New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 380130	51 (0.860)	4 (0.070)	4/242	NT	7.2%	coding (427/1107 nt)	gbcB	glycine‑betaine dioxygenase subunit
	?	NC_002947	= 380163	55 (0.980)					coding (460/1107 nt)	gbcB	glycine‑betaine dioxygenase subunit

GGTGGCCTGGTGTCGAACTTCCTGCATGACACCATGCACGAAGGCGCCGAGCTGCCGGTGCACGGCCCGGTGGGGCTGTTCAACGCCATCGACTTCCCTGCTGGCAAGGTGCTGTACCTGTCGGGCGGCGTCGGTATTACCCCAGTGATGTCGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/379977‑380130 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atgtcgaCGTTGGCATTGGTGTCGTAGAACCAGCGCGCCATCGACATCACTGGGGTAATACCGACGCCGCCCGACAGGTACAGCACCTTGCCAGCAGGGAAGTCGATGGCGTTGAACAGCCCCACCGGGCCGTGCACCGGCAGCTCGGCGCC  <  NC_002947/380163‑380019                                                                                                                                                                                                                                                                                                             GGTGGCCTGGTGTCGAACTTCCTGCATGACACCATGCACGAAGGCGCCGAGCTGCCGGTGCACGGCCCGGTGGGGCTGTTCAACGCCATCGACTTCCCTGCTGGCAAGGTGCTGTACCTGTCGGGCGGCGTCGGTATTACCCCAGTGAT                                                                                                                                                        <  8:16906/149‑1     GCCTGGGGTCGAACTTCCTGCATGACACCATGCACGAAGGCGCCGAGCTGCCGGTGCACGGCCCGGTGGGGCTGTTCAACGCCATCGACTTCCCTGCTGGCAAGGTGCTGTACCTGTCGGGCGGCGTCGGTATTACCCCAGTGATGTC                                                                                                                                                     <  4:118396/148‑1             TCGAACTTCCTGCATGACACCATGCACGAAGGCGCCGAGCTGCCGGTGCACGGCCCGGTGGGGCTGTTCAACGCCATCGACTTCCCTGCTGGCAAGGTGCTGTACCTGTCGGGCGGCGTCGGTATTACCCCAGTGATGTCGACGTTGG                                                                                                                                             >  5:57753/1‑148                                             CGCCGAGCTGCCGGTGCACGGCCCGGTGGGGCTGTTCAACGCCATCGACTTCCCTGCTGGCAAGGTGCTGTACCTGTCGGGCGGCGTCGGTATTACCCCAGTGATGTCGACGTTGGCATTGGTGTCGTAGAACCAGCGCGCCATCGACA                                                                                                            >  6:269992/1‑149                                                  AGCTGCCGGTGCACGGCCCGGTGGGGCTGTTCAACGCCATCGACTTCCCTGCTGGCAAGGTGCTGTACCTGTCGGGCGGCGTCGGTATTACCCCAGTGATGTCGACGTTGGCATTGGTGTCGTAGAACCAGCGCGCCATCGACATCACT                                                                                                       <  5:269992/149‑1                                                    CTGCCGGTGCACGGCCCGGTGGGGCTGTTCAACGCCATCGACTTCCCTGCTGGCAAGGTGCTGTACCTGTCGGGCGGCGTCGGTATTACCCCAGTGATGTCGACGTTGGCATTGGTGTCGTAGAACCAGCGCGCCATCGACATCACTGG                                                                                                     <  6:57753/149‑1                                                                                                                                                     TGTCGACGTTGGAATTGGTGTCGTAGAACCAGCGCGCCATCGACATCACTGGGGTAATACCGACGCCGCACGACAGGTACAGCACCTTGCCAGCAGGGAAGTCGATGGCGTTGAACAGCCCCACCGGGCCGTGCACCGGCAGCTCGGCG    <  6:119276/149‑1                                                                                                                                                       TCGACGTTGGCATTGGTGTCGTAGAACCAGCGCGCCATCGACATCACTGGGGTAATACCGACGCCGCCCGACAGGTACAGCACCTTGCCAGCAGGGAAGTCGATGGCGTTGAACAGCCCCACCGGGCCGTGCACCGGCAGCTCGGCGCC  >  7:116357/1‑149                                                                                                                                                                                                                                                                                                             GGTGGCCTGGTGTCGAACTTCCTGCATGACACCATGCACGAAGGCGCCGAGCTGCCGGTGCACGGCCCGGTGGGGCTGTTCAACGCCATCGACTTCCCTGCTGGCAAGGTGCTGTACCTGTCGGGCGGCGTCGGTATTACCCCAGTGATGTCGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/379977‑380130 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atgtcgaCGTTGGCATTGGTGTCGTAGAACCAGCGCGCCATCGACATCACTGGGGTAATACCGACGCCGCCCGACAGGTACAGCACCTTGCCAGCAGGGAAGTCGATGGCGTTGAACAGCCCCACCGGGCCGTGCACCGGCAGCTCGGCGCC  <  NC_002947/380163‑380019

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.