New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 4986305	53 (0.900)	3 (0.050)	3/250	NT	5.1%	coding (547/753 nt)	flgA	flagella basal body P‑ring formation protein
	?	NC_002947	= 4986339	61 (1.090)					coding (581/753 nt)	flgA	flagella basal body P‑ring formation protein

AAGCGCGACAACACGGTCGGCGAAGGTGACGTGGCCCTGCGCGAGCGCGATGTCGGCACCCTGGGCCAGGGCTTTCTGACCGAGCTGGACCAGGCGGTGGGCATGAAGATGCTGCGCCCCACGGTGATCGACCAGGTGCTCACCCCGCAACATCTGGAACAGGCCGAGGTGGTGCGCAAGGGTGACCAGGTGGTGATCATTGCCCGCAGTGGCAGCCTGAGTGTGCGCATGCCGGGCGAAGCCTTGAGCAAGGGCGGCCTGAGCGAGCAGATTCGGGTACGCAACCTCAATTC  >  NC_002947/4986161‑4986453                                                                                                                                                 |                                                                                                                                                     aaGCGCGACAACACGGTCGGCGAAGGTGACGTGGCCCTGCGCGAGCGCGATGTCGGCACCCTGGGCCAGGGCTTTCTGACCGAGCTGGACCAGGCGGTGGGCATGAAGATGCTGCGCCCCACGGTGATCGACCAGGTGCCCACCCCg                                                                                                                                                    <  4:82739/147‑1 (MQ=255)   gcgcGACAACACGGTCGGCGAAGGTGACGTGGCCCTGCGCGAGCGCGATGTCGGCACCCTGGGCCAGGGCTTTCTGACCGAGCTGGACCAGGCGGTGGGCATGAAGATGCTGCGCCCCACGGTGATCGACCAGGTGCTCACCCCGCaa                                                                                                                                                 >  1:22152/1‑148 (MQ=255)       gACAACACGGTCGGCGAAGGTGACGTGGCCCTGCGCGAGCGCGATGTCGGCACCCTGGGCCAGGGCTTTCTGACCGAGCTGGACCAGGCGGTGGGCATGAAGATGCTGCGCCCCACGGTGATCGACCAGGTGCTCACCCCGCAACATCt                                                                                                                                            <  1:298120/149‑1 (MQ=255)           acacGGTCGGCGAAGGTGACGTGGCCCTGCGCGAGCGCGATGTCGGCACCCTGGGCCAGGGCTTTCTGACCGAGCTGGACCAGGCGGTGGGCATGAAGATGCTGCGCCCCACGGTGATCGACCAGGTGCTCACCCCGCAACATCTGGaa                                                                                                                                        >  1:176252/1‑149 (MQ=255)               ggTCGGCGAAGGTGACGTGGCCCTGCGCGAGCGCGATGTCGGCACCCTGGGCCAGGGCTTTCTGACCGAGCTGGCCCAGGCGGTGGGCATGAAGATGCTGCGCCCCACGGTGATCGACCAGGTGCTCACCCCGCAACATCTGGAACAgg                                                                                                                                    >  2:12820/1‑149 (MQ=255)                 tCGGCGAAGGTGACGTGGCCCTGCGCGAGCGCGATGTCGGCACCCTGGGCCAGGGCTTTCTGACCGAGCTGGACCAGGCGGTGGGCATGAAGATGCTGCGCCCCACGGTGATCGACCAGGTGCTCACCCCGCAACATCTGGAACAGGcc                                                                                                                                  >  1:234385/1‑149 (MQ=255)                 tCGGCGAAGGTGACGTGGCCCTGCGCGAGCGCGATGTCGGCACCCTGGGCCAGGGCTTTCTGACCGAGCTGGACCAGGCGGTGGGCATGAAGATGCTGCGCCCCACGGTGATCGACCAGGTGCTCACCCCGCAACATCTGGAACAGGcc                                                                                                                                  <  4:73077/149‑1 (MQ=255)                    gCGAAGGTGACGTGGCCCTGCGCGAGCGCGATGTCGGCACCCTGGGCCAGGGCTTTCTGACCGAGCTGGACCAGGCGGTGGGCATGAAGATGCTGCGCCCCACGGTGATCGACCAGGTGCTCACCCCGCAACATCTGGAACAGGCCGAg                                                                                                                               <  2:176252/149‑1 (MQ=255)                                   ccccGCGCGAGCGCGATGTCGGCACCCTGGGCCAGGGCTTTCTGACCGAGCTGGACCAGGCGGTGGGCATGAAGATGCTGCGCCCCACGGTGATCGACCAGGTGCTCACCCttgcgcaccacctcggcctgttccagatgttgcggggt                                                                                                                <  1:158485‑M1/149‑39 (MQ=255)                                    ccTGCGCGAGCGCGATGTCGGCACCCTGGGCCAGGGCTTTCTGACCGAGCTGGACCAGGCGGTGGGCATGAAGATGCTGCGCCCCACGGTGATCGACCAGGTGCTCACCCttgcgcaccacctcggcctgttccagatgttgcggggtg                                                                                                               >  8:186356‑M1/1‑110 (MQ=255)                                        cgcgagcgcgaTGTCGGCACCCTGGGCCAGGGCTTTCTGACCGAGCTGGACCAGGCGGTGGGCATGGAGATGCTGCGCCCCACGGTGATCGACCAGGTGCTCACCCCGCAACATCTGGAACAGGCCGAGGTGGTGCGCAAGGGTGAcc                                                                                                            <  2:15738/148‑1 (MQ=255)                                        cgcgagcgcgaTGTCGGCACCCTGGGCCAGGGCTTTCTGACCGAGCTGGACCAGGCGGTGGGCATGAAGATGCTGCGCCCCACGGTGATCGACCAGGTGCTCACCCttgcgcaccacctcggcctgttccagatgttgcggggtgagc                                                                                                            <  7:186356‑M1/148‑43 (MQ=255)                                             gcgcgaTGTCGGCACCCTGGGCCAGGGCTTTCTGACCGAGCTGGACCAGGCGGTGGGCATGAAGATGCTGCGCCCCACGGTGATCGACCAGGTGCTCACCCCGCAACATCTGGAACAGGCCGAGGTGGTGCGCAAGGGTGACCAggtgg                                                                                                      <  6:46562/149‑1 (MQ=255)                                               gcgaTGTCGGCACCCTGGGCCAGGGCTTTCTGACCGAGCTGGACCAGGCGGTGGGCATGAAGATGCTGCGCCCCACGGTGATCGAGCAGGTGCTCACCCCGCAACATCTGGAACAGGCCGAGGTGGTGCGCAAGGGTGACCAggtggt                                                                                                     >  5:880/1‑148 (MQ=255)                                               gcgaTGTCGGCACCCTGGGCCAGGGCTTTCTGACCGAGCTGGACCAGGCGGTGGGCATGAAGATGCTGCGCCCCACGGTGATCGACCAGGTGCTCACCCCGCAACATCTGGAACAGGCCGAGGTGGTGCGCAAGGGTGACCAggtggt                                                                                                     >  5:83680/1‑148 (MQ=255)                                                 gaTGTCGGCACCCTGGGCCAGGGCTTTCTGACCGAGCTGGACCAGGCGGTGGGCATGAAGATGCTGCGCCCCACGGTGATCGACCAGGTGCTCACCCCGCAACATCTGGAACAGGCCGAGGTGGTGCGCAAGGGTGACCAGGTGGTGAt                                                                                                  >  1:93561/1‑149 (MQ=255)                                                 gaTGTCGGCACCCTGGGCCAGGGCTTTCTGACCGAGCTGGACCAGGCGGTGGGCATGAAGATGCTGCGCCCCACGGTGATCGACCAGGTGCTCACCCCGCAACATCTGGAACAGGCCGAGGTGGTGCGCAAGGGTGACCAGGTGGTGAt                                                                                                  >  1:191958/1‑149 (MQ=255)                                                   tGTCGGCACCCTGGGCCAGGGCTTTCTGACCGAGCTGGACCAGGCGGTGGGCATGAAGATGCTGCGCCCCACGGTGATCGACCAGGTGCTCACCCCGCAACATCTGGAACAGGCCGAGGTGGTGCGCAAGGGTGACCAGGTGGTGATCa                                                                                                >  1:138979/1‑149 (MQ=255)                                                    ctCGGCACCCTCGGCCACCGCTTTCTGACCGACCTGGACCAGGCGGTGGGAATGAAGATGCTGCGCCCCACGGTGATCGACCAGGAGCTCACCCACCACCATCAGGAATAGGCCGACGTCGTCCGCAAGGGTGACCAGGTGGTGAtaaa                                                                                               >  6:312036/2‑146 (MQ=255)                                                        gCACCCTGGGCCAGGGCTTTCTGACCGAGCTGGACCAGGCGGTGGGCATGAAGATGCTGCGCCCCACGGTGATCGACCAGGTGCTCACCCCGCAACATCTGGAACAGGCCGAGGTGGTGCGCAAGGGTGACCAGGTGGTGATCATTGcc                                                                                           >  5:95069/1‑149 (MQ=255)                                                          aCCCTGGGCCAGGGCTTTCTGACCGAGCTGGACCAGGCGGTGGGCATGAAGATGCTGCGCCCCACGGTGATCGACCAGGTGCTCACCCCGCAACATCTGGAACAGGCCGAGGTGGTGCGCAAGGGTGACCAGGTGGTGATCATTGCCCg                                                                                         >  2:138766/1‑149 (MQ=255)                                                            ccTGGGCCAGGGCTTTCTGACCGAGCTGGACCAGGCGGTGGGCATGAAGATGCTGCGCCCCACGGTGATCGACCAGGTGCTCACCCCGCAACATCTGGAACAGGCCGAGGTGGTGCGCAAGGGTGACCAGGTGGTGATCATTGCCCGCa                                                                                       <  3:246793/149‑1 (MQ=255)                                                              tGGGCCAGGGCTTTCTGACCGAGCTGGACCAGGCGGTGGGCATGAAGATGCTGCGCCCCACGGTGATCGACCAGGTGCTCACCCCGCAACATCTGGAACAGGCCGAGGTGGTGCGCAAgggtga                                                                                                              >  6:15276‑M2/1‑118 (MQ=255)                                                                  ccAGGGCTTTCTGACCGAGCTGGACCAGGCGGTGGGCATGAAGATGCTGCGCCCCACGGTGATCGACCAGGTGCTCACCCCGCAACATCTGGAACAGGCCGAGGTGGTGCGCAAGGGTGACCAGGTGGTGATCATTTCCCGCATTggaa                                                                                 >  3:201788/1‑147 (MQ=255)                                                                   cAGGGCTTTCTGACCGAGCTGGACCAGGCGGTGGGCATGAAGATGCTGCGCCCCACGGTGATCGACCAGGTGCTCACCCCGCAACATCTGGAACAGGCCGAGGTGGTGCGCAAGGGTGACCAGGTGGTGATCATTGCCCGCAGTGGCAg                                                                                >  4:327484/1‑149 (MQ=255)                                                                        cTTTCTGACCGAGCTGGACCAGGCTGTGGGCATGAAGATGCTGCGCCCCACGGTGATCTACCAGGTGCTCACCCCGCAACATCTGGAACAGGCCGAGGTGGTGCGCAAGGGTTACCAGGTGGTGATCATTGCCCGCAGTTGCAGCCTGa                                                                           <  8:112111/149‑1 (MQ=255)                                                                        cTTTCTGACCGAGCTGGACCAGGCGGTGGGCATGAAGATGCTGCGCCCCACGGTGATCGACCAGGTGCTCACCCCGCAACATCTGGAACAGGCCGAGGTGGTGCGCAAGGGTGACCAGGTGGTGATCATTGCCCGCAGTGGCAGCCt                                                                             >  5:377291/1‑147 (MQ=255)                                                                           tCTGACCGAGCTGGACCAGGCGGTGGGCATGAAGATGCTGCGCCCCACGGTGATCGACCAGGTGCTGACCCCGCAACATCTGGAACAGGCCGAGGTGGTGCTCAAGGGAGACCAGGTTGTGATCATTGCGCGCAGTGGCAGCCTGAgt                                                                         <  8:93533/148‑1 (MQ=255)                                                                           tCTGACCGAGCTGGACCAGGCGGTGGGCATGAAGATGCTGCGCCCCACGGTGATCGACCAGGTGCTCACCCCGCAACATCTGGAACAGGCCGAGGTGGTGCGCAAGGGTGACCAGGTGGTGATCATTGCCCGCAGTGGCAGCCTGAgt                                                                         <  7:212910/148‑1 (MQ=255)                                                                                ccGAGCTGGACCAGGCGGTGGGCATGAAGATGCTGCGCCCCACGGTGATCGACCAGGTGCTCACCCCGCAACATCTGGAACAGGCCGAGGTGGTGCGCAAGGGTGACCAGGTGGTGATCATTGCCCGCAGTg                                                                                    >  8:330896/1‑132 (MQ=255)                                                                                ccGAGCTGGACCAGGCGGTGGGCATGAAGATGCTGCGCCCCACGGTGATCGACCAGGTGCTCACCCCGCAACATCTGGAACAGGCCGAGGTGGTGCGCAAGGGTGACCAGGTGGTGATCATTGCCCGCAGTg                                                                                    <  7:330896/132‑1 (MQ=255)                                                                                        gACCAGGCGGTGGGCATGAAGATGCTGCGCCCCACGGTGATCGACCAGGTGCTCACCCCGCAACATCTGGAACAGGCCGAGGTGGTGCGCAAGGGTGACCAGGTGGTGATCATTGCCCGCAGTGGCAGCCTGAGTGTGCGCATGCCgg                                                            <  1:273761/148‑1 (MQ=255)                                                                                        gACCAGGCGGTGGGCATGAAGATGCTGCGCCCCACGGTGATCGACCAGGTGCTCACCCCGCAACATCTGGAACAGGCCGAGGTGGTGCGCAAGGGTGACCAGGTGGTGATCATTGCCCGCAGTGGCAGCCTGAGTGTGCCCATGCCgg                                                            <  2:234385/148‑1 (MQ=255)                                                                                        gACCAGGCGGTGGGCATGAAGATGCTGCGCCCCACGGTGATCGACCAGGTGCTCACCCCGCAACATCTGGAACAGGCCGAGGAGGTGCGCAAGGGTGACCAGGTGGTGATCATTGCCCGCAGTGGCAGCCTGAGTGTGCGCATGCCgg                                                            >  2:273761/1‑148 (MQ=255)                                                                                            aGGCGGTGGGCATGAAGATGCTGCGCCCCACGGTGATCGACCAGGTGCTCACCCCGCAACATCTGGAACAGGCCGAGGTGGTGCGCAAGGGTGACCAGGTGGTGATCATTGCCCGCAGTGGCAGCCTGAGTGTGCGCATGCCGGGCGaa                                                       <  2:191958/149‑1 (MQ=255)                                                                                                 gTGGGCATGAAGATGCTGCGCCCCACGGTGATCGACCAGGTGCTCACCCCGCAACATCTGGAACAGGCCGAGGTGGTGCGCAAGGGTGACCAGGTGGTGATCATTGCCCGCAGTGGCAGCCTGAGTGTGCGCATGCCGGGCGAAGCCtt                                                  >  3:109812/1‑149 (MQ=255)                                                                                                  tGGGCATGAAGATGCTGCGCCCCACGGTGATCGACCAGGTGCTCACCCCGCAACATCTGGAACAGGCCGAGGTGGTGCGCAAGGGTGACCAGGTGGTGATCATTGCCCGCAGTGGCAGCCTGAGTGTGCGCATGCCGGGCGAAGCCTTg                                                 <  6:95069/149‑1 (MQ=255)                                                                                                    ggCATGAAGATGCTGCGCCCCACGGTGATCGACCAGGTGCTCACCCCGCAACATCTGGAACAGGCCGAGGTGGTGCGCAAGGGTGACCAGGTGGTGATCCTTGCCCGCAGTGGCAGCCTGAGTGTGCGCATGCCGGGCGAAGCCTTGa                                                <  6:880/148‑1 (MQ=255)                                                                                                      cATGAAGATGCTGCGCCCCACGGTGATCGACCAGGTGCTCACCCCGCAACATCTGGAACAGGCCGAGGTGGTGCGCAAGGGTGACCAGGTGGTGATCATTGCCCGCAGTGGCAGCCTGAGTGTGCGCATGCCGGGCGAAGCCTTGAGc                                              >  3:174575/1‑148 (MQ=255)                                                                                                       aTGAAGATGCTGCGCCCCACGGTGATCGACCAGGTGCTCACCCCGCAACATCTGGAACAGGCCGAGGTGGTGCGCAAGGGTGACCAGGTGGTGATCATTGCCCGCAGTGGCAGCCTGAGTGTGCGCATGCCGGGCGAAGCCTTGAGc                                              >  7:216594/1‑147 (MQ=255)                                                                                                       aTGAAGATGCTGCGCCCCACGGTGATCGACCAGGTGCTCACCCCGCAACATCTGGAACAGGCCGAGGTGGTGCGCAAGGGTGACCAGGTGGTGATCATTGCCCGCAGTGGCAGCCTGAGTGTGCGCATGCCGGGCGAAGCCTTGAGCaa                                            <  1:12820/149‑1 (MQ=255)                                                                                                         gAAGATGCTGCGCCCCACGGTGATCGACCAGGTGCTCACCCCGCAACATCTGGAACAGGCCGAGGTGGTGCGCAAGGGTGACCAGGTGGTGATCATTGCCCGCAGTGGCAGCCTGAGTGTGCGCATGCCGGGCGAAGCCTTGAGCAAgg                                          >  8:312448/1‑149 (MQ=255)                                                                                                         gAAGATGCTGCGCCCCACGGTGATCGACCAGGTGCTCACCCCGCAACATCTGGAACAGGCCGAGGTGGTGCGCAAGGGTGACCAGGTGGTGATCATTGCCCGCAGTGGCAGCCTGAGTGTGCGCATGCCGGGCGAAGCCTTGAGCAAgg                                          >  7:266901/1‑149 (MQ=255)                                                                                                                 tgcGCCCCACGGTGATCGACCAGGTGCTCACCCCGCAACATCTGGAACAGGCCGAGGTGGTGCGCAAGGGTGACCAGGTGGTGGTCATTGCCCGCAGTGGCAGCCTGAGTGTGCGCATGCCGGGCGAAGCCTTGAGCAAGGGCGGCCt                                   >  3:352546/1‑148 (MQ=255)                                                                                                                 tgcGCCCCACGGTGATCGACCAGGTGCTCACCCCGCAACATCTGGAACAGGCCGAGGTGGTGCGCAAGGGTGACCAGGTGGTGATCATTGCCCGCAGTGGCAGCCTGAGTGTGCGCATGCCGGGCGAAGCCTTGAGCAAGGGCGGCCt                                   >  4:347896/1‑148 (MQ=255)                                                                                                                   cgcCCCACGGTGATCGACCAGGTGCTCACCCCGCAACATCTGGAACAGGCCGAGGTGGTGCGCAAGGGTGACCAGGTGGTGATCATTGCCCGCAGTGGCAGCCTGAGTGTGCGCATGCCGGGCGAAGCCTTGAGCAAGGGCGGCCTga                                 <  2:22152/148‑1 (MQ=255)                                                                                                                   cgacccACGGTGATCGACGAGGTGCTGACCCCGCTTCATCTGGAATAGGCCGAGGTGGTGAGCAAGGGTGTCCAGGTGGTTATGTTTGCGCGGAGTGGCAGGCTTTGTGTGCGCATGCCGGGCGAAGCCTTGTGCAAGGGCGGCATgag                                <  5:312036/146‑1 (MQ=255)                                                                                                                      cccACGGTGATCGACCAGGTGCTCACCCCGCAACATCTGGAACAGGCCGAGGTGGTGCGCAAGGGTGACCAGGTGGTGATCATTGCCCGCAGTGGCAGCCTGAGTGTGCGCATGCCGGGCGAAGCCTTGAGCAAGGGCGGCCTgagcga                             <  8:266901/149‑1 (MQ=255)                                                                                                                      cccACGGTGATCGACCAGGTGCTCACCCCGCAACATCTGGAACAGGCCGAGGTGGTGCGCAAGGGTGACCAGGTGGTGATCATTGCCCGCAGTGGCAGCCTGAGTGTGCGCATGCCGGGCGAAGCCTTGAGCAAGGGCGGCCTgagc                               >  3:114678/1‑147 (MQ=255)                                                                                                                        cACGGTGATCGACCAGGTGCTCACCCCGCAACATCTGGAACAGGCCGAGGTGGTGCGCAAGGGTGACCAGGTGGTGATCATTGCCCGCAGTGGCAGCCTGAGTGTGCGCATGCCGGGCGAAGCCTTGa                                                >  8:215984/1‑128 (MQ=255)                                                                                                                        cACGGTGATCGACCAGGTGCTCACCCCGCAACATCTGGAACAGGCCGAGGTGGTGCGCAAGGGTGACCAGGTGGTGATCATTGCCCGCAGTGGCAGCCTGAGTGTGCGCATGCCGGGCGAAGCCTTGa                                                <  7:215984/128‑1 (MQ=255)                                                                                                                        cACGGTGATCGACCAGGTGCTCACCCCGCAACATCTGGAACAGGCCGAGGTGGTGCGCAAGGGTGACCAGGTGGTGATCATTGCCCGCAGTGGCAGCCTGAGTGTGCGCATGCCGGGCGAAGCCCTGAGCAAGGGCGGCCTgagcgag                            >  8:22210/1‑148 (MQ=255)                                                                                                                               aTCGACCAGGTGCTCACCCCGCAACATCTGGAACAGGCCGAGGTGGTGCGCAAGGGTGACCAGGTGGTGATCATTGCCCGCAGTGGCAGCCTGAGTGTGCGCATGCCGGGCGAAGCCTTGAGCAAGGGCGGCCTGAGCGAGCAGATTCg                    >  4:185105/1‑149 (MQ=255)                                                                                                                                 cGACCAGGTGCTCACCCCGCAACATCTGGAACAGGCCGAGCTGGTGCGCAAGGGTGACCAGGTGGTGATCATTGCCCGCAGTGGCAGCCTGAGAGTGCGCATGCCGGGCGAAGCCTTGAGCAAGGGCGGCCTGAGCGAGCAGATTCgg                   >  3:155325/1‑148 (MQ=255)                                                                                                                                    ccAGGTGCTCACCCCGCAACATCTGGAACAGGCCGAGGTGGTGCGCAAGGGTGACCAGGTGGTGATCATTGCCCGCAGTGGCAGCCTGAGTGTGCGCATGCCGGGCGAAGCCCTGAGCAAGGGCGGCCTGAGCGAGCAGATTCGGGTAc               <  7:22210/149‑1 (MQ=255)                                                                                                                                        gTGCTCACCCCGCAACATCTGGAACAGGCCGAGGTGGTGCGCAAGGGTGACCAGGTGGTGATCATTGCCCGCAGTGGCAGCCTGAGTGTGCGCATGCCGGGCGAAGCCTTGAGCAAGGGCGGCCTGAGCGAGCAGATTCGGGTACGCaa           >  1:289456/1‑149 (MQ=255)                                                                                                                                        gTGCTCACCCCGCAACATCTGGAACAGGCCGAGGTGGTGCGCAAGGGTGACCAGGTGGTGATCATTGCCCGCAGTGGCAGCCTGAGTGTGCGCATGCCGGGCGAAGCCTTGAGCAAGGGCGGCCTGAGCGAGCAGATTCGGGTACGCaa           >  3:353827/1‑149 (MQ=255)                                                                                                                                         tGCTCACCCCGCAACATCTGGAACAGGCCGAGGTGGTGCGCAAGGGTGACCAGGTGGTGATCATTGCCCGCAGTGGCAGCCTGAGTGTGCGCATGCCGGGCGAAGCCTTGAGCAAGGGCGGCCTGAGCGAGCAGATTCGGGTACGCAAc          <  3:327484/149‑1 (MQ=255)                                                                                                                                          gCTCACCCCGCAACATCTGGAACAGGCCGAGGTGGTGCGCAAgggtgagcacctggtcgatcaccgtggggcgcagcatcttcatgcccaccgcctggtccagctcggtcagaaagccctggcccagggtgccgacatcgcgctcgcg          <  7:186356‑M2/148‑107 (MQ=255)                                                                                                                                            tCACCCttgcgcaccacctcggcctgttccagatgttgcggggtgagcacctggtcgatcaccgtggggcgcagcatcttcatgcccaccgcctggtccagctcggtcagaaagccctggccca                                >  6:15276‑M1/1‑6 (MQ=255)                                                                                                                                            tCACCCCGCAACATCTGGAACAGGCCGAGGTGGTGCGCAAGGGTGACCAGGTGGTGATCATTGCCCGCAGTGGCAGCCTGAGTGTGCGCATGCCGGGCGAAGCCTTGAGCAAGGGCGGCCTGAGCGAGCAGATTCGGGTACGCAACCt        >  8:117783/1‑148 (MQ=255)                                                                                                                                             cACCCCGCAACATCTGGAACAGGCCGAGGTGGTGCGCAAgggtgagcacctggtcgatcaccgtggggcgcagcatcttcatgcccaccgcctggtccagctcggtcagaaagccctggcccagggtgccgacatcgcgctcgcgcagg      >  8:186356‑M2/1‑39 (MQ=255)                                                                                                                                              aCCCCGCAACATCTGGAACAGGCCGAGGTGGTGCGCAAgggtgagcacctggtcgatcaccgtggggcgcagcatcttcatgcccaccgcctggtccagctcggtcagaaagccctggcccagggtgccgacatcgcgctcgcgcgggg     <  1:158485‑M2/149‑112 (MQ=255)                                                                                                                                              aCCCCGCAACATCTGGAACAGGCCGAGGTGGTGCGCAAGGGTGACCAGGTGGTGATCATTGCCCGCAGTGGCAGCCTGAGTGTGCGCATGCCGGGCGAAGCCTTGAGCAAGGGCGGCCTGAGCGAGCAGATTCGGGTACGCAACCTCaa     <  4:109812/149‑1 (MQ=255)                                                                                                                                              aCCCCGCAACATCTGGAACAGGCCGAGGTGGTGCGCAAGGGTGACCAGGTGGTGATCATTGCCCGCAGTGGCAGCCTGAGTGTGCGCATGCCGGGCGAAGCCTTGAGCAAGGGCGGCCTGAGCGAGCAGATTCGGGTACGCAACCTCaa     >  1:294332/1‑149 (MQ=255)                                                                                                                                                 ccGCAACATCTGGAACAGGCCGAGGTGGTGCGCAAGGGTGACCAGGTGGTGGTCATTGCCCGCAGTGGCAGCCTGAGTGTGCGCATGCCGGGCGAAGCCTTGAGCAAGGGCGGCCTGAGCGAGCAGATTCGGGTACGCAACCTCAATTc  <  4:352546/149‑1 (MQ=255)                                                                                                                                                 |                                                                                                                                                     AAGCGCGACAACACGGTCGGCGAAGGTGACGTGGCCCTGCGCGAGCGCGATGTCGGCACCCTGGGCCAGGGCTTTCTGACCGAGCTGGACCAGGCGGTGGGCATGAAGATGCTGCGCCCCACGGTGATCGACCAGGTGCTCACCCCGCAACATCTGGAACAGGCCGAGGTGGTGCGCAAGGGTGACCAGGTGGTGATCATTGCCCGCAGTGGCAGCCTGAGTGTGCGCATGCCGGGCGAAGCCTTGAGCAAGGGCGGCCTGAGCGAGCAGATTCGGGTACGCAACCTCAATTC  >  NC_002947/4986161‑4986453

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.