New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5816290	48 (0.820)	3 (0.050)	3/244	NT	5.7%	coding (100/624 nt)	PP_5092	NLP/P60 protein
	?	NC_002947	= 5816308	54 (0.980)					coding (118/624 nt)	PP_5092	NLP/P60 protein

TTATAAAGTTGCGCGCCAACACATAACTATTCATAAGAGCTTCATCTATGCCGCCTTTGATCAAGACATGGCTGACCCTCTGCCTATTATTGCCCCTGGCCGCCCACGCCACCAATCGTGAGCAACGTCTTCCCAATGGTTTCACCGGCTATACGACCA‑ACGCCTCGGTGAAACGCGCACCAGTCAAACAGACCGCGCTACGCGCCCGCCCAGGCAATGCCGCCAGCAGCCGCGGTGCGAATGTCGCCGCCATGTCGCCTAAGCAAAGCAGCGATGTGCTGAGCCGTGCGGTA  >  NC_002947/5816144‑5816436                                                                                                                                                   |                                                                                                                                                    ttATAAAGTTGCGCGCCAACACATAACTATTCATAAGAGCTTCATCTATGCCGCCTTTGATCAAGACATGGCTGACCCTCTGCCTATTATTGCCCCTGGCCGCCCACGCCACCAATCGTGAGCAACGTCTTCCCAATGGTTTCACCGGc                                                                                                                                                   <  5:91398/149‑1 (MQ=255)    taAAGTTGCGCGCCAACACATAACTATTCATAAGAGCTTCATCTATGCCGCCTTTGATCAAGACATGGCTGACCCTCTGCCTATTATTGCCCCTGGCCGCCCACGCCACCAATCGTGAGCAACGTCTTCCCAATGGTTTCACCGGCta                                                                                                                                                 >  5:292875/1‑148 (MQ=255)         ttGCGCGCCAACACATAACTATTCATAAGAGCTTCATCTATGCCGCCTTTGATCAAGACATGGCTGACCCTCTGCCTATTATTGCCCCTGGCCGCCCATGCCACCAATCGTGAGCAACGTCTTCCCAATGGTTTCACCGGCTATACGAc                                                                                                                                           >  6:354080/1‑149 (MQ=255)         ttGCGCGCCAACACATAACTATTCATAAGAGCTTCATCTATGCCGCCTTTGATCAAGACATGGCTGACCCTCTGCCTATTATTGCCCCTGGCCGCCCATGCCACCAATCGTGAGCAACGTCTTCCCAATGGTTTCACCGGCTATACGAc                                                                                                                                           <  5:354080/149‑1 (MQ=255)                    aacatAACTATTAATAAGAGCTTAATCTATGCCGCCTTTGATCAAGACATGGCTGCCCCTCTGCCTATTATTGCCCCTGGCCGCCCACGCGACGAATCGTGAGCAACGTCTTCCCAATGGTTTCACCTGGTATTCGACCA‑ACGCCTcgg                                                                                                                               >  6:81002‑M2/2‑146 (MQ=255)                               tCATAAGAGCTTCATCTATGCCGCCTTTGATCAAGACATGGCTGACCCTCTGCCTATTATTGCCCCTGGCCGCCCACGCCACCAATCGTGAGCAACGTCTTCCCAATGGGTTCACCGaggcgttggtcgtatagccggtgaaaccatt                                                                                                                      <  7:66896‑M1/148‑32 (MQ=255)                                 aTAAGAGCTTCATCTATGCCGCCTTTGATCAAGACATGGCTGACCCTCTGCCTATTATTGCCCCTGGCCGCCCACGCCACCAATCGTGAGCAACGTCTTCCCAATGGTTTCACCGGCTATACGACCA‑ACGCCTCGGTGAAACGCGCAc                                                                                                                   >  7:189106/1‑148 (MQ=255)                                   aaGAGCTTCATCTATGCCGCCTTTGATCAAGACATGGCTGACCCTCTGCCTATTATTGCCCCTGGCCGCCCACGCCACCAATCGTGCGCAACGTCTTCCCAATGGTTTCACCGGCTATACGACCA‑ACGCCTCGGTGAAACGCGCACCAg                                                                                                                >  2:223610/1‑149 (MQ=255)                                   aaGAGCTTCATCTATGCCGCCTTTGATCAAGACATGGCTGACCCTCTGCCTATTATTGCCCCTGGCCGCCCACGCCACCAATCGTGAGCAACGTCTTCCCAATGGTTTCACCGGCTATACGACCA‑ACGCCTcg                                                                                                                                <  5:188726‑M2/133‑3 (MQ=255)                                   aaGAGCTTCATCTATGCCGCCTTTGATCAAGACATGGCTGACCCTCTGCCTATTATTGCCCCTGGCCGCCCACGCCACCAATCGTGAGCAACGTCTTCCCAATGGTTTCACCGGCTATACGACCA‑ACGCCTcg                                                                                                                                >  6:188726‑M2/1‑131 (MQ=255)                                          tCATCTATGCCGCCTTTGATCAAGACATGGCTGACCCTCTGCCTATTATTGCCCCTGGCCGCCCACGCCACCAATCGTGAGCAACGTCTTCCCAATGGTTTCACCGGCTATACGACCA‑ACGCCTCGGTGAAACGCGCACCAGTCaaa                                                                                                           >  4:227113/1‑147 (MQ=255)                                                aTGCCGCCTTTGATCAAGACATGGCTGACCCTCTGCCTATTATTGCCCCTGGCCGCCCACGCCACCAATCGTGAGCAACGTCTTCCCAATGGTTTCACCGGCTATACGACCA‑ACGCCTCGGTGAAACGCGCACCAGTc                                                                                                              >  4:38850/1‑138 (MQ=255)                                                aTGCCGCCTTTGATCAAGACATGGCTGACCCTCTGCCTATTATTGCCCCTGGCCGCCCACGCCACCAATCGTGAGCAACGTCTTCCCAATGGTTTCACCGGCTATACGACCA‑ACGCCTCGGTGAAACGCGCACCAGTc                                                                                                              <  3:38850/138‑1 (MQ=255)                                                 tGCCTCCTTTGATCAAGACATGGCTGACCCTCTGCCTATTATTGCCCCTGGCCGCCCACGCCACCAATCGTGAGCAACGTCTTCCCAATGGTTTCACCGGCTATACGACCATACGCCTCGGTGAAACGCGCACCAGTCAAACAGAc                                                                                                      <  1:240365/146‑1 (MQ=255)                                                    cgccTTTGATCAAGACATGGCTGACCCTCTGCCTATTATTGCCCCTGGCCGCCCACGCCACCAATCGTGAGCAACGTCTTCCCAATGGTTTCACCGGCTATACGACCA‑Ac                                                                                                                                      <  2:216516/110‑1 (MQ=255)                                                    cgccTTTGATCAAGACATGGCTGACCCTCTGCCTATTATTGCCCCTGGCCGCCCACGCCACCAATCGTGAGCAACGTCTTCCCAATGGTTTCACCGGCTATACGACCA‑Ac                                                                                                                                      >  1:216516/1‑110 (MQ=255)                                                    cgccTTTGATCAAGACATGGCTGACCCTCTGCCTATTATTGCCCCTGGCCGCCCACGCCACCAATCGTGAGCAACGTCTTCCCAATGGTTTCACCGGCTATACGACCA‑ACGACTCGGTGAAACGCGAACCAGTCAAACAGACCGCGCTa                                                                                               >  6:162129/1‑149 (MQ=255)                                                       cTTTGATCAAGACATGGCTGACCCTCTGCCTATTATTGCCCCTGGCCGCCCACTCCACCAATCGTGAGCAACGTCTTCCCAATGGTTTCACCGGCTATACGACCA‑ACGCCTCGGTGAAACGCGCACCAGTCAAACAGACCGCGCTAc                                                                                              <  8:118443/147‑1 (MQ=255)                                                               aaGACATGGCTGACCCTCTGCCTATTATTGCCCCTGGCCGCCCACGCCACCAATCGTGAGCAACGTCTTCCCAATGGTTTCACCGGCTATACGACCA‑ACGCCTCGGTGAAACGCGCa                                                                                                                    <  4:232640/117‑1 (MQ=255)                                                               aaGACATGGCTGACCCTCTGCCTATTATTGCCCCTGGCCGCCCACGCCACCAATCGTGAGCAACGTCTTCCCAATGGTTTCACCGGCTATACGACCA‑ACGCCTCGGTGAAACGCGCa                                                                                                                    >  3:232640/1‑117 (MQ=255)                                                               aaGACATGGCTGACCCTCTGCCTATTATTGCCCCTGGCCGCCCACGCCACAAATCGTGAGCAACGTCTTCCCAATGGTTTCACCGaggcgttggtcgtatagccggtgaaaccattg                                                                                                                     >  7:326599‑M1/1‑85 (MQ=255)                                                               aaGACATGGCTGACCCTCTGCCTATTATTGCCCCTGGCCGCCCACGCCACAAATCGTGAGCAACGTCTTCCCAATGGTTTCACCGaggcgttggtcgtatagccggtgaaaccattg                                                                                                                     <  8:326599‑M1/117‑33 (MQ=255)                                                                 gACATGGCTGACCCTCTGCCTATTATTGCCCCTGGCCGCCCACGCCACCAATCGTGAGCAACGTCTTCCCAATGGTTTCACCGGCTATACGACCA‑ACGCCTCGGTGAAACGCGCACCAGTCAAACAGACCGCGCTACGCGCCCGCCCAg                                                                                  <  1:78825/149‑1 (MQ=255)                                                                  aCATGGCTGACCCTCTGCCTATTATTGCCCCTGGCCGCCCACGCCACCAATCGTGAGCAACGTCTTCCCAATGGTTTCACCGGCTATACGACCA‑ACGCCTCGGTGAAACGCGCACCAGTCAAACAGACCGCGCTACGCGCCCGCCCAgg                                                                                 <  3:227113/149‑1 (MQ=255)                                                                      ggCTGACCCTCTGCCTATTATTGCCCCTGGCCGCCCACGCCACCAATCGTGAGCAACGTCTTCCCAATGGTTTCACCGGCTATACGACCA‑ACGCCTCGGTGAAACGCGCACCAGTCAAACAGACCGCGCTACGCGCCCGCCCAGGCAAt                                                                             >  8:264620/1‑149 (MQ=255)                                                                       gCTGACCCTCTGCCTATTATTGCCCCTGGCCGCCCACGCCACCAATCGTGAGCAACGTCTTCCCAATGGTTTCACCGGCTATACGACCA‑ACGCCTCGGTGAAACGCGCACCAGTCAAACAGACCGCGCTACGCGCCCGCCCAGGCAAt                                                                             <  6:131660/148‑1 (MQ=255)                                                                       gCTGACCCTCTGCCTATTATTGCCCCTGGCCGCCCACGCCACCAATCGTGAGCAACGTCTTCCCAATGGTTTCACCGGCTATACGACCA‑ACGCCTCGGTGAAACGCGCACCAGTCAAACAGACCGCGCTACGCGCCCGCCCAGGCAATg                                                                            >  4:29680/1‑149 (MQ=255)                                                                        cTGACCCTCTGCCTATTATTGCCCCTGGCCGCCCACGCCACCAATCGTGAGCAACGTCTTCCCAATGGTTTCACCGGCTATACGACCA‑ACGCCTCGGTGAAACGCGCACCAGTCAAACAGACCGCGCTACGCGCCCGCCCAGGCAATg                                                                            >  1:1426/1‑148 (MQ=255)                                                                        cTGACCCTCTGCCTATTATTGCCCCTGGCCGCCCACGCCACCAATCGTGAGCAACGTCTTCCCAATGGTTTCACCGGCTATACGACCA‑ACGCCTCGGTGAAACGCGCACCAGTCAAACAGACCGCGCTACGCGCCCGCCCAGGCAATg                                                                            <  2:1426/148‑1 (MQ=255)                                                                           aCCCTCTGCCTATTATTGCCCCTGGCCGCCCACGCCACCAATCGTGAGCAACGTCTTCCCAATGGTTTCACCGGCTATACGACCA‑ACGCCTCGGTGAAACGCGCACCAGTCAAACAGACCGCGCTACGCGCCCGCCCAGGCAATgccgc                                                                        >  2:5953/1‑149 (MQ=255)                                                                                   ccTATTATTGCCCCTGGCCGCCCACGCCACCAATCGTGAGCAACGTCTTCCCAATGGTTTCACCGGCTATACGACCA‑ACGCCTCGGTGAAACGCGCACCAGTCAAACAGACCGCGCTACGCGCCCGCCCa                                                                                   <  1:144491/130‑1 (MQ=255)                                                                                         attGCCCCTGGCCGCCCACGACACCAATCGTGAGCAACGTCTTCCCAATGTTTTCACCGGCTATACGACCA‑ACGCCTCCGTGAAACGCGCACCAGACAAACACACCGCGCTACGCGCCCCCCCAGGCAATGACGCCAGCAGCCGCGGTg                                                          >  4:231899/1‑149 (MQ=255)                                                                                             ccccTGGCCGCCCACGCCACCAATCGTGAGCAACGTCTTCCCAATGGTTTCACCGGCTATACGACCA‑ACGCCTCGGTGAAACGCGCACCAGTCAAACAGACCGCGCTACGCGCCCGCCCAGGCAATGCCGCCAGCAGCCGCGGTGc                                                         <  8:182949/146‑1 (MQ=255)                                                                                             ccccTGGCCGCCCACGCCACCAATCGTGAGCAACGTCTTCCCAATGGTTTCACCGGCTATACGACCA‑ACGCCTCGGTGAAACGCGCACCAGTCAAACAGACCGCGCTACGCGCCCGCCCAGGCAATGCCGCCAGCAGCCGCGGTGc                                                         >  7:182949/1‑146 (MQ=255)                                                                                              cccTGGCCGCCCACGCCACCAATCGTGAGCAACGTCTTCCCAATGGTTTCACCGGCTATACGACCA‑ACGCCTCGGTGAAACGCGCACCAGTCAAACAGACCGCGCTACGCGCCCGCCCAGGCAATGCCGCCAGCAGCCGCGGTGCGAAt                                                     <  7:264620/149‑1 (MQ=255)                                                                                               ccTGGCCGCCCACGCCACCAATCGTGAGCAACGTCTTCCCAATGGTTTCACCGGCTATACGACCA‑ACGCCTCGGTGAAACGCGCACCAGTCAAACAGACCGCGCTACGCGCCCGCCCAGGCAATGCCGCCAGCAGCCGCGGTGCGAAt                                                     >  1:39939/1‑148 (MQ=255)                                                                                                            gCCACCAATCGTGAGCAACGTCTTCCCAATGGTTTCACCGGCTATACGACCA‑ACGCCTCGGTGAAACGCGCACCAGTCAAACAGACCGCGCTACGCGCCCGCCCAGGCAATGCCGCCAGCAGCCGCGGTGCGAATGTCGCCGCCATGTc                                       <  2:49217/149‑1 (MQ=255)                                                                                                            gCCACCAATCGTGAGCAACGTCTTCCCAATGGTTTCACCGGCTATACGACCA‑ACGCCTCGGTGAAACGCGCACCAGTCAAACAGACCGCGCTACGCGCCCGCCCAGGCAATGCCGCCAGCAGCCGCGGTGCGAATGTCGCCGCCATGTc                                       >  1:49217/1‑149 (MQ=255)                                                                                                            gCCACCAATCGTGAGCAACGTCTTCCAAATGGTTTCACCGTCTATACGACCA‑ACGAATCGGTGAAACGCGCACCAGTCAAACAGACAGCGCTACGAGACAGCCCAGTCAATGCCGCCAGAAGCCGCGGTGAGAATGAAGCCTCCATg                                         >  4:119907/1‑147 (MQ=255)                                                                                                               accaATCGTGAGCAACGTCTTCCCAATGGTTTCACCGGCTATACGACCA‑ACGCCTCGGTGAAACGCGCACCAGTCAAACAGACCGCGCTACGCGCCCGCCCAGGCAATGCCGCCAGCAGcc                                                                <  3:126997/121‑1 (MQ=255)                                                                                                               accaATCGTGAGCAACGTCTTCCCAATGGTTTCACCGGCTATACGACCA‑ACGCCTCGGTGAAACGCGCACCAGTCAAACAGACCGCGCTACGCGCCCGCCCAGGCAATGCCGCCAGCAGcc                                                                >  4:126997/1‑121 (MQ=255)                                                                                                                 caATCGTGAGCAACGTCTTCCCAATGGTTTCACCGGCTATACGACCA‑ACGCCTCGGTGAAACGCGCACCAGTCAAACAGACCGCGCTACGCGCCCGCCCAGGCAATGCCGCCAGCAGCCGCGGTGCGAATGTCGCCGCCATGTCGCCt                                   >  7:247890/1‑148 (MQ=255)                                                                                                                    tCGTGAGCAACGTCTTCCCAATGGTTTCACCGGCTATACGACCA‑ACGCCTCGGTGAAACGCGCACCAGTCAAACAGACCGCGCTACGCGCCCGCCCAGGCAATGCCGCCAGCAGCCGCGGTGCGAATGTCGCCGCCATGTCGCCTaag                                >  1:348099/1‑148 (MQ=255)                                                                                                                      gTGAGCAACGTCTTCCCAATGGTTTCACCGGCTATACGACCA‑ACGCCTCGGTGAAACGCGCACCAGTCAAACAGACCGCGCTACGCGCCCGCCCAGGCAATGCCGCCAGCAGCCGCGGTGCGAATGTCGCCGCCATGTCGCCTaagca                              >  8:75460/1‑148 (MQ=255)                                                                                                                       tGAGCAACGTCTTCCCAATGGTTTCACCGGCTATACGACCA‑ACGCCTCGGTGAAACGCGCACCAGTCAAACAGACCGCGCTACGCGCCCGCCCAGGCAATGCCGCCAGCAGCCGCGGTGCGAATGTCGCCGCCATGTCGCCTaagca                              >  1:202783/1‑147 (MQ=255)                                                                                                                       tGAGCAACGTCTTCCCAATGGTTTCACCGGCTATACGACCA‑ACGCCTCGGTGAAACGCGCACCAGTCAAACAGACCGCGCTACGCGCCCGCCCAGGCAATGCCGCCAGCAGCCGCGGTGCGAATGTCGCCGCCATGTCGCCTaagc                               <  3:9541/146‑1 (MQ=255)                                                                                                                       tGAGCAACGTCTTCCCAATGGTTTCACCGGCTATACGACCA‑ACGCCTCGGTGAAACGCGCACCAGTCAAACAGACCGCGCTACGCGCCCGCCCAGGCAATGCCGCCAGCAGCCGCGGTGCGAATGTCGCCGCCATGTCGCCTaagc                               >  4:9541/1‑146 (MQ=255)                                                                                                                               gTCTTCCCAATGGTTTCACCGGCTATACGACCA‑ACGCCTCGGTGAAACGCGCACCAGTCAAACAGACCGCGCTACGCGCCCGCCCAGGCAATGCCGCCAGCAGCCGCGGTGCGAATGTCGCCGCCATGTCGCCTAAGCAAAGCAGCGAt                    <  1:223610/149‑1 (MQ=255)                                                                                                                                  ttCCCAATGGTTTCACCGGCTATACGACCA‑ACGCCTCGGTGAAACGCGCACCAGTCAAACAGACCGCGCTACGCGCCCGCCCAGGCAATGCCGCCAGCAGCCGCGGTGCGAATGTCGCCGCCATGTCGCCTAAGCAAAGCAGCGAtgtg                 >  6:138689/1‑149 (MQ=255)                                                                                                                                    cccAATGGTTTCACCGGCTATACGACCA‑ACGCCTCGGTGAAACGCGCACCAGTCAAACAGACCGCGCTACGCGCCCGCCCAGGCAATGCCGCCAGCAGCCGCGGTGCGAATGTCGCCGCCATGTCGCCTAAGCAAAGCAGCGAtgtg                 <  2:202783/147‑1 (MQ=255)                                                                                                                                    cccAATGGTTTCACCGGCTATACGACCA‑ACGCCTCGGTGAAACGCGCACCAGTCAAACAGACCGCGCTACGCGCCCGCCCAGGCAATGCCGCCAGCAGCCGCGGTGCGAATGTCGCCGCCATGTCGCCTAAGCAAAGCAGCGATGTGCt               >  2:49347/1‑149 (MQ=255)                                                                                                                                    cccAATGGTTTCACCGGCTATACGACCA‑ACGCCTCGGTGAAACGCGCACCAGTCAAACAGACCGCGCTACGCGCCCGCCCAGGCAATGCCGCCAGCAGCCGCGGTGCGAATGTCGCCGCCATGTCGCCTAAGCAAAGCAGCGATGTGCt               >  2:43925/1‑149 (MQ=255)                                                                                                                                     ccAATGGTTTCACCGGCTATACGACCA‑ACGCCTCGGTGAAACGCGCACCAGTCAAACAGACCGCGCTACGCGCCCGCCCAGGCAATGCCGCCAGCAGCCGCGGTGCGAATGTCGCCGCCATGTCGCCTAAGCAAAGCAGCGATGTGCt               >  3:242456/1‑148 (MQ=255)                                                                                                                                      cAATGGTTTCACCGGCTATACGACCA‑ACGCCTcggtgaaaccattgggaagacgttgctcacgatttgtggcgtgggcggccaggggcaataataggcagagggtcagccatgtctt                                             >  7:326599‑M2/1‑32 (MQ=255)                                                                                                                                      cAATGGTTTCACCGGCTATACGACCA‑ACGCCTcggtgaaaccattgggaagacgttgctcacgatttgtggcgtgggcggccaggggcaataataggcagagggtcagccatgtctt                                             <  8:326599‑M2/117‑86 (MQ=255)                                                                                                                                       aaTGGTTTCACCGGCTATACGACCA‑ACGCCTcggtgaacccattgggaagacgttgctcacgattggtggcgtgggcggccaggggcaataataggcagagggtcagccatgtcttgatcaaaggcggcatagatgaagctcttatga             <  7:66896‑M2/148‑118 (MQ=255)                                                                                                                                       aaTGGTTTCACCGGCTATACGACCA‑ACGCCTCGGTGAAACGCGCACCAGTCAAACAGACCGCGCTACGCGCCCGCCCAGGCAATGCCGCCAGCAGCCGCGGTGCGAATGTCGCCGCCATGTCGCCTAAGCAAAGCAGCGa                     >  3:241753/1‑140 (MQ=255)                                                                                                                                       aaTGGTTTCACCGGCTATACGACCA‑ACGCCTCGGTGAAACGCGCACCAGTCAAACAGACCGCGCTACGCGCCCGCCCAGGCAATGCCGCCAGCAGCCGCGGTGCGAATGTCGCCGCCATGTCGCCTAAGCAAAGCAGCGATGTGCTGAg            >  7:299254/1‑149 (MQ=255)                                                                                                                                            tttCACCGGCTATACGACCA‑ACGCCTCGGTGAAACGCGCACCAGTCAAACAGACCGCGCTACGCGCCCGCCCAGGCAATGCCGCCAGCAGCCGCGGTGCGAATGTCGCCGCCATGTCGCCTAAGCAAAGCAGCGATGTGCTGAGCCGTg       <  1:5953/149‑1 (MQ=255)                                                                                                                                               taCCGGCTATACGACCA‑ACGCCTCGGTGAAACGCGCACCAGGCAAACAGACCGCGCTACGCGCCCGCCCAGGCAATGCCGCCAGCAGCCGCGGTGCGAATGTCGCCGCCATGGCGCCTAAGCAAAGCAGCGATGTGCTGAGCCGTGc      <  3:263079/146‑1 (MQ=255)                                                                                                                                                 ccGaggcgttggtcgaataccaggtgaaaccattgggaagacgttgctcacgattcgtcgcgtgggcggccaggggcaataataggcagaggggcagccatgtcttgatcaaaggcggcatagattaagctcttattaatagttatgtt   >  6:81002‑M1/1‑3 (MQ=255)                                                                                                                                                 ccGGCTATACGACCA‑ACGCCTCGGTGAAACGCGCACCAGTCAAACAGACCGCGCTACGCGCCCGCCCAGGCAATGCCGCCAGCAGCCGCGGTGCGAATGTCGCCGCCAAGTCGCCTAACCAAAGCAGCGATGTGCTGAGCCGTGCgag   >  4:263079/1‑146 (MQ=255)                                                                                                                                                  cGaggcgttggtcgtatagccggtgaaaccattgggaagacgttgctcacgattggtggcgtgggcggccaggggcaataataggcagagggtcagccatgtcttgatcaaaggcggcatagatgaagctctt                  >  6:188726‑M1/1‑2 (MQ=255)                                                                                                                                                  cGaggcgttggtcgtatagccggtgaaaccattgggaagacgttgctcacgattggtggcgtgggcggccaggggcaataataggcagagggtcagccatgtcttgatcaaaggcggcatagatgaagctctt                  <  5:188726‑M1/133‑132 (MQ=255)                                                                                                                                                  cGGCTATACGACCA‑ACGCCTCGGTGAAACGCGCACCAGTCAAACAGACCGCGCTACGCGCCCGCCCAGGCAATGCCGCCAGCAGCCGCGGTGCGAATGTCGCCGCCATGTCGCCTAAGCAAAGCAGCGATGTGCTGAGCCGTGCGGTa  >  8:95134/1‑148 (MQ=255)                                                                                                                                                   |                                                                                                                                                    TTATAAAGTTGCGCGCCAACACATAACTATTCATAAGAGCTTCATCTATGCCGCCTTTGATCAAGACATGGCTGACCCTCTGCCTATTATTGCCCCTGGCCGCCCACGCCACCAATCGTGAGCAACGTCTTCCCAATGGTTTCACCGGCTATACGACCA‑ACGCCTCGGTGAAACGCGCACCAGTCAAACAGACCGCGCTACGCGCCCGCCCAGGCAATGCCGCCAGCAGCCGCGGTGCGAATGTCGCCGCCATGTCGCCTAAGCAAAGCAGCGATGTGCTGAGCCGTGCGGTA  >  NC_002947/5816144‑5816436

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.