCATCCGGAATGTACTGGGCTGCCAGCTCGAAGcc                                                                                                               >  3:48008/1‑123 (MQ=255)                                                               cGGGATATGGCGGGTGCTGGCCTGCTCCTTGAGGCGCTGCAGGACAGTCAGGCCCGAGTGGTCGGGCAGGCGCATGTCCAGCAGGATCGCATCCGGAATGTACTGGGCTGCCAGCTCGAAGcc                                                                                                               <  4:48008/123‑1 (MQ=255)                                                               cGGGATATGGCGGGTGCTGGCCTGCTCCTTGAGGCGCTGCAGGACAGTCAGGCCCGAGTGGTCGGGCAGGCGCATGTCCAGCAGGATCGCATCCGGAATGTACTGGGCTGCCAGCTCGAAGCCTTCGTCGGCGCCATGGGCCACCAgg                                                                                      >  5:228589/1‑148 (MQ=255)                                                                  gATATGGCGGGTGCTGGCCTGCTCCTTGAGGCGATGCAGGACAGTCAGGCCCGAGTGGTCGGGCAGGCGCATGTCCAGCAGGATCGCATCCGGAATGTACTGGGCTGCCAGCTCGAAGCCTTCGTCGGCGCCATGGGCCACCAGGCAGc                                                                                  >  1:45707/1‑149 (MQ=255)                                                                      tGGCGGGTGCTGGCCTGCTCCTTGAGGCGCTGCAGGACAGTCAGGCCCGAGTGGTCGGGCAGGCGCATGTCCAGCAGGATCGCATCCGGAATGTACTGGGCTGCCAGCTCGAAGCCTTCGTCGGCGCCATGGGCCACCAGGCAGCtata                                                                              <  3:300453/149‑1 (MQ=255)                                                                              gctggacatgcgcctgcccgaccactcgggcctgactgtcctgcagcgcctcaaggagcaggccagcaGGATCGCATCCGGAATGTACTGGGCTGCCAGCTCGAAGCCTTCGTCGGCGCCATGGGCCACCAGGCAGCTATAGCCCAGCt                                                                      >  7:59420‑M2/69‑149 (MQ=255)                                                                              GCTGGCCTGCTCCTTGAGGCGCTGCAGGACAGTCAGGCCCGAGTGGTCGGGCAGGCGCATGTCCAGCAGGATCGCATCCGGAATGTACTGGGCTGCCAGCTCGAAGCCTTCGTCGGCGcc                                                                                                   <  8:298773‑M1/120‑1 (MQ=255)                                                                              GCTGGCCTGCTCCTTGAGGCGCTGCAGGACAGTCAGGCCCGAGTGGTCGGGCAGGCGCATGTCCAGCAGGATCGCATCCGGAATGTACTGGGCTGCCAGCTCGAAGCCTTCGTCGGCGcc                                                                                                   >  7:298773‑M1/1‑120 (MQ=255)                                                                              GCTGGCCTGCTCCTTGAGGCGCTGCAGGACAGTCAGGCCCGAGTGGTCGGGCAGGCGCATGTCCAGCAGGATCGCATCCGGAATGTACTGGGCTGCCAGCTCGAAGCCTTCGTCGGCGCCATGGGCCACCAGGCAGCTATAGCCCAGCt                                                                      <  3:83622‑M1/149‑1 (MQ=255)                                                                               ctggacatgcgcctgcccgaccactcgggcctgactgtcctgcagcgcctcaaggagcaggccagcaGGATCGCATCCGGAATGTACTGGGCTGCCAGCTCGAAGCCTTCGTCGGCGCCATGGGCCACCAGGCAGCTATAGCCCAGCt                                                                      >  5:277172‑M2/68‑148 (MQ=255)                                                                                TGGCCTGCTCCTTGAGGCGCTGCAGGACAGTCAGGCCCGAGTGGTCGGGCAGGCGCATGTCCAGCAGGATCGCATCCGGAATGTACTGGGCTGCCAGCTCGAAGCCTTCGTCGGCGCCATGGGccac                                                                                          >  4:89679‑M1/1‑127 (MQ=255)                                                                                TGGCCTGCTCCTTGAGGCGCTGCAGGACAGTCAGGCCCGAGTGGTCGGGCAGGCGCATGTCCAGCAGGATCGCATCCGGAATGTACTGGGCTGCCAGCTCGAAGCCTTCGTCGGCGCCATGGGccac                                                                                          <  3:89679‑M1/127‑1 (MQ=255)                                                                                TGGCCTGCTCCTTGAGGCGCTGCAGGACAGTCAGGCCCGAGTGGTCGGGCAGGCGCATGTCCAGCAGGATCGCATCCGGAATGTACTGGGCTGCCAGCTCGAAGCCTTCGTCGGCGCCATGGGCCACCAGGCAGc                                                                                  >  5:8872‑M1/1‑135 (MQ=255)                                                                                TGGCCTGCTCCTTGAGGCGCTGCAGGACAGTCAGGCCCGAGTGGTCGGGCAGGCGCATGTCCAGCAGGATCGCATCCGGAATGTACTGGGCTGCCAGCTCGAAGCCTTCGTCGGCGCCATGGGCCACCAGGCAGc                                                                                  <  6:8872‑M1/135‑1 (MQ=255)                                                                                TGGCCTGCTCCTTGAGGCGCTGCAGGACAGTCAGGCCCGAGTGGTCGGGCAGGCGCATGTCCAGCAGGATCGCATCCGGAATGTACTGGGCTGCCAGCTCGAAGCCTTCGTCGGCGCCATGGGCCACCAGGCAGCTATAGCCCAGCTCa                                                                    <  8:347182‑M1/149‑1 (MQ=255)                                                                                TGGCCTGCTCCTTGAGGCGCTGCAGGACAGTCAGGCCCGAGTGGTCGGGCAGGCGCATGTCCAGCAGGATCGCATCCGGAATGTACTGGGCTGCCAGCTCGAAGCCTTCGTCGGCGCCATGGGCCACCAGGCAGCTATAGCCCAGCTCa                                                                    <  7:110791‑M1/149‑1 (MQ=255)                                                                                  GCCTGCTCCTTGAGGCGCTGCAGGACAGTCAGGCCCGAGTGGTCGGGCAGGCGCATGTCCAGCAGGATCGCATCCGGAATGTACTGGGCTGCCAGCTCGAAGCCTTCGTCGGCGCCATGGGCCACCAGGCAGCTATAGCCCAGCTCATg                                                                  <  3:54180‑M1/149‑1 (MQ=255)                                                                                  GCCTGCTCCTTGAGGCGCTGCAGGACAGTCAGGCCCGAGTGGTCGGGCAGGCGCATGTCCAGCAGGATCGCATCCGGAATGTACTGGGCTGCCAGCTCGAAGCCTTCGTCGGCGCCATGGGCCACCAGGCAGCTATAGCCCAGCTCATg                                                                  <  3:208137‑M1/149‑1 (MQ=255)                                                                                   acatgcgcctgcccgaccactcgggcctgactgtcctgcagcgcctcaaggagcaggccagcaGGATCGCATCCGGAATGTACTGGGCTGCCAGCTCGAAGCCTTCGTCGGCGCCATGGGCCACCAGGCAGCTATAGCCCAGCTCATgg                                                                 <  6:277172‑M2/86‑1 (MQ=255)                                                                                    cTGCTCCTTGAGGCGCTGCAGGACAGTCAGGCCCGAGTGGTCGGGCAGGCGCATGTCCAGCAGGATCGCATCCGGAATGTACTGGGCTGCCAGCTCGAAGCCTTCGTCGGCGCCATGGGCCACCAGGCAGCTATAGCCCAGCTCATggg                                                                >  2:64534/1‑149 (MQ=255)                                                                                      gcgccTTGAGGCGCTGCAGGACAGTCAGGCCCGAGTGGTCGGGCAGGCGCATGTCCAGCAGGATCGCATCCGGAATGTACTGGGCTGCCAGCTCGAAGCCTTCGTCGGCGCCATGGGCCACCAGGCAGCTATAGCCCAGCTCATGGGcc                                                              <  4:138410/146‑1 (MQ=255)                                                                                       cTCCTTGAGGCGCTGCAGGACAGTCAGGCCCGAGTGGTCGGGCAGGCGCATGTCCAGCAGGATCGCATCCGGAATGTACTGGGCTGCCAGCTCGAAGCCTTCGTCGGCGCCATGGGCCACCAGGCAGCTATAGCCCAGCTCATGGGc                                                               >  7:49053/1‑147 (MQ=255)                                                                                       cTCCTTGAGGCGCTGCAGGACAGTCAGGCCCGAGTGGTCGGGCAGGCGCATGTCCAGCAGGATCGCATCCGGAATGTACTGGGCTGCCAGCTCGAAGCCTTCGTCGGCGCCATGGGCCACCAGGCAGCTATAGCCCAGCTCATGGGc                                                               <  1:66837/147‑1 (MQ=255)                                                                                          cTTGAGGCGCTGCAGGACAGTCAGGCCCGAGTGGTCGGGCAGGCGCATGTCCAGCAGGATCGCATCCGGAATGTACTGGGCTGCCAGCTCGAAGCCTTCGTCGGCGCCATGGGCCACCAGGCAGCTATAGcc                                                                           >  2:345597/1‑132 (MQ=255)                                                                                          cTTGAGGCGCTGCAGGACAGTCAGGCCCGAGTGGTCGGGCAGGCGCATGTCCAGCAGGATCGCATCCGGAATGTACTGGGCTGCCAGCTCGAAGCCTTCGTCGGCGCCATGGGCCACCAGGCAGCTATAGcc                                                                           <  1:345597/132‑1 (MQ=255)                                                                                           ttGAGGCGCTGCAGGACAGTCAGGCCCGAGTGGTCGGGCAGGCGCATGTCCAGCAGGATCGCATCCGGAATGTACTGGGCTGCCAGCTCGAAGCCTTCGTCGGCGCCATGGGCCACCAGGc                                                                                     <  2:62674/121‑1 (MQ=255)                                                                                           ttGAGGCGCTGCAGGACAGTCAGGCCCGAGTGGTCGGGCAGGCGCATGTCCAGCAGGATCGCATCCGGAATGTACTGGGCTGCCAGCTCGAAGCCTTCGTCGGCGCCATGGGCCACCAGGc                                                                                     >  1:62674/1‑121 (MQ=255)                                                                                             ccggatcTGCAGGACAGTCAGGCCCGAGTGGTCGGGCAGGCGCATGTCCAGCAGGATCGCATCCGGAATGTACTGGGCTGCCAGCTCGAAGCCTTCGTCGGCGCCATGGGCCACCAGGCAGCTATAGCCCAGCTCATGGGCCAGGt                                                          <  3:333540/140‑1 (MQ=255)                                                                                               ggCGCTGCAGGACAGTCAGGCCCGAGTGGTCGGGCAGGCGCATGTCCAGCAGGATCGCATCCGGAATGTACTGGGCTGCCAGCTCGAAGCCTTCGTCGGCGCCATGGGCCACCAGGCAGCTATAGCCCAGCTCATGGGCCAGGTCGAag                                                     <  4:54180/149‑1 (MQ=255)                                                                                                      cAGGACAGTCAGGCCCGAGTGGTCGGGCAGGCGCATGTCCAGCAGGATCGCATCCGGAATGTACTGGGCTGCCAGCTCGAAGCCTTCGTCGGCGCCATGGGCCACCAGGCAGCTATAGCCCAGCTCATGGGCCAGGt                                                          >  4:333540/1‑137 (MQ=255)                                                                                                      cAGGACAGTCAGGCCCGAGTGGTCGGGCAGGCGCATGTCCAGCAGGATCGCATCCGGAATGTACTGGGCTGCCAGCTCGAAGCCTTCGTCGGCGCCATGGGCCACCAGGCAGCTATAGCCCAGCTCATGGGCCAGGTCGAAGAGGAt                                                <  6:345245/147‑1 (MQ=255)                                                                                                      cAGGACAGTCAGGCCCGAGTGGTCGGGCAGGCGCATGTCCAGCAGGATCGCATCCGGAATGTACTGGGCTGCCAGCTCGAAGCCTTCGTCGGCGCCATGGGCCACCAGGCAGCTATAGCCCAGCTCATGGGCCAGGTCGAAGAGGATGc                                              >  6:8606/1‑149 (MQ=255)                                                                                                              tCAGGCCCGAGTGGTCGGGCAGGCGCATGTCCAGCAGGATCGCATCCGGAATGTACTGGGCTGCCAGCTCGAAGCCTTCGTCGGCGCCATGGGCCACCAGGCAGCTATAGCCCAGCTCATGGGCCAGGTCGAAGAGGAt                                                <  7:155655/139‑1 (MQ=255)                                                                                                              tCAGGCCCGAGTGGTCGGGCAGGCGCATGTCCAGCAGGATCGCATCCGGAATGTACTGGGCTGCCAGCTCGAAGCCTTCGTCGGCGCCATGGGCCACCAGGCAGCTATAGCCCAGCTCATGGGCCAGGTCGAAGAGGAt                                                >  8:155655/1‑139 (MQ=255)                                                                                                              tCAGGCCCGAGTGGTCGGGCAGGCGCATGTCCAGCAGGATCGCATCCGGAATGTACTGGGCTGCCAGCTCGAAGCCTTCGTCGGCGCCATGGGCCACCAGGCAGCTATAGCCCAGCTCATGGGCCAGGTCGAAGAGGATGCGGGCAAAg                                      >  6:379113/1‑149 (MQ=255)                                                                                                              tCAGGCCCGAGTGGTCGGGCAGGCGCATGTCCAGCAGGATCGCATCCGGAATGTACTGGGCTGCCAGCTCGAAGCCTTCGTCGGCGCCATGGGCCACCAGGCAGCTATAGCCCAGCTCATGGGCCAGGTCGAAGAGGATGCGGGCAAAg                                      >  8:230699/1‑149 (MQ=255)                                                                                                                 ggCCCGAGTGGTCGGGCAGGCTCATGTCCAGCAGGATCGCATCCGGAATGTACTGGGCTGCCAGCTCGAAGCCTTCGTCGGCGCCATGGGCCACCAGGCAGCTATAGCCCAGCTCATGGGCCAGGTCGAAGAGGATGCGGGCAAAGTTg                                   <  3:39168/149‑1 (MQ=255)                                                                                                                     cGAGTGGTCGGGCAGGCGCATGTCCAGCAGGATCGCATCCGGAATGTACTGGGCTGCCAGCTCGAAGCCTTCGTCGGCGCCATGGGCCACCAGGCAGCTATAGCCCAGCTCATGGGCCAGGTCGAAGAGGATGCGGGCAAAGTTGGGCt                               >  6:128257/1‑149 (MQ=255)                                                                                                                     cGAGTGGTCGGGCAGGCGCATGTCCAGCAGGATCGCATCCGGAATGTACTGGGCTGCCAGCTCGAAGCCTTCGTCGGCGCCATGGGCCACCAGGCAGCTATAGCCCAGCTCATGGGCCAGGTCGAAGAGGATGCGGGCAAAGTTGGGCt                               >  7:84204/1‑149 (MQ=255)                                                                                                                          ggTCGGGCAGGCGCATGTCCAGCAGGATCGCATCCGGAATGTACTGGGCTGCCAGCTCGAAGCCTTCGTCGGCGCCATGGGCCACCAGGCAGCTATAGCCCAGCTCATGGGCCAGGTCGAAGAGGATGCGGGCAAAGTTGGGCTCGTCt                          <  4:208137/149‑1 (MQ=255)                                                                                                                            tCGGGCAGGCGCATGTCCAGCAGGATCGCATCCGGAATGTACTGGGCTGCCAGCTCGAAGCCTTCGTCGGCGCCATGGGCCACCAGGCAGCTATAGCCCAGCTCATGGGCCAGGTCGAAGAGGATGCGGGCAAAGTTGGGCTCGTCTTc                        >  5:230219/1‑149 (MQ=255)                                                                                                                             gcctcaaggagcaggccagcaGGATCGCATCCGGAATGTACTGGGCTGCCAGCTCGAAGCCTTCGTCGGCGCCATGGGCCACCAGGCAGCTATAGCCCAGCTCATGGGCCAGGTCGAAGAGGATGCGGGCAAAGTTGGGCTCGTCTTCg                       <  8:59420‑M2/128‑1 (MQ=255)                                                                                                                                           tCCAGCAGGATCGCATCCGGAATGTACTGGGCTGCCAGCTCGAAGCCTTCGTCGGCGCCATGGGCCACCAGGCAGCTATAGCCCAGCTCATGGGCCAGGTCGAAGAGGATGCGGGCAAAGTTGGGCTCGTCTTCGATTACCa                >  6:43656/1‑142 (MQ=255)                                                                                                                                           tCCAGCAGGATCGCATCCGGAATGTACTGGGCTGCCAGCTCGAAGCCTTCGTCGGCGCCATGGGCCACCAGGCAGCTATAGCCCAGCTCATGGGCCAGGTCGAAGAGGATGCGGGCAAAGTTGGGCTCGTCTTCGATTACCa                <  5:43656/142‑1 (MQ=255)                                                                                                                                           tCCAGCAGGATCGCATCCGGAATGTACTGGGCTGCCAGCTCGAAGCCTTCGGCGGCGCCATGGGCCACCAGGCAGCTATAGCCCAGCTCATGGGCCAGGTCGAAGAGGATGCGGGCAAAGTTGGGCTCGTCTTCGATTACCAGAATGCa         <  3:270834/149‑1 (MQ=255)                                                                                                                                             cagcaGGATCGCATCCGGAATGTACTGGGCTGCCAGCTCGAAGCCTTCGTCGGCGCCATGGGCCACCAGGCAGCTATAGCCCAGCTCATGGGCCAGGTCGAAGAGGATGCGGGCAAAGTTGGGCTCGTCTTCGATTACCAGAATGCAGc       <  5:379113‑M2/144‑1 (MQ=255)                                                                                                                                             cagcaGGATCGCATCCGGAATGTACTGGGCTGCCAGCTCGAAGCCTTCGTCGGCGCCATGGGCCACCAGGCAGCTATAGCCCAGCTCATGGGCCAGGTCGAAGAGGATGCGGGCAAAGTTGGGCTCGTCTTCGATTACCAGAATGCAGc       <  7:347182‑M2/144‑1 (MQ=255)                                                                                                                                                  ggATCGCATCCGGAATGTACTGGGCTGCCAGCTCGAAGCCTTCGTCGGCGCCATGGGCCACCAGGCAGCTATAGCCCAGCTCATGGGCCAGGTCGAAGAGGATGCGGGCAAAGTTGGGCTCGTCTTCGATTACCAGAATGCAGCGGGTa  <  8:84204/149‑1 (MQ=255)                                                                                                                                                  |                                                                                                                                                     TACCCCACCGCCCCCATGTGCATGGCCGCCTCGACGCGGTCTTCCACCGAAATGATGTGCACCGGGATATGGCGGGTGCTGGCCTGCTCCTTGAGGCGCTGCAGGACAGTCAGGCCCGAGTGGTCGGGCAGGCGCATGTCCAGCAGGATCGCATCCGGAATGTACTGGGCTGCCAGCTCGAAGCCTTCGTCGGCGCCATGGGCCACCAGGCAGCTATAGCCCAGCTCATGGGCCAGGTCGAAGAGGATGCGGGCAAAGTTGGGCTCGTCTTCGATTACCAGAATGCAGCGGGTA  >  NC_002947/4290011‑4290304

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.