New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	561381 =	65 (1.100)	6 (0.110)	6/240	NT	9.7%	intergenic (+18/‑49)	rpmJ/PP_mr09	50S ribosomal protein L36/Alpha_RBS regulatory region
	?	NC_002947	561409 =	52 (0.960)					intergenic (+46/‑21)	rpmJ/PP_mr09	50S ribosomal protein L36/Alpha_RBS regulatory region

GGTGAAAAAGCTGTGCCGTAACTGCAAGATCATCCGTCGCGAAGGCGTCGTACGAGTGATCTGCAGCGCGGAACCGCGTCACAAACAGCGCCAAGGCTGAGTGTGATCTGCGCTTCAAACCCAGCAGCTAGTGTGC‑‑TGCTGGGTTGATTATTCGTTTCTACAGC‑GATATTATCTCGCGCCCTATTTCTTGGCTTCCGGGGCGTAGGTAGCTGTCAATTGGAGTCCCACTGAATGGCCCGTATTGCAGGCGTCAACATTCCAGATAACAAGCATACTGTTATCT  >  NC_002947/561264‑561546                                                                                                                                                    |                                                                                                                                           ggTGAAAAAGCTGTGCCGTAACTGCAAGATCATCCGTCGCGAAGGCGTCGTACGAGTGATCTGCAGCGCGGAACCGCGTCACAAACAGCGCCAAGGCTGAGTGTGATCTGCGCTTCAAACCCAGCAGCTAGTGTGC‑‑TGCTGGGTTGat                                                                                                                                          <  7:8469/148‑1 (MQ=255)  gTGAAAAAGCTGTGCCGTAACTGCAAGATCATCCGTCGCGAAGGCGTCGTACGAGTGATCTGCAGCGCGGAACCGCGTCACAAACAGCGCCAAGGCTGAGTGTGATCTGCGCTTCAAACCCAGCAGCTAGTGTGC‑‑TGCTGGGTTGa                                                                                                                                           >  2:245108/1‑146 (MQ=255)  gTGAAAAAGCTGTGCCGTAACTGCAAGATCATCCGTCGCGAAGGCGTCGTACGAGTGATCTGCAGCGCGGAACCGCGTCACAAACAGCGCCAAGGCTGAGTGTGATCTGCGCTTCAAACCCAGCAGCTAGTGTGC‑‑TGCTGGGTTGa                                                                                                                                           <  1:245108/146‑1 (MQ=255)             gtgCCGTAACTGCAAGATCATCCGTCGCGAAGGCGTCGTACGAGTGATCTGCAGCGCGGAACCGCGTCACAAACAGCGCCAAGGCTGAGTGTGATCTGCGCTTCAAACCCAGCAGCTAGTGTGC‑‑TGCTGGGTTGATTATTCGTTTCTa                                                                                                                              >  3:311631/1‑148 (MQ=255)              gcgggTAACTGCAAGATCATCCGTCGCGAAGGCGTCGTACGAGTGATCTGCAGCGCGGAACCGCGTCACAAACAGCGCCAAGGCTGAGTGTGATCTGCGCTTCAAACCCAGCAGCTAGTGTGC‑‑TGCTGGGTTGATTATTCGTTTCTACa                                                                                                                            <  6:151256/145‑1 (MQ=255)                  gTACCTCCAAGATCATCCGGCGCGCAGCCGTCGTACGAGTCTTCTGCAGCGCGGAACCGCGTCACAAACAGCGCAACGGCTGAGTGTGATCTGCTCTTCAAACCCAGCAGCTAGTGTGC‑‑TGCTGGGTTGATTATTCGTTTCTACAGC‑Ga                                                                                                                       <  4:278044/149‑1 (MQ=255)                  ctgcaatacgggccattcagtgggactccaattgacagctacctacgccccggaagccaagaaatagggcgcgagataatatcgctgtagaaacgaataatcaacccagctgctagtgtgctgctgggttGATTATTCGttt                                                                                                                                 <  8:128339‑M2/12‑1 (MQ=255)                  ctgcaatacgggccattcagtgggactccaattgacagctacctacgccccggaagccaagaaatagggcgcgagataatatcgctgtagaaacgaataatcaacccagcagctagtgtgctgctgggttGATTATTCGttt                                                                                                                                 >  7:128339‑M2/131‑142 (MQ=255)                      cTGCAAGATCATCCGTCGCGAAGGTGTCGTACGAGTGATCTGCAGCGCGGAACCGCGTCACAAACAGCGCCAAGGCTGAGTGTGATCTGCGCTTCAAACCCAGCAGCTAGTGTGC‑‑TGCTGGGTTGATTATTCGTTTCTACAGC‑Gatat                                                                                                                    >  1:202540/1‑148 (MQ=255)                       tGCAAGATCATCCGTCGCGAAGGCGACGTACGAGTGATCTGCAGCCCGGAACCGCGTCACAAACAGCGCCAAGGCTCAGTGTGATCTGCGCTTCAAACCCAGCAGCTACTGTGC‑‑TGCTGGGTTGATTATTCGTTTATACAGC‑Gataata                                                                                                                  >  8:303995/1‑149 (MQ=255)                         ctaGATCATCCGTCGCGAAGTCGTCGTTCGAGTGATCTGCAGCGCGGAACCGCGTCACAAACAGCGCCATTGCTGAGTGTTATCTGCGCTTCAAACCCAGCAGCTAGTGTGC‑‑TGCTGGGTTGATTATTCGTTTCTACAGC‑GATATTAtc                                                                                                                <  7:303995/147‑1 (MQ=255)                         ccagctcatcCGTCGCGCAGGCGTCGCTCGCGTCCGCTGCAGCCCGGACCCGCGTCACAACCAGCGCCACCGCTGAGTGTGACCTCCGCTTCAAACCCAGCAGCTCGTCTGC‑‑TGCTGGGTTGATTATTCGTTTCTACAGC‑GATATTAtc                                                                                                                <  4:278130/144‑1 (MQ=255)                         cAAGATCATCCGTCGCGAAGGCGTCGTACGAGTGATCTGCAGCGCGGAACCGCGTCACAAACAGCGCCAAGGCTGAGTGTGATCTGCGCTTCAAACCCAGCAGCTAGTGTGC‑‑TGCTGGGTTGATTATTCGTTTCTACAGC‑GATATTAtc                                                                                                                >  7:293298/1‑149 (MQ=255)                           aGATCATCCGTCGCGAAGGCGTCGTACGAGTGATCTGCAGCGCGGAACCGCGTCACAAACAGCGCCAAGGCTGAGTGTGATCTGCGCTTCAAACCCAGCAGCTAGTGTGC‑‑TGCTGGGTTGATTATTCGTTTCTACAGC‑GATATTAtctc                                                                                                              <  8:309993/149‑1 (MQ=255)                              tcatcCGTCGCGAAGGCGTCGTACGAGTGATCTGCAGCGCGGAACCGCGTCACAAACAGCGCCAAGGCTGAGTGTGATCTGCGCTTCAAACCCAGCAGCTAGTGTGC‑‑TGCTGGGTTGATTATTCGTTTCTACAGC‑GATATTATCTcgcg                                                                                                           >  4:342364/1‑149 (MQ=255)                                atcCTTCGCGAAGGCGTCGTACGAGTGATCTGCAGGGCGGAACCGCGTCACAAACAGCGCCAAGGCTGAGTGTGATCTGCGCTTCAAACCCAGCAGCTAGTGTGC‑‑TGCTGGGTTGATTATTCGTTTCTACAGC‑GATATTATCTCGCGcc                                                                                                         <  3:96747/149‑1 (MQ=255)                                atcCGTCGCGAAGGTGTCGTACGAGTGATCTGCAGCGCGGAACCGCGTCACAAACAGCGCCAAGGCTGAGTGTGATCTGCGCTTCAAACCCAGCAGCTAGTGTGC‑‑TGCTGGGTTGATTATTCGTTTCTACAGC‑GATATTATCTCGCGcc                                                                                                         <  2:202540/149‑1 (MQ=255)                                atcCGTCGCGAAGGCGTCGTACGAGTGATCTGCAGCGCGGAACCGCGTCACAAACAGCGCCAAGGCTGAGTGTGATCTGCGCTTCAAACCCAGCAGCTAGTGTGC‑‑TGCTGGGTTGATTATTCGTTTCTACAGC‑GATATTATCTCGCGcc                                                                                                         <  4:311631/149‑1 (MQ=255)                                 tcCGTCGCGAAGGCGTCGTACGAGTGATCTGCAGCGCGGAACCGCGTAACAAACAGCGCCAAGGCTGAGTGTGATCTGCGCTTCAAACCCAGCAGCTAGTGTGC‑‑TGCTGGGTTGATTATTCGTTTCTACAGC‑GATATTATCTCGCGccc                                                                                                        >  1:83055/1‑149 (MQ=255)                                    gTCGCGAAGGCGTCGTACGAGTGATCTGCAGCGCGGAACCGCGTCACAAACAGCGCCAAGGCTGAGTGTGATCTGCGCTTCAAACCCAGCAGCTAGTGTGC‑‑TGCTGGGTTGATTATTCGTTTCTACAGC‑GATATTATCTCGCGCCCTAt                                                                                                     >  4:231730/1‑149 (MQ=255)                                        cgAAGGCGTCGTACGAGTGATCTGCAGCGCGGAACCGCGTCACAAACAGCGCCAAGGCTGAGTGTGATCTGCGCTTCAAACCCAGCAGCTAGTGTGC‑‑TGCTGGGTTGATTATTCGTTTCTACAGC‑GATATTATCTCGCGCCCTATTTCt                                                                                                 >  4:8919/1‑149 (MQ=255)                                              caattgacagctacctacgccccggaagccaagaaatagggcgcgagataatatcgctgtagaaacgaataatcaacccagcagctagtgtgctgctgggttGATTATTCGTTTCTACAGC‑GATATTATCTCGCGCCCTATTTCTTg                                                                                               <  2:18798‑M2/45‑1 (MQ=255)                                               gtcgtACGAGTGATCTGCAGCGCGGAACCTCGTCACAAACAGCGCCAAGGCTGAGTGTGATCTGCGCTTCAAACCCAGCAGCTAGTGTGC‑‑TGCTGGGTTGATTATTCGtt                                                                                                                                  <  4:146224/110‑1 (MQ=255)                                               gtcgtACGAGTGATCTGCAGCGCGGAACCGCGTCACAAACAGCGCCAAGGCTGAGTGTGATCTGCGCTTCAAACCCAGCAGCTAGTGTGC‑‑TGCTGGGTTGATTATTCGtt                                                                                                                                  >  3:146224/1‑110 (MQ=255)                                                  gtACGAGTGATCTGCAGCGCGGAACCGCTTCACAAACAGCGCCAAGGCTGAGTTTGATCTGCGCTTCAAACCCAGCAGCTAGTGTGC‑‑TGCTGGGTTGATTATTCGTTTCTACAGC‑GATATTATCTCGCGCCCTATTTCTTGGCTTCCgg                                                                                       <  8:108550/149‑1 (MQ=255)                                                   tACGAGTGATCTGCAGCGCGGAACCGCGTCACAAACAGCGCCAAGGCTGAGTGTGATCTGCGCTTCAAACCCAGCAGCTAGTGTGC‑‑TGCTGGGTTGATTATTCGTTTCTACAGC‑GATATTATCTCGCGCCCTATTTCTTGGCTTCCggg                                                                                      <  3:8919/149‑1 (MQ=255)                                                     cGAGTGATCTGCAGCGCGGAACCGCGTCACAAACAGCGCCAAGGCTGAGTGTGATCTGCGCTTCAAACCCAGCAGCTAGTGTGC‑‑TGCTGGGTTGATTATTCGTTTCTACAGC‑GATATTATCTCGCGCCCTATTTCTTGGCTTCCgggg                                                                                     <  3:231730/148‑1 (MQ=255)                                                     cGAGTGATCTGCAGCGCGGAACCGCGTCACAAACAGCGCCAAGGCTGAGTGTGATCTGCGCTTCAAACCCAGCAGCTAGTGTGC‑‑TGCTGGGTTGATTATTCGTTTCTACAGC‑GATATTATCTCGCGCCCTATTTCTTGGCTTCCGGGGc                                                                                    <  3:342364/149‑1 (MQ=255)                                                         tGATCTGCAGCGCGGAACCGCGTCACAAACAGCGCCAAGGCTGAGTGTGATCTGCGCTTCAAACCCAGCAGCTAGTGTGC‑‑TGCTGGGTTGATTATTCGTTTCTACAGC‑GATATTATCTCGCGCCCTATTTCTTGGCTTCCGGGGCgtag                                                                                >  3:131831/1‑149 (MQ=255)                                                           aTCTGCAGCGCGGAACCGCGTCACAAACAGCGCCAAGGCTGAGTGTGATCTGCGCTTCAAACCCAGCAGCTAGTGTGC‑‑TGCTGGGTTGATTATTCGTTTCTACAGC‑GATATTATCTCGCGCCCTATTTCTTGGCTTCCGGGGCgtagg                                                                               >  2:103797/1‑148 (MQ=255)                                                               gCAGCGCGGAACCGCGTCACAAACAGCGCCAAGGCTGAGTGTGATCTGCGCTTCAAACCCAGCAGCTAGTGTGC‑‑TGCTGGGTTGATTATTCGTTTCTACAGC‑GATATTATCTCGCGCCCTATTTCTTGGCTTCCGGGGCGTAGGTAGCt                                                                          >  6:146048/1‑149 (MQ=255)                                                                cAGCGCGGAACCGCGTCACAAACAGCGCCAAGGCTGAGTGTGATCTGCGCTTCAAACCCAGCAGCTAGTGTGC‑‑TGCTGGGTTGATTATTCGTTTCTACAGC‑GATATTATCTCGCGCCCTATTTCTTGGCTTCCGGGGCgtaggt                                                                              <  6:48824/144‑1 (MQ=255)                                                                cAGCGCGGAACCGCGTCACAAACAGCGCCAAGGCTGAGTGTGATCTGCGCTTCAAACCCAGCAGCTAGTGTGC‑‑TGCTGGGTTGATTATTCGTTTCTACAGC‑GATATTATCTCGCGCCCTATTTCTTGGCTTCCGGGGCGTAGGTAGCt                                                                          <  3:111935/148‑1 (MQ=255)                                                                cAGCGCGGAACCGCGTCACAAACAGCGCCAAGGCTGAGTGTGATCTGCGCTTCAAACCCAGCAGCTAGTGTGC‑‑TGCTGGGTTGATTATTCGTTTCTACAGC‑GATATTATCTCGCGCCCTATTTCTTGGCTTCCGGGGCGTAGGTAGCt                                                                          <  4:350999/148‑1 (MQ=255)                                                                  gcgcGGAACCGCGTCACAAACAGCGCCAAGGCTGAGTGTGATCTGCGCTTCAAACCCAGCAGCTAGTGTGC‑‑TGCTGGGTTGATTATTCGTTTCTACAGC‑GATATTATCTCGCGCCCTATTTCTTGGCTTCCGGGGCGTAGGTAGCTGt                                                                        >  7:30987/1‑148 (MQ=255)                                                                        aaCCGCGTCACAAACAGCGCCAAGGCTGAGTGTGATCTGCGCTTCAAACCCAGCAGCTAGTGTGCAAGGCTGGGTTGATTATTCGTTTCTACAGC‑GATATTATCTCGCGCCCTATTTCTTGGCTTCCGGGGCGTAGGTAGCTGTCAAtt                                                                   >  1:110195/1‑149 (MQ=255)                                                                        aaCCGCGTCACAAACAGCGCCAAGGCTGAGTGTGATCTGCGCTTCAAACCCAGCAGCTAGTGTGC‑‑TGCTGGGTTGATTATTCGTTTCTACAGC‑GATATTATCTCGCGCCCTATTTCTTGGCTTCCGGGGCGTAGGTAGCTGTCAATTgg                                                                 <  2:253420/149‑1 (MQ=255)                                                                         caagaaatagggcgcgagataatatcgctgtagaaacgaataatcAACCCAGCAGCACACTAGC‑‑TGCTGGGTTGATTATTCGTTTCTACAGC‑GATATTATCTCGCGCCCTATTTCTTGGCTTCCGGGGCGTAGGTAGCTGTCAATTg                                                                  <  2:18798‑M1/102‑1 (MQ=255)                                                                         aCCGCGTCACAAACAGCGCCAAGGCTGAGTGTGATCTGCGCTTCAAACCCAGCAGCTAGTGTGC‑‑TGCTGGGTTGATTATTCGTTTCTACAGC‑GATATTATCTCGCGCCCTATTTCTTg                                                                                               >  7:188700/1‑118 (MQ=255)                                                                         aCCGCGTCACAAACAGCGCCAAGGCTGAGTGTGATCTGCGCTTCAAACCCAGCAGCTAGTGTGC‑‑TGCTGGGTTGATTATTCGTTTCTACAGC‑GATATTATCTCGCGCCCTATTTCTTg                                                                                               <  8:188700/118‑1 (MQ=255)                                                                         aCCGCGTCACAAACAGCGCCAAGGCTGAGTGTGATCTGCGCTTCAAACCCAGCAGCTAGTGTGC‑‑TGCTGGGTTGATTATTCGTTTCTACAGC‑GATATTATCTCGCGCCCTATTTCTTGGCTTCCGGGGCGTAGGTAGCTGTCAATTGGa                                                                <  2:83055/149‑1 (MQ=255)                                                                                 acaAACAGCGCCAAGGCTGAGTGTGATCTGCGCTTCAAACCCAGCAGCTAGTGTGC‑‑TGCTGGGTTGATTATTCGTTTCTACAGC‑GATATTATCTCGCGCCCTATTTCTTGGCTTCCGGGGCGTAGGTAGCTGTCAATTGGAGTCCCACt                                                        >  7:128048/1‑149 (MQ=255)                                                                                 acaAACAGCGCCAAGGCTGAGTGTGATCTGCGCTTCAAACCCAGCAGCTAGTGTGC‑‑TGCTGGGTTGATTATTCGTTTCTACAGC‑GATATTATCTCGCGCCCTATTTCTTGGCTTCCGGGGCGTAGGTAGCTGTCAATTGGAGTCCCACt                                                        >  7:164525/1‑149 (MQ=255)                                                                                  caAACAGCGCCAAGGCTGAGTGTGATCTGCGCTTCAAACCCAGCAGCTAGTGTGC‑‑TGCTGGGTTGATTATTCGTTTCTACAGC‑GATATTATCTCGCGCCCTATTTCTTGGCTTCCGGGGCGTAGGTAGCTGTCAATTGGAGTCCCACt                                                        >  1:344674/1‑148 (MQ=255)                                                                                  caAACAGCGCCAAGGCTGAGTGTGATCTGCGCTTCAAACCCAGCAGCTAGTGTGC‑‑TGCTGGGTTGATTATTCGTTTCTACAGC‑GATATTATCTCGCGCCCTATTTCTTGGCTTCCGGGGCGTAGGTAGCGGTCAATTGGAGTCCCACt                                                        >  5:243744/1‑148 (MQ=255)                                                                                     aCAGCGCCAAGGCTGAGTGTGATCTGCGCTTCAAACCCAGCAGCTAGTGTGC‑‑TGCTGGGTTGATTATTCGTTTCTACAGC‑GAtatt                                                                                                                   >  3:112437/1‑86 (MQ=255)                                                                                     aCAGCGCCAAGGCTGAGTGTGATCTGCGCTTCAAACCCAGCAGCTAGTGTGC‑‑TGCTGGGTTGATTATTCGTTTCTACAGC‑GAtatt                                                                                                                   <  4:112437/86‑1 (MQ=255)                                                                                     aCAGCGCCAAGGCTGAGTGTGATCTGCGCTTCAAACCCAGCAGCTAGTGTGC‑‑TGCTGGGTTGATTATTCGTTTCTACAGC‑GATATTATCTCGCGCCCTATGTCTTGGCTTCCGGGGCGTAGGTAGCTGTCAATTGGAGTCCCACTGact                                                    >  2:258648/1‑147 (MQ=255)                                                                                         cgcCAAGGCTGAGTGTGATCTGCGCTTCAAACCCAGCAGCTAGTGTGC‑‑TGCTGGGTTGATTATTCGTTTCTACAGC‑GATATTATCTCGCGCCCTATTTCTTGGCTTCCGGGGCGTAGGTAGCTGTCAATTGGAGTCCCACTGAATGGcc                                                <  3:314088/149‑1 (MQ=255)                                                                                          gcCAAGGCTGAGTGTGATCTGCGCTTCAAACCCAGCAGCTAGTGTGC‑‑TGCTGGGTTGATTATTCGTTTCTACAGC‑GATATTATCTCGCGCCCTATTTCTTGGCTTCCGGGGCGTAGGTAGCTGTCAATTGGa                                                                >  5:50941/1‑132 (MQ=255)                                                                                          gcCAAGGCTGAGTGTGATCTGCGCTTCAAACCCAGCAGCTAGTGTGC‑‑TGCTGGGTTGATTATTCGTTTCTACAGC‑GATATTATCTCGCGCCCTATTTCTTGGCTTCCGGGGCGTAGGTAGCTGTCAATTGGa                                                                <  6:50941/132‑1 (MQ=255)                                                                                           ccAAGGCTGAGTGTGATCTGCGCTTCAAACCCAGCAGCTAGTGTGC‑‑TGCTGGGTTGATTATTCGTTTCTACAGC‑GATATTATCTCGCGCCCTATTTCTTGGCTTCCGGGGCGTAGGTAGCTGTCAATTGGAGTCCCACTGAATGGCCCg                                              >  1:150757/1‑149 (MQ=255)                                                                                                 cTGAGTGTGATCTGCGCTTCAAACCCAGCAGCTAGTGTGC‑‑TGCTGGGTTGATTATTCGTTTCTACAGC‑GATATTATCTCGCGCCCTATTTCTTGGCTTCCGGGGCGTAGGTAGCTGTCAATTGGAGTCCCACTGAATGGCCCGTATTGc                                        <  8:30987/149‑1 (MQ=255)                                                                                                         gATCTGCGCTTCAAACCCAGCAGCTAGTGTGC‑‑TGCTGGGTTGATTATTCGTTTCTACAGC‑GATATTATCTCGCGCCCTATTTCTTGGCTTCCGGGGCGTAGGTAGCTGTCAATTGGAGTCCCACTGAATGGCCCGTATTGCAGGCGTc                                 >  2:10301/1‑148 (MQ=255)                                                                                                          aaacgaataatcAACCCAGCAGCACACTAGC‑‑TGCTGGGTTGATTATTCGTTTCTACAGC‑GATATTATCTCGCGCCCTATTTCTTGGCTTCCGGGGCGTAGGTAGCTGTCAATTGGAGTCCCACTGAATGGCCCGTATTGCAg                                      >  7:128339‑M1/13‑142 (MQ=255)                                                                                                          aaacgaataatcAACCCAGCAGCACACTAGC‑‑AGCTGGGTTGATTATTCGTTTCTACAGC‑GATATTATCTCGCGCCCTATTTCTTGGCTTCCGGGGCGTAGGTAGCTGTCAATTGGAGTCCCACTGAATGGCCCGTATTGCAg                                      <  8:128339‑M1/130‑1 (MQ=255)                                                                                                              gcgcTTCAAACCCAGCAGCTAGTGTGC‑‑TGCTGGGTTGATTATTCGTTTCTACAGC‑GATATTATCTCGCGCCCTATTTCTTGGc                                                                                             >  2:127312/1‑83 (MQ=255)                                                                                                              gcgcTTCAAACCCAGCAGCTAGTGTGC‑‑TGCTGGGTTGATTATTCGTTTCTACAGC‑GATATTATCTCGCGCCCTATTTCTTGGc                                                                                             <  1:127312/83‑1 (MQ=255)                                                                                                               cgcTTCAAACCCAGCAGCTAGTGTGC‑‑TGCTGGGTTGATTATTCGTTTCTACAGC‑GATATTATCTCGCGCCCTATTTCTTGGCTTCCGGGGCGTAGGTAGCTGTCAATTGGAGTCCCACTGAATGGCCCGTATTGCAGGCGTCAAc                              <  1:103797/145‑1 (MQ=255)                                                                                                               cgcTTCAAACCCAGCAGCTAGTGTGC‑‑TGCTGGGTTGATTATTCGTTTCTACAGC‑GATATTATCTCGCGCCCTATTTCTTGGCTTCCGGGGCGTAGGTAGCTGTCAATTGGAGTCCCACTGAATGGCCCGTATTGCAGGCGTCAACATTc                          >  4:235135/1‑149 (MQ=255)                                                                                                                 cTTCAAACCCAGCAGCTAGTGTGC‑‑TGCTGGGTTGATTATTCGTTTCTACAGCGGATATTATCTCGCGCCCTATTTCTTGGCTTCCGGGGCGTAGGTAGCTGTCAATTGGAGTCCCACTGAATGGCCCGTATTGCAGGCGTCAACATTc                          >  1:96616/1‑148 (MQ=255)                                                                                                                      AACCCAGCAGCTAGTGTGC‑‑TGCTGGGTTGATTATTCGTTTCTACAGC‑GATATTATCTCGCGCCCTATTTCTTGGCTTCCGGGGCGTAGGTAGCTGTCAATTGGAGTCCCACTGAATGGCCCGTATTGCAGGCGTCAACATTCCAGATaa                   >  2:344674‑M1/1‑149 (MQ=255)                                                                                                                       ACCCAGCAGCTAGTGTGC‑‑TGCTGGGTTGATTATTCGTTTCTACAGC‑GATATTATCTCGCGCCCTATTTCTTGGCTTCCGGGGCGTAGGTAGCTGTCAATTGGAGTCCAACTGAATGGCCCGTATTGCAGGCGTCAACATTCCAGATaa                   <  7:44862‑M1/148‑1 (MQ=255)                                                                                                                        aacccagcagcacactagctgctgggttGATTATTCGTTTCTACAGC‑GATATTATCTCGCGCCCTATTTCTTGGCTTCCGGGGCGTAGGTAGCTGTCAATTGGAGTCCCACTGAATGGCCCGTATTGCAGGCGTCAACATTCCAGATaa                   >  4:55775‑M2/29‑149 (MQ=255)                                                                                                                           ccagcagcacactagctgctgggttGATTATTCGTTTCTACAGC‑GATATTATCTCGCGCCCTATTTCTTGGCTTCCGGGGCGTAGGTAGCTGTCAATTGGAGTCCCACTGAATGGCCCGTATTGCAGGCGTCAACATTCCAGATAAc                  >  2:108715‑M2/26‑147 (MQ=255)                                                                                                                           ccagcagcacactagctgctgggttGATTATTCGTTTCTACAGC‑GATATTATCTCGCGCCCTATTTCTTGGCTTCCGGGGCGTAGGTAGCTGTCAATTGGAGTCCCACTGAATGGCCCGTATTGCAGGCGTCAACATTCCAGATAACaa                <  1:18798‑M2/124‑1 (MQ=255)                                                                                                                                    tttgc‑‑tgcTGGGTTGATTATTCGTTTCTACAGC‑GATATTATCTCGCGCCCTATTTCTTGGCTTCCGGGGCGTAGGTAGCTGTCAATTGGAGTCCCACTGAATGGCCCGTATTGCAGGCGTCAACATTCCAGATAACAAGCATACTGTTa     <  7:169417/147‑1 (MQ=255)                                                                                                                                    tgtgC‑‑TGCTGGGTTGATTATTCGTTTCTACAGC‑GATATTATCTCGCGCCCTATTTCTTGGCTTCCGGGGCGTAGGTAGCTGTCAATTGGAGTCCCACTGAATGGCCCGTATTGCAGGCGTCAACATTCCAGATAACAAGCATACTGTTa     >  8:104260/1‑149 (MQ=255)                                                                                                                                    tgtgC‑‑TGCTGGGTTGATTATTCGTTTCTACAGC‑GATATTATCTCGCGCCCTATTTCTTGGCTTCCGGGGCGTAGGTAGCTGTCAATTGGAGTCCCACTGAATGGCCCGTATTGCAGGCGTCAACATTCCAGATAACAAGCATACTGTTa     <  2:150757/149‑1 (MQ=255)                                                                                                                                         gctgctgggttGATTATTCGTTTCTACAGC‑GATATTATCTCGCGCCCTATTTCTTGGCTTCCGGGGCGTAGGTAGCTGTCAATTGGAGTCCCACTGAATGGCCCGTATTGCAGGCGTCAACATTCCAGATAACAAGCATACTGTTAtct  >  2:232530‑M2/12‑149 (MQ=255)                                                                                                                                                    |                                                                                                                                           GGTGAAAAAGCTGTGCCGTAACTGCAAGATCATCCGTCGCGAAGGCGTCGTACGAGTGATCTGCAGCGCGGAACCGCGTCACAAACAGCGCCAAGGCTGAGTGTGATCTGCGCTTCAAACCCAGCAGCTAGTGTGC‑‑TGCTGGGTTGATTATTCGTTTCTACAGC‑GATATTATCTCGCGCCCTATTTCTTGGCTTCCGGGGCGTAGGTAGCTGTCAATTGGAGTCCCACTGAATGGCCCGTATTGCAGGCGTCAACATTCCAGATAACAAGCATACTGTTATCT  >  NC_002947/561264‑561546

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.