New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	2465533 =	46 (0.780)	5 (0.090)	5/246	NT	9.7%	coding (105/1353 nt)	PP_2157	sensor histidine kinase
	?	NC_002947	2465573 =	50 (0.900)					coding (65/1353 nt)	PP_2157	sensor histidine kinase

CGGCAGGCGGGCCTGGAGCTCATCAGCCGTGCTGACGCCAGCCAGTTGCGTCCGAAACAATGACAGGCGCGAGTCCAGCAGTTGTTGGTCGAGTTCGACGAAGTGCTGCTCGCTGGCCCGGCTGAACAGCAGACCGGCGCCCAGCGAGACGGTGGCGGTGCAGGCGGCGAACAGCAGG‑GCCAGGCGGCTGCCGAGGGAAACCCGGCGCATCACTCGGTGCGCTCTTCGAGTACGTAACCCATGCCGCGGACGGTGTGGATCAGCTTGTTGGGGTGCGGGTCGTCGATTTTCAGGCGC  >  NC_002947/2465425‑2465721                                                                                                                                                     |                                                                                                                                                      acaccgtccgcggcatgggttacgtactcgaagagcgcaccgagtgatgcgccgggtttccctcggcagccgcctggccctgctgttcgccgcctgcaccgccaccgtCTCGCTGGCCCGGCTGAACAGCAGACCGGCGCCCAGCgaga                                                                                                                                                       >  3:301698‑M1/109‑149 (MQ=255)   gCAGGCGGGCCTGGAGCTCATCAGCCGTGCTGACGCCAGCCAGTTGCGTCCGAAACAATGACAGGCGCGAGTCCAGCAGTTGTTGGTCGAGTTCGACGAAGTGCTGCTCGCTGGCCCGGCTGAACAGCAGACCGGCGCCCAGCGAGACg                                                                                                                                                     <  7:298223/149‑1 (MQ=255)      ggCGGGCCTGGAGCTCATCAGCCGTGCTGACGCCAGCCAGTTGCGTCCGAAACAATGACAGGCGCGAGTCCAGCAGTTGTTGGTCGAGTTCGACGAAGTGCTGCTCGCTGGCCCGGCTGAACAGCAGACCGGCGCCCAGCGAGACGGTg                                                                                                                                                  <  2:30300/149‑1 (MQ=255)                gAGCTCATCAGCCGTGCTGACGCCAGCCAGTTGCGTCCGAAACAATGACAGGCGCGAGTCCAGCAGTTGTTGGTCGAGTTCGACGAAGTGCTGCTCGCTGGCCCGGCTGAACAGCAGACCGGCGCCCAGCGAGACGGTGGCGGTGCa                                                                                                                                          <  7:169475/147‑1 (MQ=255)                gAGCTCATCAGCCGTGCTGACGCCAGCCAGTTGCGTCCGAAACAATGACAGGCGCGAGTCCAGCAGTTGTTGGTCGAGTTCGACGAAGTGCTGCTCGCTGGCCCGGCTGAACAGCAGACCGGCGCCCAGCGAGACGGTGGCGGTGCAgg                                                                                                                                        <  7:156663/149‑1 (MQ=255)                      atcaGCCGTGCTGACGCCAGCCAGTTGCGTCCGAAACAATGACAGGCGCGAGTCCAGCAGTTGTTGGTCGAGTTCGACGAAGTGCTGCTCGCTGGCCCGGCTGAACAGCAGACCGGCGCCCAGCGAGACGGTGGCgg                                                                                                                                              <  1:97387/137‑1 (MQ=255)                      atcaGCCGTGCTGACGCCAGCCAGTTGCGTCCGAAACAATGACAGGCGCGAGTCCAGCAGTTGTTGGTCGAGTTCGACGAAGTGCTGCTCGCTGGCCCGGCTGAACAGCAGACCGGCGCCCAGCGAGACGGTGGCgg                                                                                                                                              >  2:97387/1‑137 (MQ=255)                      atcaGCCGTGCTGACGCCAGCCAGTTGCGTCCGAAACAATGACAGGCGCGAGTCCAGCAGTTGTTGGTCGAGTTCGACGAAGTGCTGCTCGCTGGCCCGGCTGAACAGCAGACCGGCGCCCAGCGAGACGGTGGCGGTGCAGgcggcg                                                                                                                                   >  1:195213/1‑148 (MQ=255)                      atcaGCCGTGCTGACGCCAGCCAGTTGCGTCCGAAACAATGACAGGCGCGAGTCCAGCAGGTGTTGGTCGAGTTCGACGAAGTGCTGCTCGCTGGCCCGGCTGAACAGCAGACCGGCGCCCAGCGAGACGGTGGCGGTGCAGgcggcg                                                                                                                                   >  6:122377/1‑148 (MQ=255)                           ccGTGCTGACGCCAGCCAGTTGCGTCAGAAACAATGACAGGCGCGAGTCCAGCAGTTGTTGGTCGAGTTCGACGAAGTGCTGCTCGCTGGCCAGGCTGAACAGCAGACAGTCGCCCAGCGAGACGGTGGCGGTGCAGGCGGCGagccgc                                                                                                                             >  8:324830/1‑144 (MQ=255)                              tGCTGACGCCAGCCAGTTGCGTCCGAAACAATGACAGGCGCGAGTCCAGCAGTTGTTGGTCGAGTTCGACGAAGTGCTGCTCGCTGGCCCGGCTGAACAGCAGACCGGCGCCCAGCGAGACGGTGGCGGTGCAGGCGGCGAACAGCAgg                                                                                                                          <  6:378480/149‑1 (MQ=255)                                cTGACGCCAGCCAGTTGCGTCCGAAACAATGACAGGCGCGAGTCCAGCAGTTGTTGGTCGAGTTCGACGAAGTGCTGCTCGCTGGCCCGGCTGAACAGCAGACCGGCGCCCAGCGAGACGGTGGCGGTGCAGGCGGCGAACAGCAgg‑g                                                                                                                        <  2:50449/148‑1 (MQ=255)                                cTGACGCCAGCCAGTTGCGTCCGAAACAATGACAGGCGCGAGTCCAGCAGTTGTTGGTCGAGTTCGACGAAGTGCTGCTCGCTGGCCCGGCTGAACAGCAGACCGGCGCCCAGCGAGACGGTGGCGGTGCAGGCGGCGAACAGCAGG‑Gc                                                                                                                       >  1:146710/1‑149 (MQ=255)                                    cGCCAGCCAGTTGCGTCCGAAACAATGACAGGCGCGAGTCCAGCAGTTGTTGGTCGAGTTCGACGAAGTGCTGCTCGCTGGCCCGGCTGAACAGCAGACCGGCGCCCAGCGAGACGGTGGCGGTGCAGGCGGCGAACAGCAGG‑GCCAg                                                                                                                    <  8:92164/148‑1 (MQ=255)                                     gccagccaGTTGCGTCCGAAACAATGACAGGCGCGAGTCCAGCAGTTGTTGGTCGAGTTCGACGAAGTGCTGCTCGCTGGCCCGGCTGAACAGCAGACCGGCGCCCAGCGAGACGGTGGCGGTGCAGGCGGCGAACAGCAGG‑GCCAggc                                                                                                                  >  7:89900/1‑149 (MQ=255)                                            agTTGCGTCCGAAACAATGACAGGCGCGAGTCCAGCAGTTGTTGGTCGAGTTCGACGAAGTGCTGCTCGCTGGCCCGGCTGAACAGCAGACCGGCGCCCAGCGAGACGGTGGCGGTGCAGGCGGCGAACAGCAGG‑GCCAGGCGGCTGcc                                                                                                           >  5:139189/1‑149 (MQ=255)                                              ttGCGTCCGAAACAATGACAGGCGCGAGTCCAGCAGTTGTTGGTCGAGTTCGACGAAGTGCTGCTCGCTGGCCCGGCTGAACAGCAGACCGGCGCCCAGCGAGACGGTGGCGGTGCAGGCGGCGAACAGCAGG‑GCCAGGCGGCTGCCGa                                                                                                         <  2:255108/149‑1 (MQ=255)                                                      gAAACAATGACAGGCGCGAGTCCAGCAGTTGTTGGTCGAGTTCGCCGAAGTGCTGCTCGCTGGCCCGGCTGAACAGCAGACCGGCGCCCAGCGAGACGGTGGCGGTGCAGGCGGAGAACAGCAGG‑GCCAGGCGGCTGCCGAGGGAAAcc                                                                                                 >  5:73951/1‑149 (MQ=255)                                                      gAAACAATGACAGGCGCGAGTCCAGCAGTTGTTGGTCGAGTTCGACGAAGTGCTGCTCGCTGGCCCGGCTGAACAGCAGACCGGCGCCCAGCGAGACGGTGGCGGTGCAGGCGGCGAACAGCAGG‑GCCAGGCGGCTGCCGAGGGAAAcc                                                                                                 >  3:270037/1‑149 (MQ=255)                                                           aaTGACAGGCGCGAGTCCAGCAGTTGTTGGTCGAGTTCGACGAAGTGCTGCTCGCTGGCCCGGCTGAACAGCAGACCGGCGCCCAGCGAGACGGTGGCGGTGCAGGCGGCGAACAGCAGG‑GCCAGGCGGCTGCCGAGGGAAACCCGgcg                                                                                            >  2:88684/1‑149 (MQ=255)                                                            aTGACAGGCGCGAGTCCAGCAGTTGTTGGTCGAGTTCGACGAAGTGCTGCTCGCTGGCCCGGCTGAACAGCAGACCGGCGCCCAGCGAGACGGTGGCGGTGCAGGCGGCGAACAGCAGG‑GCCAGGCGGCTGCCGAGGGAAACCCGgcgc                                                                                           <  5:122377/149‑1 (MQ=255)                                                                   gcgcGAGTCCAGCAGTTGTTGGTCGAGTTCGACGAAGTGCTGCTCGCTGGCCCGGCTGAACAGCAGACCGGCGCCCAGCGAGACGGTGGCGGTGCAGGCGGCGAACAGCAGG‑GCCAGGCGGCTGCCGAGGGAAACCCGGCGCATCACTc                                                                                    >  6:235028/1‑149 (MQ=255)                                                                     gcgAGTCCAGCAGTTGTTGGTCGAGTTCGACGAAGTGCTGCTCGCTGGCCCGGCTGAACAGCAGACCGGCGCCCCGCGCGACGGTGGCGGTGCAGGCGGCGAACAGCAGG‑GCCAGGCGGCTGCCGAGGGAACCCCGGCGCATCACTCgg                                                                                  >  4:329321/1‑149 (MQ=255)                                                                      cgAGTCCAGCAGTTGTTGGTCGAGTTCGACGAAGTGCTGCTCGCTGGCCCGGCTGAACAGCAGACCGGCGCCCAGCGAGACGGTGGCGGTGCAGGCGGCGAACAGCAGG‑GCCAGGCGGCTGCCGAGGGAAACCCGGCGCATCACTCGGt                                                                                 <  6:40147/149‑1 (MQ=255)                                                                            cagcagTTGTTGGTCGAGTTCGACGAAGTGCTGCTCGCTGGCCCGGCTGAACAGCAGACCGGCGCCCAGCGAGACGGTGGCGGTGCAGGCGGCGAACAGCAGG‑GCCAGGCGGCTGCCGAGGGAAACCCGGCGCATCACTCGGTGCGctc                                                                           >  2:212769/1‑149 (MQ=255)                                                                                 gttgttGGTCGAGTTCGACGAAGTGCTGCTCGCTGGCCCGGCTGAACAGCAGACCGGCGCCCAGCGAGACGGTGGCGGTGCAGGCGGCGAACAGCAGG‑GCCAGGCGGCTGCCGAGGGAAACCCGGCGCATCACTCGGTGCGCTCTTCGa                                                                      <  8:89900/149‑1 (MQ=255)                                                                                  ttgttgGTCGAGTTCGACGAAGTGCTGCTCGCTGGCCCGGCTGAACAGCAGACCGGCGCCCAGCGAGACGGTGGCGGTGCAGGCGGCGAACAGCAGG‑GCCAGGCGGCTGCCGAGGGAAACCCGGCGCATCACTCGGTGCGCTCTTCGAg                                                                     <  2:220132/149‑1 (MQ=255)                                                                                    gttgGTCGAGTTCGACGAAGTGCTGCTCGCTGGCCCGGCTGAACAGCAGACCGGCGCCCAGCGAGACGGTGGCGGTGCAGGCGGCGAACAGCAGG‑GCCAGGCGGCTGCCGAGGGAAACCCGGCGCATCACTCGGTGCGCTCTTCGAGt                                                                    <  6:335807/148‑1 (MQ=255)                                                                                    gttgGTCGAGTTCGACGAAGTGCTGCTCGCTGGCCCGGCTGAACAGCAGACCGGCGCCCAGCGAGACGGTGGCGGTGCAGGCGGCGAACAGCAGG‑GCCAGGCGGCTGCCGAGGGAAACCCGGCGCATCACTCGGTGCGCTCTTCGAGt                                                                    >  5:335807/1‑148 (MQ=255)                                                                                       ggTCGAGTTCGACGAAGTGCACCTCGCTGGCCCGGCTGAACAGCAGACCGGCGCCCAGCGAGACGGTGGCGGTGCAGGCGGCGAACAGCAGG‑GCCAGCCGGCTGACGAGGGAAACCCGGCGCATCACTCGGTGCGCTCTTCGAGGACg                                                                 >  4:240763/1‑148 (MQ=255)                                                                                             gTTCGACGAAGTGCTGCTCGCTGGCCCGGCTGAACAGCAGACCGGCGCCCAGCGAGACGGTGGCGGTGCAGGCGGCGAACAGCAGG‑GCCAGGCGGCTGCCGAGGGAAACCCGGCGCATCACTCGGTGCGCTCTTCGAGTACGTAACCCa                                                          <  2:138266/149‑1 (MQ=255)                                                                                              ttCGACGAAGTGCTGCTCGCTGGCCCGGCTGAACAGCAGACCGGCGCCCAGCGAGACGGTGGCGGTGCAGGCGGCGAACAGCAGG‑GCCAGGCGGCTGCCGAGGGAAACCCGGCGCATCACTCGGTGCGCTCTTCGAGTACGTAACCCAt                                                         >  2:55639/1‑149 (MQ=255)                                                                                                 gacgaAGTGCTGCTCGCTGGCCCGGCTGAACAGCAGACCGGCGCCCAGCGAGACGGTGGCGGTGCAGGCGGCGAACAGCAGG‑GCCAGGCGGCTGCCGAGGGAAACCCGGCGCATCACTCGGTgcg                                                                              <  6:8611/125‑1 (MQ=255)                                                                                                 gacgaAGTGCTGCTCGCTGGCCCGGCTGAACAGCAGACCGGCGCCCAGCGAGACGGTGGCGGTGCAGGCGGCGAACAGCAGG‑GCCAGGCGGCTGCCGAGGGAAACCCGGCGCATCACTCGGTgcg                                                                              >  5:8611/1‑125 (MQ=255)                                                                                                 gacgaAGTGCTGCTCGCTGGCCCGGCTGAACAGCAGACCGGCGCCCAGCGAGACGGTGGCGGTGCAGGCGGCGAACAGCAGG‑GCCAGGCGGCTGCCGAGGGAAACCCGGCGCATCACTCGGTGCGCTCTTCGAGTACGTAACCCATGcc                                                      >  7:245781/1‑149 (MQ=255)                                                                                                  acgaAGTGCTGCTCGCTGGCCCGGCTGAACAGCAGACCGGCGCCCAGCGAGACGGTGGCGGTGCAGGCGGCGAACAGCAGG‑GCCAGGCGGCTGCCGAGGGAAACCCGGCGCATCACTCGGTGCGCTCTTCGAGTACGTAACCCATGCcg                                                     >  5:191525/1‑149 (MQ=255)                                                                                                      aGTGCTGCTCGCTGGCCCGGCTGAACAGCAGACCGGCGCCCAGCGAGACGGTGGCGGTGCAGGCGGCGAACAGCAGG‑GCCAGGCGGCTGCCGAGGGAAACCCGGCGCATCACTCGGTGCGCTCTTCGAGTACGTAACCCATGCCGCGGa                                                 >  2:360163/1‑149 (MQ=255)                                                                                                          ctgctCGCTGGCCCGGCTGAACAGCAGACCGGCGCCCAGCGAGACGGTGGCGGTGCAGGCGGCGAACAGCAGG‑GCCAGGCGGCTGCCGAGGGAAACCCGGCGCATCACTCGGTgc                                                                               >  5:123674/1‑115 (MQ=255)                                                                                                          ctgctCGCTGGCCCGGCTGAACAGCAGACCGGCGCCCAGCGAGACGGTGGCGGTGCAGGCGGCGAACAGCAGG‑GCCAGGCGGCTGCCGAGGGAAACCCGGCGCATCACTCGGTgc                                                                               <  6:123674/115‑1 (MQ=255)                                                                                                            tctcgctgggcgccggtctgctgttcagccgggccagcgagACGGTGGCGGTGCAGGCGGCGAACAGCAGG‑GCCAGGCGGCTGCCGAGGGAAACCCGGCGCATCACTCGGTGCGCTCTTCGAGTACGTAACCCATGCCGCGGACGgtgt                                           >  3:301698‑M2/42‑149 (MQ=255)                                                                                                             CTCGCTGGCCCGGCTGAACAGCAGACCGGCGCCCAGCGAGACGGTGGCGGTGCAGGCGGCGAACAGCAGG‑GCCAGGCGGCTGCCGAGGGAAACCCGGCGCATCACTCGGTGCGCTCTTCGAGTACGTAACCCATGCCGCGGACGgtgt                                           >  1:212769‑M1/1‑148 (MQ=255)                                                                                                              tcgctgggcgccggtctgctgttcagccgggccagcgagACGGTGGCGGCGCAGGCGGCGAACAGCAGG‑GCCAGGCGGCTGCCGAGGGAAACCCGGCGCATCACTCGGTGCGCTCTTCGAGTACGTAACCCATGCCGCGGACGGtgtg                                          >  8:350064‑M2/40‑148 (MQ=255)                                                                                                                gctgggcgccggtctgctgttcagccgggccagcgagACGGTGGCGGTGCAGGCGGCGAACAGCAGG‑GCCAGGCGGCTGCCGAGGGAAACCCGGCGCATCACTCGGTGCGCTCTTCGAGTACGTAACCCATGCCGCGGACGGTGTGGAt                                       >  5:285564‑M2/38‑149 (MQ=255)                                                                                                                 ctgggcgccggtctgctgttcagccgggccagcgagACGGTGGCGGTGCAGGCGGCGAACAGCAGG‑GCCAGGCGGCTGCCGAGGGAAACCCGGCGCATCACTCGGTGCGCTCTTCGAg                                                                     <  2:127973‑M2/82‑1 (MQ=255)                                                                                                                    GCCCGGCTGAACAGCAGACCGGCGCCCAGCGAGACGGTGGCGGTGCAGGCGGCGAACAGCAGG‑GCCAGGCGGCTGCCGAGGGAAACCCGGCGCATCACTCGGTGCGCTCTTCGAGTACGTAACCCATGCCGCGGACGGTGTGGATCa                                     >  6:139189‑M1/1‑147 (MQ=255)                                                                                                                      ccGGCTGAACAGCAGACCGGCGCCCAGCGAGACGGTGGCGGTGCAGGCGGCGAACAGCAGG‑GCCAGGCGGCTGCCGAGGGAAACCCGGCGCATCACTCGGTGCGCTCTTCGAGTACGTAACCCATGCCGCGGACGGTGTGGATCAGCtt                                 >  8:150493/1‑149 (MQ=255)                                                                                                                        ggCTGAACAGCAGACCGGCGCCCAGCGAGACGGTGGCGGTGCAGGCGGCGAACAGCAGG‑GCCAGGCGGCTGCCGAGGGAAACCCGgc                                                                                             <  5:154258/87‑1 (MQ=255)                                                                                                                        ggCTGAACAGCAGACCGGCGCCCAGCGAGACGGTGGCGGTGCAGGCGGCGAACAGCAGG‑GCCAGGCGGCTGCCGAGGGAAACCCGgc                                                                                             >  6:154258/1‑87 (MQ=255)                                                                                                                        ggCTGAACAGCAGACCGGCGCCCAGCGAGACGGTGGCGGTGCAGGCGGCGAACAGCAGG‑GCCAGGCGGCTGCCGAGGGAAACCCGGCGCATCACTCGGTGCGCTCTTCGAGTACGTAACCCATGCCGCGGACGGTGTGGATCAGCttgt                               >  4:226970/1‑149 (MQ=255)                                                                                                                        ggCTGAACAGCAGACCGGCGCCCAGCGAGACGGTGGCGGTGCAGGCGGCGAACAGCAGG‑GCCAGGCGGCTGCCGAGGGAAACCCGGAGCATCACTCGGTGCGCTCTTCGAGTACGTAACCCATGCCGCGGACGGTGTGGATCAGCttgt                               >  6:209254/1‑149 (MQ=255)                                                                                                                             acccgcagACCGGCGCCCAGCGAGACGGCGGCCGTGCAGGCGGCGAACAGCAGG‑GCCAGGCGGCTGCCGAGGGAAACCCGGCGCATCACTCGGTGCGCTCTTCGAGTACGTAACCCATGCCGCGGACGGTGTGGATCAGCTTGTTggg                           <  8:139104/144‑1 (MQ=255)                                                                                                                              tgctgttcagccgggccagcgagACGGTGGCGGCGCAGGCGGCGAACAGCAGG‑GCCAGGCGGCTGCCGAGGGAAACCCGGCGCATCACTCGGTGCGCTCTTCGAGTACGTAACCCATGCCGCGGACGGTGTGGATCAGCTTGTTGGGGt                         <  7:350064‑M2/126‑1 (MQ=255)                                                                                                                              aCAGCAGACCGGCGCCCAGCGAGACGGTGGCGGTGCAGGCGGCGAACAGCAGG‑GCCAGGCGGCTGCCGAGGGAAACCCGGCGCATCACTCGGTGCGCTCTTCGa                                                                      >  2:25072/1‑104 (MQ=255)                                                                                                                              aCAGCAGACCGGCGCCCAGCGAGACGGTGGCGGTGCAGGCGGCGAACAGCAGG‑GCCAGGCGGCTGCCGAGGGAAACCCGGCGCATCACTCGGTGCGCTCTTCGa                                                                      <  1:25072/104‑1 (MQ=255)                                                                                                                                agcagACCGGCGCCCAGCGAGACGGTGGCGGTGCAGGCGGCGAACAGCAGG‑GCCAGGCGGCTGCCGAGGGAAACCCGGCGCATCACTCGGTGCGCTCTTCGAGTACGTAACCCATGCCGCGGACGGTGTGGATCAGCTTGTTGGGGTGc                       <  4:270037/149‑1 (MQ=255)                                                                                                                                 gcagACCGGCGCCCAGCGAGACGGTGGCGGTGCAGGCGGCGAACAGCAGG‑GCCAGGCGGCTGCCGAGGGAAACCCGGCGCATCACTCGGTGCGCTCTTCGAGTACGTAACCCATGCCGCGGACGGTGTGGATCAGCTTGTTGGGGTGCg                      >  7:319492/1‑149 (MQ=255)                                                                                                                                 gcagACCGGCGCCCAGCGAGACGGTGGCGGTGCAGGCGGCGAACAGCAGG‑GCCAGGCGGCTGCCGAGGGAAACCCGGCGCATCACTCGGTGCGCTCTTCGAGTACGTAACCCATGCCGCGGACGGTGTGGATCAGCTTGTTGGGGTGCg                      <  1:360163/149‑1 (MQ=255)                                                                                                                                  cagACCGGCGCCCAGCGAGACGGTGGCGGTGCAGGCGGCGAACAGCAGG‑GCCAGGCGGCTGCCGAGGGAAACCCGGCGCATCACTCGGTGCGCTCTTCGAGTACGTAACCCATGCCGCGGACGGTGTGGATCAGCTTGTTGGGGTGCgg                     <  8:245781/149‑1 (MQ=255)                                                                                                                                     aCCGGCGCCCAGCGAGACGGTGGCGGTGCAGGCGGCGAACAGCAGGTGCCAGGCGGCTGCCGAGGGAAACCCGGCGCATCACTCGGTGCGCTCTTCGAGTACGTAACCCATGCCGCGGACGGTGTGGATCAGCTTGTTGGGGTGCGGgt                   >  1:82107/1‑149 (MQ=255)                                                                                                                                            gccagcgagACGGTGGCGGTGCAGGCGGCGAACAGCAGG‑GCCAGGCGGCTGCCGAGGGAAACCCGGCGCATCACTCGGTGCGCTCTTCGAGTACGTAACCCATGCCGCGGACGGTGTGGATCAGCTTGTTGGGGTGCGGGTCGTCGAtt           <  6:285564‑M2/140‑1 (MQ=255)                                                                                                                                                  gagACGGTGGCGGTGCAGGCGGCGAACAGCAGG‑GCCAGGCGGCTGCCGAGGGAAACCCGGCGCATCACTCGGTGCGCTCTTCGAGTACg                                                                 >  2:176683‑M2/4‑89 (MQ=255)                                                                                                                                                  gagACGGTGGCGGTGCAGGCGGCGAACAGCAGG‑GCCAGGCGGCTGCCGAGGGAAACCCGGCGCATCACTCGGTGCGCTCTTCGAGTACg                                                                 <  1:176683‑M2/86‑1 (MQ=255)                                                                                                                                                     aCGGTGGCGGTGCAGGCGGCGAACAGCAGG‑GCCAGGCGGCTGCCGAGGGAAACCCGGCGCATCACTCTGTGCGCTCTTCGAGTACGTAACCCATGCCGCGGACGGTGTGGATCAGCTTGTTGGGGTGCGGGTCGTCGATTTTcaggcgc  <  6:73951/149‑1 (MQ=255)                                                                                                                                                     |                                                                                                                                                      CGGCAGGCGGGCCTGGAGCTCATCAGCCGTGCTGACGCCAGCCAGTTGCGTCCGAAACAATGACAGGCGCGAGTCCAGCAGTTGTTGGTCGAGTTCGACGAAGTGCTGCTCGCTGGCCCGGCTGAACAGCAGACCGGCGCCCAGCGAGACGGTGGCGGTGCAGGCGGCGAACAGCAGG‑GCCAGGCGGCTGCCGAGGGAAACCCGGCGCATCACTCGGTGCGCTCTTCGAGTACGTAACCCATGCCGCGGACGGTGTGGATCAGCTTGTTGGGGTGCGGGTCGTCGATTTTCAGGCGC  >  NC_002947/2465425‑2465721

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.