New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 380130	51 (0.860)	4 (0.070)	4/242	NT	7.2%	coding (427/1107 nt)	gbcB	glycine‑betaine dioxygenase subunit
	?	NC_002947	= 380163	55 (0.980)					coding (460/1107 nt)	gbcB	glycine‑betaine dioxygenase subunit

CTGGTGTCGAACTTCCTGCATGACACCATGCACGAAGGCGCCGAGCTGCCGGTGCACGGCCCGGTGGGGCTGTTCAACGCCATCGACTTCCCTGCTGGCAAGGTGCTGTACCTGTCGGGCGGCGTCGGTATTACCCCAGTGATGTCGATGGCGCGCTGGTTCTACGACACCAATGCCAACGTCGACATGGTGTTCGTCCACAGCGCCCGTTCGCCGAAAGACATCATCTACCACCGCGAGCTGGAACAGATGGCGTCGCGCATCCCCAACTTCAGCCTGCACATCATTTGCGAG  >  NC_002947/379983‑380276                                                                                                                                                    |                                                                                                                                                   cTGGTGTCGAACTTCCTGCATGACACCATGCACGAAGGCGCCGAGCTGCCGGTGCACGGCCCGGTGGGGCTGTTCAACGCCATCGACTTCCCTGCTGGCAAGGTGCTGTACCTGTCGGGCGGCGTCGGTATTACCCCAGTGATGTCGAt                                                                                                                                                   >  1:125837/1‑149 (MQ=255)    gtgtCGAACTTCCTGCATGACACCATGCACGAAGGCGCCGAGCTGCCGGTGCACGGCCCGGTGGGGCTGTTCAACGCCATCGACTTCCCTGCTGGCAAGGTGCTGTACCTGTCGGGCGGCGTCGGTATTACCCCAGTGATGTCGATg                                                                                                                                                  <  6:62987/147‑1 (MQ=255)       tCGAACTTCCTGCATGACACCATGCACGAAGGCGCCGAGCTGCCGGTGCACGGCCCGGTGGGGCTGTTCAACGCCATCGACTTCCCTGCTGGCAAGGTGCTGTACCTGTCGGGCGGCGTCGGTATTACCCCAGTGATGTCGAcgttgg                                                                                                                                              >  5:57753‑M1/1‑142 (MQ=255)         gAACTTCCTGCATGACACCATGCACGAAGGCGCCGAGCTGCCGGTGCACGGCCCGGTGGGGCTGTTCAACGCCATCGACTTCCCTGCTGGCAAGGTGCTGTACCTGTCGGGCGGCGTCGGTATTACCCCAGTGATGTCGATGGCGCGCt                                                                                                                                           <  2:373128/149‑1 (MQ=255)          aaCTTCCTGCATGACACCATGCACGAAGGCGCCGAGCTGCCGGTGCACGGCCCGGTGGGGCTGTTCAACGCCATCGACTTCCCTGCTGGCAAGGTGCTGTACCTGTCGGGCGGCGTCGGTATTACCCCAGTGATGTCGATGGCGCGCTg                                                                                                                                          <  4:303844/149‑1 (MQ=255)           aCTTCCTGCATGACACCATGCACGAAGGCGCCGAGCTGCCGGTGCACGGCCCGGTGGGGCTGTTCAACGACATCGACTTCCCTGCTGGCAAGGTGCTGTACCTGTCGGGCGGCGTCGGTATTACCCCAGTGATGTCGATGGCGCGCTgg                                                                                                                                         <  4:280013/149‑1 (MQ=255)                   cATGACACCATGCACGAAGGCGCCGAGCTGCCGGTGCACGGCCCGGTGGGGCTGTTCAACG‑CATCGACTTCCCTGCTGGCAAGGTGCTGTACCTCTCGGGCGGCGTCGGTATTACCCCAGTGATGTCGATGGCGCGCTGGTTCTACGa                                                                                                                                 <  1:289901/148‑1 (MQ=255)                            aTGCACGAAGGCGCCGAGCTGCCGGTGCACGGCCCGGTGGGGCTGTTCAACGCCATCGACTTCCCTGCTGGCAAGGTGCTGTACCTGTCGGGCGGCGTCGGTATTACCCCAGTGATGTCGATGGCGCGCTGGTTCTACGACACCAATGc                                                                                                                        <  8:53952/149‑1 (MQ=255)                                  gAAGGCGCCGAGCTGCCGGTGCACGGCCCGGTGGGGCTGTTCAACGCCATCGACTTCCCTGCTGGCAAGGTGCTGTACCTGTCGGGCGGCGTCGGTATTACCCCAGTGATGTCGATGGCGCGCTGGTTCTACGACACCAATGCCAAc                                                                                                                    <  2:125837/147‑1 (MQ=255)                                     ggCGCCGAGCTGCCGGTGCACGGCCCGGTGGGGCTGTTCAACGCCATCGACTTCCCTGCTGGCAAGGTGCTGTACCTGTCGGGCGGCGTCGGTATTACCCCAGTGATGTCGATGGCGCGCTGGTTCTACGACACCAATGCCAACGtcga                                                                                                               >  7:116357‑M2/1‑145 (MQ=255)                                       cgcCGAGCTGCCGGTGCACGGCCCGGTGGGGCTGTTCAACGCCATCGACTTCCCTGCTGGCAAGGTGCTGTACCTGTCGTGCGGCGTCGGTATTACCCCAGTGATGTCGATGGCGCGCTGGTTCTACGACACCAATTCCAACGtcgaca                                                                                                             <  6:119276‑M2/149‑7 (MQ=255)                                       cgcCGAGCTGCCGGTGCACGGCCCGGTGGGGCTGTTCAACGCCATCGACTTCCCTGCTGGCAAGGTGCTGTACCTGTCGGGCGGCGTCGGTATTACCCCAGTGATGTCGAcgttggcattggtgtcgtagaaccagcgcgccatcgaca                                                                                                             >  6:269992‑M1/1‑110 (MQ=255)                                            aGCTGCCGGTGCACGGCCCGGTGGGGCTGTTCAACGCCATCGACTTCCCTGCTGGCAAGGTGCTGTACCTGTCGGGCGGCGTCGGTATTACCCCAGTGATGTCGAcgttggcattggtgtcgtagaaccagcgcgccatcgacatcact                                                                                                        <  5:269992‑M1/149‑45 (MQ=255)                                              cTGCCGGTGCACGGCCCGGTGGGGCTGTTCAACGCCATCGACTTCCCTGCTGGCAAGGTGCTGTACCTGTCGGGCGGCGTCGGTATTACCCCAGTGATGTCGAcgttggcattggtgtcgtagaaccagcgcgccatcgacatcactgg                                                                                                      <  6:57753‑M1/149‑47 (MQ=255)                                                gCCGGTGCACGGCCCGGTGGGGCTGTTCAACGCCATCGACTTCCCTGCTGGCAAGGTGCTGTACCTGTCGGGCGGCGTCGGTATTACCCCAGTGATGTCGATGGCGCGCTGGTTCTACGACACCAATGCCAACGTCGACATGGTGTTCg                                                                                                    >  7:98421/1‑149 (MQ=255)                                                 ccGGTGCACGGCCCGGTGGGGCTGTTCAACGCCATCGACTTCCCTGCTGGCAAGGTGCTGTACCTGTCGGGCGGCGTCGGTATTACCCCAGTGATGTCGATGGCGCGCTGGTTCTACGACACCAATGCCAACGTCGACATGGTGTTc                                                                                                     <  6:195103/147‑1 (MQ=255)                                                       cACGGCCCGGTGGGGCTGTTCAACGCCATCGACTTCCCTGCTGGCAAGGTGCTGTACCTGTCGGGCGGCGTCGGTATTACCCCAGTGATGTCGATGGCGCGCTGGTTGTACGACACCAATGCCAACGTCGACATGGTGTTCGTCCACAg                                                                                             >  5:331288/1‑149 (MQ=255)                                                       cACGGCCCGGTGGGGCTGTTCAACGCCATCGACTTCCCTGCTGGCAAGGTGCTGTACCTGTCGGGCGGCGTCGGTATTACCCCAGTGATGTCGATGGCGCGCTGGTTCTACGACACCAATGCCAACGTCGACATGGTGTTCGTCcaca                                                                                              <  7:333177/148‑1 (MQ=255)                                                          ggCCCGGTGGGGCTGTTCAACGCCATCGACTTCCCTGCTGGCAAGGTGCTGTACCTGTCGGGCGGCGTCGGTATTACCCCAGTTATGTCGATGGCGCGCTGGTTCTACGACACCAATGCCAACGTCGACATGGTGTTCGTCCACAgcgc                                                                                          <  2:227269/149‑1 (MQ=255)                                                            cccGGTGGGGCTGTTCAACGCCATCGACTTCCCTGCTGGCAAGGTGCTGTACCTGTCGGGCGGCGTCGGTATTACCCCAGTGATGTCGATGGCGCGCTGGTTCTACGACACCAATGCCAACGTCGACATGGTGTTCGTc                                                                                                  >  6:266830/1‑139 (MQ=255)                                                            cccGGTGGGGCTGTTCAACGCCATCGACTTCCCTGCTGGCAAGGTGCTGTACCTGTCGGGCGGCGTCGGTATTACCCCAGTGATGTCGATGGCGCGCTGGTTCTACGACACCAATGCCAACGTCGACATGGTGTTCGTc                                                                                                  <  5:266830/139‑1 (MQ=255)                                                                gTGGGGCTGTTCAACGCCATCGACTTCCCTGCTGGCAAGGTGCTGTACCTGTCGGGCGGCGTCGGTATTACCCCAGTGATGTCGATGGCGCGCTGGTTCTACGACACCAATGCCAACGTCGACATGGTGTTCGTCCACAGCGCCCGTTc                                                                                    <  4:353886/149‑1 (MQ=255)                                                                gTGGGGCTGTTCAACGCCATCGACTTCCCTGCTGGCAAGGTGCTGTACCTGTCGGGCGGCGTCGGTATTACCCCAGTGATGTCGATGGCGCGCTGGTTCTACGACACCAATGCCAACGTCGACATGGTGTTCGTCCACAGCGCCCGTTc                                                                                    <  6:167016/149‑1 (MQ=255)                                                                         ttCAACGCCATCGACTTCCCTGCTGGCAAGGTGCTGTACCTGTCGGGCGGCGTCGGTATTACCCCAGTGATGTCGATGGCGCGCTGGTTCTACGACACCAATGCCAACGTCGACATGGTGTTCGTCCACAGCGCCCGTTCGCCGaaa                                                                             <  4:261988/147‑1 (MQ=255)                                                                           cAACGCCATCGACTTCCCTGCTGGCAAGGTGCTGTACCTGTCGGGCGGCGTCGGTATTACCCCAGTGATGTCGATGGCGCGCTGGTTCTACGACACCAATGCCAACGTCGACATGGTGTTCGTCCACAGCGCCCGTTCGCCGAAAGAca                                                                         >  2:7518/1‑149 (MQ=255)                                                                           cAACGCCATCGACTTCCCTGCTGGCAAGGTGCTGTACCTGTCGGGCGGCGTCGGTATTACCCCAGTGATGTCGATGGCGCGCTGGTTCTACGACACCAATGCCAACGTCGACATGGTGTTCGTCCACAGCGCCCGTTCGCCGAAAGAc                                                                          <  6:331288/148‑1 (MQ=255)                                                                                 cATCGACTTCCCTGCTGGCAAGGTGCTGTACCTGTCGGGCGGCGTCGGTATTACCCCAGTGATGTCGATGGCGCGCTGGTTCTACGACACCAATGCCAACGTCGACATGGTGTTCGTCCACAGCGCCCGTTCGCCGAAAGa                                                                           >  6:49780/1‑141 (MQ=255)                                                                                 cATCGACTTCCCTGCTGGCAAGGTGCTGTACCTGTCGGGCGGCGTCGGTATTACCCCAGTGATGTCGATGGCGCGCTGGTTCTACGACACCAATGCCAACGTCGACATGGTGTTCGTCCACAGCGCCCGTTCGCCGAAAGa                                                                           <  5:49780/141‑1 (MQ=255)                                                                                    cGACTTCCCTGCTGGCAAGGTGCTGTACCTGTCGGGCGGCGTCGGTATTACCCCAGTGATGTCGATGGCGCGCTGGTTCTACGACACCAATGCCAACGTCGACATGGTGTTCGTCCACAGCGCCCGTTCGCCGAAAGACATCATCTac                                                                 >  5:276493/1‑148 (MQ=255)                                                                                      aCTTCCCTGCTGGCAAGGTGCTGTACCTGTCGGGCGGCGTCGGTATTACCCCAGTGATGTCGATGGCGCGCTGGTTCTACGACACCAATGCCAACGTCGACATGGTGTTCGTCCACAGCGCCCGTTCGCCGAAAGACATCATCTaccac                                                              >  5:266295/1‑149 (MQ=255)                                                                                      aCTTCCCTGCTGGCAAGGTGCTGTACCTGTCGGGCGGCGTCGGTATTACCCCAGTGATGTCGATGGCGCGCTGGTTCTACGACACCAATGCCAACGTCGACATGGTGTTCGTCCACAGCGCCCGTTCGCCGAAAGACATCATCTaccac                                                              >  1:225813/1‑149 (MQ=255)                                                                                             tgctgGCAAGGTGCTGTACCTGTCGGGCGGCGTCTGTATTACCCCAGTGATGTCGATGGCGCGCTGGTTCTACGACACCAATGCCAACGTCGACATGGTGTTCGTCCACAGCGCCCGTTCGCCGAAAGACATCATCTACCACCGCGAGc                                                       >  6:96958/1‑149 (MQ=255)                                                                                                    aaGGTGCTGTACCTGTCGGGCGGCGTCGGTATTACCCCAGTGATGTCGATGGCGCGCTGGTTCTACGACACCAATGCCAACGTCGACATGGTGTTCGTCCACAGCGCCCGTTCGCCGAAAGACATCATCTACCACCGCGAGCTGGAACa                                                <  6:266295/149‑1 (MQ=255)                                                                                                    aaGGTGCTGTACCTGTCGGGCGGCGTCGGTATTACCCCAGTGATGTCGATGGCGCGCTGGTTCTACGACACCAATGCCAACGTCGACATGGTGTTCGTCCACAGCGCCCGTTCGCCGAAAGACATCATCTACCACCGCGAGCTGGAACa                                                <  2:225813/149‑1 (MQ=255)                                                                                                      ggTGCTGTACCTGTCGGGCGGCGTCGGTATTACCCCAGTGATGTCGATGGCGCGCTGGTTCTACGACACCAATGCCAACGTCGACATGGTGTTCGTCCACAGCGCCCGTTCGCCGAAAGACATCATCTACCACCGCGAGCTGGaa                                                  >  1:190036/1‑145 (MQ=255)                                                                                                      ggTGCTGTACCTGTCGGGCGGCGTCGGTATTACCCCAGTGATGTCGATGGCGCGCTGGTTCTACGACACCAATGCCAACGTCGACATGGTGTTCGTCCACAGCGCCCGTTCGCCGAAAGACATCATCTACCACCGCGAGCTGGAACAGa                                              <  5:119276/149‑1 (MQ=255)                                                                                                        tGCTGTACCTGTCGGGCGGCGTCGGTATTACCCCAGTGATGTCGATGGCGCGCTGGTTCTACGac                                                                                                                                >  8:25598/1‑65 (MQ=255)                                                                                                        tGCTGTACCTGTCGGGCGGCGTCGGTATTACCCCAGTGATGTCGATGGCGCGCTGGTTCTACGac                                                                                                                                <  7:25598/65‑1 (MQ=255)                                                                                                        tGCTGTACCTGTCGGGCGGCGTCGGTATTACCCCAGTGATGTCGATGGCGCGCTGGTTCTACGACACCAATGCCAACGTCGACATGGTGTTCGTCCACAGCGCCCGTTCGCCGAAAGACATCATCTACCACTGCGAGCTGGAACAGATg                                            <  8:98421/149‑1 (MQ=255)                                                                                                               ccTGTCGGGCGGCGTCGGTATTACCCCAGTGATGTCGATGGCGCGCTGGTTCTACGACACCAATGCCAACGTCGACATGGTGTTCGTCCACAGCGCCCGTTCGCCGAAAGACATCATCTACCACCGCGAGCTGGAACAGATGGCGTcgc                                     >  4:46044/1‑149 (MQ=255)                                                                                                                 tGTCGGGCGGCGTCGGTATTACCCCAGTGATGTCGATGGCGCGCTGGTTCTACGACACCAATGCCAACGTCGACATGGTGTTCGTCCACAGCGCCCGTTCGCCGAAAGACATCATCTACCACCGCGAGCTGGAACAGATGGCGTcgcg                                    >  4:88147/1‑148 (MQ=255)                                                                                                                   tCGGGCGGCGTCGGTATTACCCCAGTGATGTCGATGGCGCGCTGGTTCTACGACACCAATGCCAACGTCGACATGGTGTTCGTCCACAGCGCCCGTTCGCCGAAAGACATCATCTACCACCGCGAGCTGGAACAGATGGCGTCGCGCAt                                 <  3:88147/149‑1 (MQ=255)                                                                                                                            gTCGGTATTACCCCAGTGATGTCGATGGCGCGCTGGTTCTACGACACCAATGCCAACGTCGACATGGTGTTCGTCCACAGCGCCAGTTCGCCGAAAGACATCATCTACCACAGCGAGCTGGAACAGATGGCGTCGCGCATCCCCAACt                         >  7:158825/1‑148 (MQ=255)                                                                                                                               ggTATTACCCCAGTGATGTCGATGGCGCGCTGGTTCTACGACACCAATGCCAACGTCGACATGGTGTTCGTCCACAGCGCCCGTTCGCCGAAAGACATCATCTACCACCGCGAGCTGGAACAGATgg                                           >  5:84144/1‑127 (MQ=255)                                                                                                                               ggTATTACCCCAGTGATGTCGATGGCGCGCTGGTTCTACGACACCAATGCCAACGTCGACATGGTGTTCGTCCACAGCGCCCGTTCGCCGAAAGACATCATCTACCACCGCGAGCTGGAACAGATgg                                           <  6:84144/127‑1 (MQ=255)                                                                                                                                gTATTACCCCAGTGATGTCGATGGCGCGCTGGTTCTACGACACCAATGCCAACGTCGACATGGTGTTCGTCCACAGCGCCCGTTCGCCGAAAGACATCATCTACCACCGCGAGCTGGAACAGATGGCGTCGCGCATCCCCAACTTCAGc                    >  4:112452/1‑149 (MQ=255)                                                                                                                                   ttACCCCAGTGATGTCGATGGCGCGCTGGTTCTACGACACCAATGCCAACGTCGACATGGTGTTCGTCCACAGCGCCCGTTCGCCGAAAGACATCATCTACCACCGCGAGCTGGAACAGATGGCGTCGCGCATCCCCAACTTCAGCCTg                 >  3:190699/1‑149 (MQ=255)                                                                                                                                   ttACCCCAGTGATGTCGATGGCGCGCTGGTTCTACGACACCAATGCCAACGTCGACATGGTGTTCGTCCACAGCGCCCGTTCGCCGAAAGACATCATCTACCACCGCGAGCTGGAACAGATGGCGTCGCGCATCCCCAACTTCAGCCTg                 <  6:276493/149‑1 (MQ=255)                                                                                                                                      ccccAGTGATGTCGATGGCGCGCTGGTTCTACGACACCAATGCCAACGTCGACATGGTGTTCGTCCACAGCGCCCGTTCGCCGAAAGACATCATCTACCACCGCGAGCTGGAACAGATGGCGTCGCGCATCCCCAACTTCAGCCTGca               <  5:96958/148‑1 (MQ=255)                                                                                                                                      ccccAGTGATGTCGATGGCGCGCTGGTTCTACGACACCAATGCCAACGTCGACATGGTGTTCGTCCACAGCGCCCGTTCGCCGAAAGACATCATCTACCACCGCGAGCTGGAACAGATGGCGTCGCGCATCCCCAACTTCAGCCTGca               >  6:78683/1‑148 (MQ=255)                                                                                                                                       cccAGTGATGTCGATGGCGCGCTGGTTCTACGACACCAATGCCAACGTCGACATGGTGTTCGTCCACAGCGCCCGTTCGCCGAAAGACATCATCTACCACCGCGAGCTGGAACAGATGGCGTCGCGCATc                                >  3:91323/1‑130 (MQ=255)                                                                                                                                       cccAGTGATGTCGATGGCGCGCTGGTTCTACGACACCAATGCCAACGTCGACATGGTGTTCGTCCACAGCGCCCGTTCGCCGAAAGACATCATCTACCACCGCGAGCTGGAACAGATGGCGTCGCGCATc                                <  4:91323/130‑1 (MQ=255)                                                                                                                                        ccAGTGATGTCGATGGCGCGCTGGTTCTACGACACCAATGCCAACGtcgacatcactggggtaataccgacgccgcccgacaggtacagcaccttgccagcagggaagtcgatggcgttgaacagccccaccgggccgtgcaccggcag            <  6:57753‑M2/149‑104 (MQ=255)                                                                                                                                        ccAGTGATGTCGATGGCGCGCTGGTTCTACGACACCAATGCCAACGTCGACATGGTGTTCGTCCACAGCGCCCGTTCGCCGAAAGACATCATCTACCACCGCGAGCTGGAACAGATGGCGTCGCGCATCCCCAACTTCAGCCTGCAcat            >  5:342380/1‑149 (MQ=255)                                                                                                                                         cAGTGATGTCGATGGCGCGCTGGTTCTACGACACCAATGCCAACGTCGACATGGTGTTCGTCCACAGCGCCCGTTCGCCGAAAGACATCATCTACCACCGCGAGc                                                       <  2:311168/105‑1 (MQ=255)                                                                                                                                         cAGTGATGTCGATGGCGCGCTGGTTCTACGACACCAATGCCAACGTCGACATGGTGTTCGTCCACAGCGCCCGTTCGCCGAAAGACATCATCTACCACCGCGAGCTGGAACAGATGGCGTCGCGCATCCCCAACTTc                       >  6:80850/1‑137 (MQ=255)                                                                                                                                         cAGTGATGTCGATGGCGCGCTGGTTCTACGACACCAATGCCAACGTCGACATGGTGTTCGTCCACAGCGCCCGTTCGCCGAAAGACATCATCTACCACCGCGAGCTGGAACAGATGGCGTCGCGCATCCCCAACTTc                       <  5:80850/137‑1 (MQ=255)                                                                                                                                         cAGTGATGTCGATGGCGCGCTGGTTCTACGACACCAATGCCAACGTCGACATGGTGTTCGTCCACAGCGCCCGTTCGCCGAAAGACAACATCTACCACCGCGAGc                                                       >  1:311168/1‑105 (MQ=255)                                                                                                                                          aGTGATGTCGATGGCGCGCTGGTTCTACGACACCAATGCCAACGtcgacatcactggggtaataccgacgccgcccgacaggtacagcaccttgccagcagggaagtcgatggcgttgaacagccccaccgggccgtgcaccggcagct          <  5:269992‑M2/149‑106 (MQ=255)                                                                                                                                          aGTGATGTCGATGGCGCGCTGGTTCTACGACACCAATGCCAACGTCGACATGGTGTTCGTCCACAGCGCCCGTTCGCCGAAAGACATCATCTACCACCGCGAGCTGGAACAGATGGCGTCGCGCATCCCCAACTTCAGCCTGCAcatca          <  5:78683/149‑1 (MQ=255)                                                                                                                                               tGTCGAcgttggaattggtgtcgtagaaccagcgcgccatcgacatcactggggtaataccgacgccgcacgacaggtacagcaccttgccagcagggaagtcgatggcgttgaacagccccaccgggccgtgcaccggcagctcggcg     <  6:119276‑M1/149‑144 (MQ=255)                                                                                                                                               tGTCGATGGCGCGCTGGTTCTACGACACCAATGCCAACGtcgacatcactggggtaataccgacgccgcccgacaggtacagcaccttgccagcagggaagtcgatggcgttgaacagccccaccgggccgtgcaccggcagctcggcg     >  6:269992‑M2/1‑39 (MQ=255)                                                                                                                                               tGTCGATGGCGCGCTGGTTCTACGACACCAATGCCAACGTCGACATGGTGTTCGTCCACAGCGCCCGTTCGCCGAAAGACATCATCTACCACCGCGAGCTGGAACAGATGGCGTCGCGCATCCCCAACTTCAGCCTGCACATCATTTGc     <  3:46044/149‑1 (MQ=255)                                                                                                                                                 tCGAcgttggcattggtgtcgtagaaccagcgcgccatcgacatcactggggtaataccgacgccgcccgacaggtacagcaccttgccagcagggaagtcgatggcgttgaacagccccaccgggccgtgcaccggcagctcggcgcc   >  7:116357‑M1/1‑4 (MQ=255)                                                                                                                                                   gATGGCGCGCTGGTTCTACGACACCAATGCCAACGTCGACATGGTGTTCGTCCACAGCGCCCGTTCGCCGAAAGACATCATCTACCACCGCGAGCTGGAACAGATGGCGTCGCGCATCCCCAACTTCAGCCTGCACATCATTTGCgag  >  6:161338/1‑148 (MQ=255)                                                                                                                                                    |                                                                                                                                                   CTGGTGTCGAACTTCCTGCATGACACCATGCACGAAGGCGCCGAGCTGCCGGTGCACGGCCCGGTGGGGCTGTTCAACGCCATCGACTTCCCTGCTGGCAAGGTGCTGTACCTGTCGGGCGGCGTCGGTATTACCCCAGTGATGTCGATGGCGCGCTGGTTCTACGACACCAATGCCAACGTCGACATGGTGTTCGTCCACAGCGCCCGTTCGCCGAAAGACATCATCTACCACCGCGAGCTGGAACAGATGGCGTCGCGCATCCCCAACTTCAGCCTGCACATCATTTGCGAG  >  NC_002947/379983‑380276

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.