New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 1930398	11 (0.330)	6 (0.210)	6/246	2.5	38.2%	intergenic (‑65/+40)	PP_1729/apeB	hypothetical protein/M18 family aminopeptidase
	?	NC_002947	= 1930414	10 (0.350)					intergenic (‑81/+24)	PP_1729/apeB	hypothetical protein/M18 family aminopeptidase

CGGGACGAACAGTGACAGGAACGGGGACATGGACAGCAATCCTTTTGCAGTGGGGCCATGTAACAAGCATAGCGCTTGACCAACGAGGCGTGATTGACCTTGAGCACGTTTAAGCAGGCGCGGCCTGTTCGAGGCGTCGAACCGCCGCGAACAGGCCGCGCCTGCTTACATCAAGGCAGCTCGCGGCTACGGTAGAACGCGGTCAGTACCTTCACCAGGTGCGCCAGGTCATGGCTGCCACACAGCTCGCGAATGGAGTGCATGGCAAAGGTCGGCAAACCGATATCCACC  >  NC_002947/1930268‑1930558                                                                                                                                                   |                                                                                                                                                 cGGGACGAACAGTGACAGGAACGGGGACATGGACAGCAATCCTTTTGCAGTGGGGCCATGTAACAAGCATAGCGCTTGACCAACGAGGCGTGATTGACCTTGAGCACGTTTAAGCAGGCGCGGCCTGTTCGAGGCGTCGAACCGCCGc                                                                                                                                                 <  5:157397‑M2/148‑2 (MQ=255)         aCAGTGACAGGAACGGGGACATGGACAGCAATCCTTTTGCAGTGGGGCCATGTAACAAGCATAGCGCTTGACCAACGAGGCGTGATTGACCTTGAGCACGTTTAAGCAGGCGCGGCCTGTTCGAGGCGTCGAACCGCCGcgaacaggc                                                                                                                                         >  8:111664‑M2/1‑139 (MQ=255)                               ggACAGCAATCCTTTTGCAGTGGGGCCATGTAACAAGCATAGCGCTTGACCAACGAGGCGTGATTGACCTTGAGCACGTTTAAGCAGGCGCGGCCTGTTCGAGGCGTCGAACCGCCGCGAACAGGCCGCGCCTGCTTACATCAAGGCa                                                                                                                   >  7:36262/1‑148 (MQ=255)                                     cAATCCTTTTGCAGTGGGGCCATGTAACAAGCATAGCGCTTGACCAACGAGGCGTGATTGACCTTGAGCACGTTTAAGCAGGCGCGGCCTGTTCGAGGCGTCGAACCGCCGCGAACAGGCCGCGCCTGCTTACATCAAGGCAGCTcgc                                                                                                             >  6:171265/1‑148 (MQ=255)                                                                 aaGCATAGCGCTTGACCAACGAGGCGTGATTGACCTTGAGCACGTTTAAGCAGGCGCGGCCAGTTAGCGGCGGCGAACCCCCGCGCACACGCCCCCCCAGCGTACCAAAAAGCCCCTCGCGGCGACCGTAGAACGCGGTCACTAccat                                                                                 >  4:137483/1‑146 (MQ=255)                                                                         cggtggcccACCGCGGGGTGATGCACCTTGCGCCCGTTAACGCCGGCGCGGCCTGTGCGCGGCGGCGACCCGCCGCCAACTGGCCGCGCCTGCTTACATCAAGGCAGCTCGCGGCTACGGTAGAACGCGGTCAGTACCTTCACCAGGt                                                                         <  3:166154/141‑1 (MQ=255)                                                                                 cAACGTGGCTTTTTTGACCTTTAGCACGTTTATGCTGGCGCGGCCTGTTCGCGGCGGCTAACCGCCGCTAACTGGCCGCGCCTGCTTACATCAAGGCAGCTCGCGGCTACGGTAGAACGCGGTCAGTACCTTCACCAGGTGCGCCAgg                                                                 <  8:36262/148‑1 (MQ=255)                                                                                           tttttgaccttgaccACTTTTAAGCTGGCGCGGCTTGTTCTCGGCGTCTAACCGCCGCTAACTGGCCGCGCCTGCTTACATCAAGGCAGCTCGCGGCTACGGTAGAACGCGGTCAGTACCTTCACCAGGTGCGCCAGGTCATGGCTGc                                                       <  2:13655/145‑1 (MQ=255)                                                                                             aTTGACCTTGAGCACGTTTAAGCAGGCGCGGCCTGTTCGAGGCGTCGAACCGCCGCGAACAGGCCGCGCCTGCTTACATCAAGGCAGCTCGCGGCTACGGTAGAACGCGGTCAGTACCTTCACCAGGTGCGCCAGGTCATGGCTGcc                                                      >  6:81417/1‑147 (MQ=255)                                                                                                                 aGCAGGCGCGGCCTGTTCGAGGCGTCGAACCGCCGCGAACAGGCCGCGCCTGCTTACATCAAGGCAGCTCGCGGCTACGGTAGAACGCGGTCAGTACCTTCACCAGGTGCGCCAGGTCATGGCTGCCACACAGCTCGCGAATGGAGt                                  <  5:171265/147‑1 (MQ=255)                                                                                                                    aGGCGCGGCCGGTTCGAGGCGTCGAACCGCCGCTAACAGGCCGCGCCTGCTTACATCAAGGCAGCTCGCGGCTACGGTAGAACGCGGTCAGTACCTTCACCAGGTGCGCCAGGTCATGGCTGCCACACAGCTCGCGAATGGAGTGCAt                              <  6:85781/148‑1 (MQ=255)                                                                                                                             cTGTTCGAGGCGTCGAACCGCCGcgaacaggccgcgcctgcttaaacgtgctcaaggtcaatcacgcctcgttggtcaagcg                                                                                       <  2:172140‑M2/82‑60 (MQ=255)                                                                                                                              tGTTCGAGGCGTCGAACCGCCGcgaacaggccgcgcctgcttaaacgtgctcaaggtcaatcacgcctcgttggtcaagcgctatgcttgttacatggccccactgcaaaaggattgcggtccatgtccccgttcctgtcactgttcg                    <  1:21164‑M2/148‑127 (MQ=255)                                                                                                                              tGTTCGAGGCGTCGAACCGCCGcgaacaggccgcgcctgcttaaacgtgctcaaggtcaatcacgcctcgttggtcaagcgc                                                                                      >  1:172140‑M2/1‑22 (MQ=255)                                                                                                                               gTTCGAGGCGTCGAACCGCCGcgaacaggccgcgcctgcttaaacgtgctcaaggtcaatcacgcctcgttggtcaagcgctatgcttgttacatggccccactgcaaaaggattgctgtccatgtccccgttcctgtcactgttcgt                   <  6:62815‑M2/148‑128 (MQ=255)                                                                                                                                ttCGAGGCGTCGAACCGCCGcgaacaggccgcgcctgcttaaacgtgctcaaggtcaatcacgcctcgttggtcaagcgctatgcttgttacatggccccactgcaaaaggattgctgtccatgtccccgttcctgtcactgttcgtc                  <  2:69335‑M2/148‑129 (MQ=255)                                                                                                                                               cgccgcGAACAGGCCGCGCCTGCTTACATCAAGGCAGCTCGCGGCTACGGTAGAACGCGGTCAGTACCTTCACCAGGTGCGCCAGGTCATGGCAGCCACACAGCTCGCGAATGGAGTGCATGGCAAAGGTCGGCAAACCGATATCCAc   >  4:162856/1‑148 (MQ=255)                                                                                                                                                gccgcgaacaggccgcgcctgcttaaacgtgctcaaggtcaatcacgcctcgttggtcaagcgctatgcttgttacatggccccactgcaaaaggattgctgtccatgtccccgttcctgtcactgttcgtcccggtgttcctgttcc  >  1:69335‑M2/1‑4 (MQ=255)                                                                                                                                                   |                                                                                                                                                 CGGGACGAACAGTGACAGGAACGGGGACATGGACAGCAATCCTTTTGCAGTGGGGCCATGTAACAAGCATAGCGCTTGACCAACGAGGCGTGATTGACCTTGAGCACGTTTAAGCAGGCGCGGCCTGTTCGAGGCGTCGAACCGCCGCGAACAGGCCGCGCCTGCTTACATCAAGGCAGCTCGCGGCTACGGTAGAACGCGGTCAGTACCTTCACCAGGTGCGCCAGGTCATGGCTGCCACACAGCTCGCGAATGGAGTGCATGGCAAAGGTCGGCAAACCGATATCCACC  >  NC_002947/1930268‑1930558

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.