New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 4986305	53 (0.900)	3 (0.050)	3/250	NT	5.1%	coding (547/753 nt)	flgA	flagella basal body P‑ring formation protein
	?	NC_002947	= 4986339	61 (1.090)					coding (581/753 nt)	flgA	flagella basal body P‑ring formation protein

CGCGAGCGCGATGTCGGCACCCTGGGCCAGGGCTTTCTGACCGAGCTGGACCAGGCGGTGGGCATGAAGATGCTGCGCCCCACGGTGATCGACCAGGTGCTCACCCCGCAACATCTGGAACAGGCCGAGGTGGTGCGCAAGGGTGACCAGGTGGTGATCATTGCCCGCAGTGGCAGCCTGAGTGTGCGCATGCCGGGCGAAGCCTTGAGCAAGGGCGGCCTGAGCGAGCAGATTCGGGTACGCAACCTCAATTCCAAACGCGTGGTCAAGGCCAGGGTGACCGGCC  >  NC_002947/4986200‑4986485                                                                                                                                            |                                                                                                                                                   cgcgagcgcgaTGTCGGCACCCTGGGCCAGGGCTTTCTGACCGAGCTGGACCAGGCGGTGGGCATGGAGATGCTGCGCCCCACGGTGATCGACCAGGTGCTCACCCCGCAACATCTGGAACAGGCCGAGGTGGTGCGCAAGGGTGAcc                                                                                                                                            <  2:15738/148‑1 (MQ=255)      gcgcgaTGTCGGCACCCTGGGCCAGGGCTTTCTGACCGAGCTGGACCAGGCGGTGGGCATGAAGATGCTGCGCCCCACGGTGATCGACCAGGTGCTCACCCCGCAACATCTGGAACAGGCCGAGGTGGTGCGCAAGGGTGACCAggtgg                                                                                                                                      <  6:46562/149‑1 (MQ=255)        gcgaTGTCGGCACCCTGGGCCAGGGCTTTCTGACCGAGCTGGACCAGGCGGTGGGCATGAAGATGCTGCGCCCCACGGTGATCGAGCAGGTGCTCACCCCGCAACATCTGGAACAGGCCGAGGTGGTGCGCAAGGGTGACCAggtggt                                                                                                                                     >  5:880/1‑148 (MQ=255)        gcgaTGTCGGCACCCTGGGCCAGGGCTTTCTGACCGAGCTGGACCAGGCGGTGGGCATGAAGATGCTGCGCCCCACGGTGATCGACCAGGTGCTCACCCCGCAACATCTGGAACAGGCCGAGGTGGTGCGCAAGGGTGACCAggtggt                                                                                                                                     >  5:83680/1‑148 (MQ=255)          gaTGTCGGCACCCTGGGCCAGGGCTTTCTGACCGAGCTGGACCAGGCGGTGGGCATGAAGATGCTGCGCCCCACGGTGATCGACCAGGTGCTCACCCCGCAACATCTGGAACAGGCCGAGGTGGTGCGCAAGGGTGACCAGGTGGTGAt                                                                                                                                  >  1:93561/1‑149 (MQ=255)          gaTGTCGGCACCCTGGGCCAGGGCTTTCTGACCGAGCTGGACCAGGCGGTGGGCATGAAGATGCTGCGCCCCACGGTGATCGACCAGGTGCTCACCCCGCAACATCTGGAACAGGCCGAGGTGGTGCGCAAGGGTGACCAGGTGGTGAt                                                                                                                                  >  1:191958/1‑149 (MQ=255)            tGTCGGCACCCTGGGCCAGGGCTTTCTGACCGAGCTGGACCAGGCGGTGGGCATGAAGATGCTGCGCCCCACGGTGATCGACCAGGTGCTCACCCCGCAACATCTGGAACAGGCCGAGGTGGTGCGCAAGGGTGACCAGGTGGTGATCa                                                                                                                                >  1:138979/1‑149 (MQ=255)             ctCGGCACCCTCGGCCACCGCTTTCTGACCGACCTGGACCAGGCGGTGGGAATGAAGATGCTGCGCCCCACGGTGATCGACCAGGAGCTCACCCACCACCATCAGGAATAGGCCGACGTCGTCCGCAAGGGTGACCAGGTGGTGAtaaa                                                                                                                               >  6:312036/2‑146 (MQ=255)                 gCACCCTGGGCCAGGGCTTTCTGACCGAGCTGGACCAGGCGGTGGGCATGAAGATGCTGCGCCCCACGGTGATCGACCAGGTGCTCACCCCGCAACATCTGGAACAGGCCGAGGTGGTGCGCAAGGGTGACCAGGTGGTGATCATTGcc                                                                                                                           >  5:95069/1‑149 (MQ=255)                   aCCCTGGGCCAGGGCTTTCTGACCGAGCTGGACCAGGCGGTGGGCATGAAGATGCTGCGCCCCACGGTGATCGACCAGGTGCTCACCCCGCAACATCTGGAACAGGCCGAGGTGGTGCGCAAGGGTGACCAGGTGGTGATCATTGCCCg                                                                                                                         >  2:138766/1‑149 (MQ=255)                     ccTGGGCCAGGGCTTTCTGACCGAGCTGGACCAGGCGGTGGGCATGAAGATGCTGCGCCCCACGGTGATCGACCAGGTGCTCACCCCGCAACATCTGGAACAGGCCGAGGTGGTGCGCAAGGGTGACCAGGTGGTGATCATTGCCCGCa                                                                                                                       <  3:246793/149‑1 (MQ=255)                       tGGGCCAGGGCTTTCTGACCGAGCTGGACCAGGCGGTGGGCATGAAGATGCTGCGCCCCACGGTGATCGACCAGGTGCTCACCCCGCAACATCTGGAACAGGCCGAGGTGGTGCGCAAgggtga                                                                                                                                              >  6:15276‑M2/1‑118 (MQ=255)                           ccAGGGCTTTCTGACCGAGCTGGACCAGGCGGTGGGCATGAAGATGCTGCGCCCCACGGTGATCGACCAGGTGCTCACCCCGCAACATCTGGAACAGGCCGAGGTGGTGCGCAAGGGTGACCAGGTGGTGATCATTTCCCGCATTggaa                                                                                                                 >  3:201788/1‑147 (MQ=255)                            cAGGGCTTTCTGACCGAGCTGGACCAGGCGGTGGGCATGAAGATGCTGCGCCCCACGGTGATCGACCAGGTGCTCACCCCGCAACATCTGGAACAGGCCGAGGTGGTGCGCAAGGGTGACCAGGTGGTGATCATTGCCCGCAGTGGCAg                                                                                                                >  4:327484/1‑149 (MQ=255)                                 cTTTCTGACCGAGCTGGACCAGGCTGTGGGCATGAAGATGCTGCGCCCCACGGTGATCTACCAGGTGCTCACCCCGCAACATCTGGAACAGGCCGAGGTGGTGCGCAAGGGTTACCAGGTGGTGATCATTGCCCGCAGTTGCAGCCTGa                                                                                                           <  8:112111/149‑1 (MQ=255)                                 cTTTCTGACCGAGCTGGACCAGGCGGTGGGCATGAAGATGCTGCGCCCCACGGTGATCGACCAGGTGCTCACCCCGCAACATCTGGAACAGGCCGAGGTGGTGCGCAAGGGTGACCAGGTGGTGATCATTGCCCGCAGTGGCAGCCt                                                                                                             >  5:377291/1‑147 (MQ=255)                                    tCTGACCGAGCTGGACCAGGCGGTGGGCATGAAGATGCTGCGCCCCACGGTGATCGACCAGGTGCTGACCCCGCAACATCTGGAACAGGCCGAGGTGGTGCTCAAGGGAGACCAGGTTGTGATCATTGCGCGCAGTGGCAGCCTGAgt                                                                                                         <  8:93533/148‑1 (MQ=255)                                    tCTGACCGAGCTGGACCAGGCGGTGGGCATGAAGATGCTGCGCCCCACGGTGATCGACCAGGTGCTCACCCCGCAACATCTGGAACAGGCCGAGGTGGTGCGCAAGGGTGACCAGGTGGTGATCATTGCCCGCAGTGGCAGCCTGAgt                                                                                                         <  7:212910/148‑1 (MQ=255)                                         ccGAGCTGGACCAGGCGGTGGGCATGAAGATGCTGCGCCCCACGGTGATCGACCAGGTGCTCACCCCGCAACATCTGGAACAGGCCGAGGTGGTGCGCAAGGGTGACCAGGTGGTGATCATTGCCCGCAGTg                                                                                                                    >  8:330896/1‑132 (MQ=255)                                         ccGAGCTGGACCAGGCGGTGGGCATGAAGATGCTGCGCCCCACGGTGATCGACCAGGTGCTCACCCCGCAACATCTGGAACAGGCCGAGGTGGTGCGCAAGGGTGACCAGGTGGTGATCATTGCCCGCAGTg                                                                                                                    <  7:330896/132‑1 (MQ=255)                                                 gACCAGGCGGTGGGCATGAAGATGCTGCGCCCCACGGTGATCGACCAGGTGCTCACCCCGCAACATCTGGAACAGGCCGAGGTGGTGCGCAAGGGTGACCAGGTGGTGATCATTGCCCGCAGTGGCAGCCTGAGTGTGCGCATGCCgg                                                                                            <  1:273761/148‑1 (MQ=255)                                                 gACCAGGCGGTGGGCATGAAGATGCTGCGCCCCACGGTGATCGACCAGGTGCTCACCCCGCAACATCTGGAACAGGCCGAGGTGGTGCGCAAGGGTGACCAGGTGGTGATCATTGCCCGCAGTGGCAGCCTGAGTGTGCCCATGCCgg                                                                                            <  2:234385/148‑1 (MQ=255)                                                 gACCAGGCGGTGGGCATGAAGATGCTGCGCCCCACGGTGATCGACCAGGTGCTCACCCCGCAACATCTGGAACAGGCCGAGGAGGTGCGCAAGGGTGACCAGGTGGTGATCATTGCCCGCAGTGGCAGCCTGAGTGTGCGCATGCCgg                                                                                            >  2:273761/1‑148 (MQ=255)                                                     aGGCGGTGGGCATGAAGATGCTGCGCCCCACGGTGATCGACCAGGTGCTCACCCCGCAACATCTGGAACAGGCCGAGGTGGTGCGCAAGGGTGACCAGGTGGTGATCATTGCCCGCAGTGGCAGCCTGAGTGTGCGCATGCCGGGCGaa                                                                                       <  2:191958/149‑1 (MQ=255)                                                          gTGGGCATGAAGATGCTGCGCCCCACGGTGATCGACCAGGTGCTCACCCCGCAACATCTGGAACAGGCCGAGGTGGTGCGCAAGGGTGACCAGGTGGTGATCATTGCCCGCAGTGGCAGCCTGAGTGTGCGCATGCCGGGCGAAGCCtt                                                                                  >  3:109812/1‑149 (MQ=255)                                                           tGGGCATGAAGATGCTGCGCCCCACGGTGATCGACCAGGTGCTCACCCCGCAACATCTGGAACAGGCCGAGGTGGTGCGCAAGGGTGACCAGGTGGTGATCATTGCCCGCAGTGGCAGCCTGAGTGTGCGCATGCCGGGCGAAGCCTTg                                                                                 <  6:95069/149‑1 (MQ=255)                                                             ggCATGAAGATGCTGCGCCCCACGGTGATCGACCAGGTGCTCACCCCGCAACATCTGGAACAGGCCGAGGTGGTGCGCAAGGGTGACCAGGTGGTGATCCTTGCCCGCAGTGGCAGCCTGAGTGTGCGCATGCCGGGCGAAGCCTTGa                                                                                <  6:880/148‑1 (MQ=255)                                                               cATGAAGATGCTGCGCCCCACGGTGATCGACCAGGTGCTCACCCCGCAACATCTGGAACAGGCCGAGGTGGTGCGCAAGGGTGACCAGGTGGTGATCATTGCCCGCAGTGGCAGCCTGAGTGTGCGCATGCCGGGCGAAGCCTTGAGc                                                                              >  3:174575/1‑148 (MQ=255)                                                                aTGAAGATGCTGCGCCCCACGGTGATCGACCAGGTGCTCACCCCGCAACATCTGGAACAGGCCGAGGTGGTGCGCAAGGGTGACCAGGTGGTGATCATTGCCCGCAGTGGCAGCCTGAGTGTGCGCATGCCGGGCGAAGCCTTGAGc                                                                              >  7:216594/1‑147 (MQ=255)                                                                aTGAAGATGCTGCGCCCCACGGTGATCGACCAGGTGCTCACCCCGCAACATCTGGAACAGGCCGAGGTGGTGCGCAAGGGTGACCAGGTGGTGATCATTGCCCGCAGTGGCAGCCTGAGTGTGCGCATGCCGGGCGAAGCCTTGAGCaa                                                                            <  1:12820/149‑1 (MQ=255)                                                                  gAAGATGCTGCGCCCCACGGTGATCGACCAGGTGCTCACCCCGCAACATCTGGAACAGGCCGAGGTGGTGCGCAAGGGTGACCAGGTGGTGATCATTGCCCGCAGTGGCAGCCTGAGTGTGCGCATGCCGGGCGAAGCCTTGAGCAAgg                                                                          >  7:266901/1‑149 (MQ=255)                                                                  gAAGATGCTGCGCCCCACGGTGATCGACCAGGTGCTCACCCCGCAACATCTGGAACAGGCCGAGGTGGTGCGCAAGGGTGACCAGGTGGTGATCATTGCCCGCAGTGGCAGCCTGAGTGTGCGCATGCCGGGCGAAGCCTTGAGCAAgg                                                                          >  8:312448/1‑149 (MQ=255)                                                                          tgcGCCCCACGGTGATCGACCAGGTGCTCACCCCGCAACATCTGGAACAGGCCGAGGTGGTGCGCAAGGGTGACCAGGTGGTGGTCATTGCCCGCAGTGGCAGCCTGAGTGTGCGCATGCCGGGCGAAGCCTTGAGCAAGGGCGGCCt                                                                   >  3:352546/1‑148 (MQ=255)                                                                          tgcGCCCCACGGTGATCGACCAGGTGCTCACCCCGCAACATCTGGAACAGGCCGAGGTGGTGCGCAAGGGTGACCAGGTGGTGATCATTGCCCGCAGTGGCAGCCTGAGTGTGCGCATGCCGGGCGAAGCCTTGAGCAAGGGCGGCCt                                                                   >  4:347896/1‑148 (MQ=255)                                                                            cgcCCCACGGTGATCGACCAGGTGCTCACCCCGCAACATCTGGAACAGGCCGAGGTGGTGCGCAAGGGTGACCAGGTGGTGATCATTGCCCGCAGTGGCAGCCTGAGTGTGCGCATGCCGGGCGAAGCCTTGAGCAAGGGCGGCCTga                                                                 <  2:22152/148‑1 (MQ=255)                                                                            cgacccACGGTGATCGACGAGGTGCTGACCCCGCTTCATCTGGAATAGGCCGAGGTGGTGAGCAAGGGTGTCCAGGTGGTTATGTTTGCGCGGAGTGGCAGGCTTTGTGTGCGCATGCCGGGCGAAGCCTTGTGCAAGGGCGGCATgag                                                                <  5:312036/146‑1 (MQ=255)                                                                               cccACGGTGATCGACCAGGTGCTCACCCCGCAACATCTGGAACAGGCCGAGGTGGTGCGCAAGGGTGACCAGGTGGTGATCATTGCCCGCAGTGGCAGCCTGAGTGTGCGCATGCCGGGCGAAGCCTTGAGCAAGGGCGGCCTgagcga                                                             <  8:266901/149‑1 (MQ=255)                                                                               cccACGGTGATCGACCAGGTGCTCACCCCGCAACATCTGGAACAGGCCGAGGTGGTGCGCAAGGGTGACCAGGTGGTGATCATTGCCCGCAGTGGCAGCCTGAGTGTGCGCATGCCGGGCGAAGCCTTGAGCAAGGGCGGCCTgagc                                                               >  3:114678/1‑147 (MQ=255)                                                                                 cACGGTGATCGACCAGGTGCTCACCCCGCAACATCTGGAACAGGCCGAGGTGGTGCGCAAGGGTGACCAGGTGGTGATCATTGCCCGCAGTGGCAGCCTGAGTGTGCGCATGCCGGGCGAAGCCTTGa                                                                                <  7:215984/128‑1 (MQ=255)                                                                                 cACGGTGATCGACCAGGTGCTCACCCCGCAACATCTGGAACAGGCCGAGGTGGTGCGCAAGGGTGACCAGGTGGTGATCATTGCCCGCAGTGGCAGCCTGAGTGTGCGCATGCCGGGCGAAGCCTTGa                                                                                >  8:215984/1‑128 (MQ=255)                                                                                 cACGGTGATCGACCAGGTGCTCACCCCGCAACATCTGGAACAGGCCGAGGTGGTGCGCAAGGGTGACCAGGTGGTGATCATTGCCCGCAGTGGCAGCCTGAGTGTGCGCATGCCGGGCGAAGCCCTGAGCAAGGGCGGCCTgagcgag                                                            >  8:22210/1‑148 (MQ=255)                                                                                        aTCGACCAGGTGCTCACCCCGCAACATCTGGAACAGGCCGAGGTGGTGCGCAAGGGTGACCAGGTGGTGATCATTGCCCGCAGTGGCAGCCTGAGTGTGCGCATGCCGGGCGAAGCCTTGAGCAAGGGCGGCCTGAGCGAGCAGATTCg                                                    >  4:185105/1‑149 (MQ=255)                                                                                          cGACCAGGTGCTCACCCCGCAACATCTGGAACAGGCCGAGCTGGTGCGCAAGGGTGACCAGGTGGTGATCATTGCCCGCAGTGGCAGCCTGAGAGTGCGCATGCCGGGCGAAGCCTTGAGCAAGGGCGGCCTGAGCGAGCAGATTCgg                                                   >  3:155325/1‑148 (MQ=255)                                                                                             ccAGGTGCTCACCCCGCAACATCTGGAACAGGCCGAGGTGGTGCGCAAGGGTGACCAGGTGGTGATCATTGCCCGCAGTGGCAGCCTGAGTGTGCGCATGCCGGGCGAAGCCCTGAGCAAGGGCGGCCTGAGCGAGCAGATTCGGGTAc                                               <  7:22210/149‑1 (MQ=255)                                                                                                 gTGCTCACCCCGCAACATCTGGAACAGGCCGAGGTGGTGCGCAAGGGTGACCAGGTGGTGATCATTGCCCGCAGTGGCAGCCTGAGTGTGCGCATGCCGGGCGAAGCCTTGAGCAAGGGCGGCCTGAGCGAGCAGATTCGGGTACGCaa                                           >  3:353827/1‑149 (MQ=255)                                                                                                 gTGCTCACCCCGCAACATCTGGAACAGGCCGAGGTGGTGCGCAAGGGTGACCAGGTGGTGATCATTGCCCGCAGTGGCAGCCTGAGTGTGCGCATGCCGGGCGAAGCCTTGAGCAAGGGCGGCCTGAGCGAGCAGATTCGGGTACGCaa                                           >  1:289456/1‑149 (MQ=255)                                                                                                  tGCTCACCCCGCAACATCTGGAACAGGCCGAGGTGGTGCGCAAGGGTGACCAGGTGGTGATCATTGCCCGCAGTGGCAGCCTGAGTGTGCGCATGCCGGGCGAAGCCTTGAGCAAGGGCGGCCTGAGCGAGCAGATTCGGGTACGCAAc                                          <  3:327484/149‑1 (MQ=255)                                                                                                   gCTCACCCCGCAACATCTGGAACAGGCCGAGGTGGTGCGCAAgggtgagcacctggtcgatcaccgtggggcgcagcatcttcatgcccaccgcctggtccagctcggtcagaaagccctggcccagggtgccgacatcgcgctcgcg                                          <  7:186356‑M2/148‑107 (MQ=255)                                                                                                     tCACCCCGCAACATCTGGAACAGGCCGAGGTGGTGCGCAAGGGTGACCAGGTGGTGATCATTGCCCGCAGTGGCAGCCTGAGTGTGCGCATGCCGGGCGAAGCCTTGAGCAAGGGCGGCCTGAGCGAGCAGATTCGGGTACGCAACCt                                        >  8:117783/1‑148 (MQ=255)                                                                                                      cACCCCGCAACATCTGGAACAGGCCGAGGTGGTGCGCAAgggtgagcacctggtcgatcaccgtggggcgcagcatcttcatgcccaccgcctggtccagctcggtcagaaagccctggcccagggtgccgacatcgcgctcgcgcagg                                      >  8:186356‑M2/1‑39 (MQ=255)                                                                                                       aCCCCGCAACATCTGGAACAGGCCGAGGTGGTGCGCAAgggtgagcacctggtcgatcaccgtggggcgcagcatcttcatgcccaccgcctggtccagctcggtcagaaagccctggcccagggtgccgacatcgcgctcgcgcgggg                                     <  1:158485‑M2/149‑112 (MQ=255)                                                                                                       aCCCCGCAACATCTGGAACAGGCCGAGGTGGTGCGCAAGGGTGACCAGGTGGTGATCATTGCCCGCAGTGGCAGCCTGAGTGTGCGCATGCCGGGCGAAGCCTTGAGCAAGGGCGGCCTGAGCGAGCAGATTCGGGTACGCAACCTCaa                                     <  4:109812/149‑1 (MQ=255)                                                                                                       aCCCCGCAACATCTGGAACAGGCCGAGGTGGTGCGCAAGGGTGACCAGGTGGTGATCATTGCCCGCAGTGGCAGCCTGAGTGTGCGCATGCCGGGCGAAGCCTTGAGCAAGGGCGGCCTGAGCGAGCAGATTCGGGTACGCAACCTCaa                                     >  1:294332/1‑149 (MQ=255)                                                                                                          ccGCAACATCTGGAACAGGCCGAGGTGGTGCGCAAGGGTGACCAGGTGGTGGTCATTGCCCGCAGTGGCAGCCTGAGTGTGCGCATGCCGGGCGAAGCCTTGAGCAAGGGCGGCCTGAGCGAGCAGATTCGGGTACGCAACCTCAATTc                                  <  4:352546/149‑1 (MQ=255)                                                                                                           cGCAACATCTGGAACAGGCCGCGGTGGTGCGCAAGGGTGACCAGGTGGTGATCATTGCCCGCAGTGGCAGCCTGAGTGTGCGCATGCCGGGCGAAGCCTTGAGCAAGGGCGGCCTGAGCGAGCAGATTCGGGTACGCAACCTCAATTcc                                 <  2:138979/149‑1 (MQ=255)                                                                                                           cGCAACATCTGGAACAGGCCGAGGTGGTGCGCAAGGGTGACCAGGTGGTGATCATTGCCCGCAGTGGCAGCCTGAGTGTGCGCATGCCGGGCGAAGCCTTGAGCAAGGGCGGCCTGAGCGAGCAGATTCGGGTAc                                               >  7:328014/1‑135 (MQ=255)                                                                                                           cGCAACATCTGGAACAGGCCGAGGTGGTGCGCAAGGGTGACCAGGTGGTGATCATTGCCCGCAGTGGCAGCCTGAGTGTGCGCATGCCGGGCGAAGCCTTGAGCAAGGGCGGCCTGAGCGAGCAGATTCGGGTAc                                               <  8:328014/135‑1 (MQ=255)                                                                                                                    tGGAACAGGCCGAGGTGGTGCGCAAGGGTGACCAGGTGGTGATCATTGCCCGCAGTGGCAGCCTGAGTGTGCGCATGCCGGGCGAAGCCTTGAGCAAGGGCGGCCTGAGCGAGCAGATTCGGGTACGCAACCTCAATTCCAAACGCGTg                        >  3:225693/1‑149 (MQ=255)                                                                                                                      gAACAGGCCGAGGTGGTGCGCAAGGGTGACCAGGTGGTGATCATTGCCCGCAGTGGCAGCCTGAGTGTGCGCATGCCGGGCGAAGCCTTGAGCAAGGGCGGCCTGAGCGAGTAGATTCGGGTACGCAACCTCAATTCCAAACGCGTg                        <  4:114678/147‑1 (MQ=255)                                                                                                                      gAACAGGCCGAGGTGGTGCGCAAGGGTGACCAGGTGGTGATCATTGCCCGCAGTGGCAGCCTGAGTGTGCGCATGCCGGGCGAAGCCTTGAGCAAGGGCGGCCTGAGCGAGCAGATTCGGGTACGCAACCt                                        <  7:282854/131‑1 (MQ=255)                                                                                                                      gAACAGGCCGAGGTGGTGCGCAAGGGTGACCAGGTGGTGATCATTGCCCGCAGTGGCAGCCTGAGTGTGCGCATGCCGGGCGAAGCCTTGAGCAAGGGCGGCCTGAGCGAGCAGATTCGGGTACGCAACCt                                        >  8:282854/1‑131 (MQ=255)                                                                                                                      gAACAGGCCGAGGTGGTGCGCAAGGGTGACCAGGTGGTGATCATTGCCCGCAGTGGCAGCCTGAGTGTGCGCATGCCGGGCGAAGCCTTGAGCAAGGGCGGCCTGAGCGAGCAGATTCGGGTACGCAACCTCAATTCCAAACGCGTg                        <  7:117783/147‑1 (MQ=255)                                                                                                                         cAGGCCGAGGTGGTGCGCAAGGGTGACCAGGTGGTGATCATTGCCCGCAGTGGCAGCCTGAGTGTGCGCATGCCGGGCGAAGCCTTGAGCAAGGGCGGCCTGAGCGAGCAGATTCGGGTACGCAACCTCAATTCCAAACGCGTGGTCaa                   <  1:138766/149‑1 (MQ=255)                                                                                                                          aGGCCGAGGTGGTGCGCAAGGGTGACCAGGTGGTGATCATTGCCCGCAGTGGCAGCCTGAGTGTGCGCATGCCGGGCGAAGCCTTGAGCAAGGGCGGCCTGAGCGAGCAGATTCGGGTACGCAACCTCAATTCCAAACGCGTGGTCAAG                  <  7:312448‑M1/149‑1 (MQ=255)                                                                                                                              cGAGGGGGTGCGCAAGGGTGACCAGGTGGTGATCATTGCCCGCAGTGGCAGCCTGAGTGTGCGCATGCCGGGCGAAGCCTTGAGCAAGGGCGGCCTGAGCGAGCAGATTCg                                                    <  2:366868/111‑1 (MQ=255)                                                                                                                                aGGTGGTGCGCAAGGGTGACCAGGTGGTGATCATTGCCCGCAGTGGCAGCCTGAGTGTGCGCATGCCGGGCGAAGCCTTGAGCAAGGGCGGCCTGAGCGAGCAGATTCGGGTACGCAACCTCAATTCCAAACGCGTGGTCAAGGCCAgg            <  3:185105/149‑1 (MQ=255)                                                                                                                                aGGTGGTGCGCAAGGGGGACCAGGGGGTGATCATTGCCCGCAGGGGCAGCCTGAGGGGGCGCATGCCGGGCGAAGCCTTGAGCAAGGGCGGCCTGACCGAGCAGATTCGGGTACGCAACCTCAATTCCAAACGCGTGGTCAACGCCacg            <  2:289456/149‑3 (MQ=255)                                                                                                                                      tgCGCAAGGGTGACCAGGTGGTGATCATTGCCCGCAGTGGCAGCCTGAGTGTGCGCATGCCGGGCGAAGCCTTGAGCAAGGGCGGCCTGAGCGAGCAGATTCGGGTACGCAACCTCAATTCCAAACGCGTGGTCAAGGCCagggccgg       >  5:34427‑M1/1‑140 (MQ=255)                                                                                                                                         gcAAGGGTGACCAGGTGGTGATCATTGCCCGCAGTGGCAGCCTGAGTGTGCGCATGCCGGGCGAAGCCTTGAGCAAGGGCGGCCTGAGCGAGCAGATTCGGGTACGCAACCTCAATTCCAAACGCGTGGTCAAGGCCAGGGTGACCGGc   >  3:133424/1‑149 (MQ=255)                                                                                                                                          cAAGGGTGACCAGGTGGTGATCATTGCCCGCAGTGGCAGCCTGAGTGTGCGCATGCCGGGCGAAGCCTTGAGCAAGGGCGGCCTGAGCGAGCAGATTCGGGTACGCAACCTCAATTCCAAACGCGTGGTCAAGGCCAGGGTGACCGGcc  >  7:292919/1‑149 (MQ=255)                                                                                                                                            |                                                                                                                                                   CGCGAGCGCGATGTCGGCACCCTGGGCCAGGGCTTTCTGACCGAGCTGGACCAGGCGGTGGGCATGAAGATGCTGCGCCCCACGGTGATCGACCAGGTGCTCACCCCGCAACATCTGGAACAGGCCGAGGTGGTGCGCAAGGGTGACCAGGTGGTGATCATTGCCCGCAGTGGCAGCCTGAGTGTGCGCATGCCGGGCGAAGCCTTGAGCAAGGGCGGCCTGAGCGAGCAGATTCGGGTACGCAACCTCAATTCCAAACGCGTGGTCAAGGCCAGGGTGACCGGCC  >  NC_002947/4986200‑4986485

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.