| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 441840 = | 43 (0.730) | 4 (0.070) | 4/242 | NT | 9.6% | coding (721/1173 nt) | bioF | 8‑amino‑7‑oxononanoate synthase |
| ? | NC_002947 | 441900 = | 35 (0.630) | coding (781/1173 nt) | bioF | 8‑amino‑7‑oxononanoate synthase | |||||
CTCACGACGCCAGGTTTCGCGGCGCAACAGCTCCAGGCTCTTGAGTGTGGCGCAGGCCAGCGCCGGTGGCTGGCTGGTGGTGTAGATATAGGGGCGGGCGAACTGTACCAGCGCCTCGATCAGCGCCTCGCTGCCGGCAACAAAGGCGCCCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/441992‑441840‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcccgcCCCTATATCTACACCACCAGCCAGCCACCGGCGCTGGCCTGCGCCACACTCAAGAGCCTGGAGCTGTTGCGCCGCGAAACCTGGCGTCGTGAGCACCTGGCAGCCTTGATTCGCCAGTTCCGAGAAGGCGCGCAGCAGTTGGGG > NC_002947/441900‑442043 CTCACGACGCCAGGTTTCGCGGCGCAACAGCTCCAGGCTCTTGAGTGTGGCGCAGGCCAGCGCCGGTGGCTGGCTGGTGGTGTAGATATAGGGGCGGGCGAACTGTACCAGCGCCTCGATCAGCGCCTCGCTGCCGGCAACAAAGGCGC > 2:118421/1‑149 GACGCCAGGTTTCGCGGCGCAACAGCTCCAGGCTCTTGAGTGTGGCGCAGGCCAGCGCCGGTCGCTGGCTGGTGGTGTAGATATAGGGGCTGGCCAACTGTAAAATAGCCTCGATCAGCGCCTCGCTGCCGGCAACAAAGGCGCCCG > 8:125609/1‑147 GGGCGGGCGAACTGTACCAGCGCCTCGATCAGCGCCTCGCTGCCGGCAACAAAGGCGCCCGCCCCTATATCTACACCACCAGCCAGCCACCGGCGCTGGCCTGCGCCACACTCAAGAGCCTGGAGCTGTTGCGCCGCGAAACCTGGCGT > 8:326462/1‑149 CGGGCGAACTGTACCAGCGCCTCGATCAGCGCCTCGCTGCCGGCAACAAAGGCGCCCGCCCCTATATCTACACCACCAGCCAGCCACCGGCGCTGGCCTGCGCCACACTCAAGAGCCTGGAGCTGTTGCGCCGCGAAACCTGGCGTCGT > 8:16007/1‑149 GGCGAACTGTACCAGCGCCTCGATCAGCGCCTCGCTGCCGGCAACAAAGGCGCCCGCCCCTATATCTACACCACCAGCCAGCCACCGGCGCTGGCCTGCGCCACACTCAAGAGCCTGGAGCTGTTGCGCCGCGAAACCTGGCGTCGTGA < 7:326462/149‑1 CCGGCAACAAAGGCGCCCGCCCCTATATCTACACCACCAGCCAGCCACCGGCGCTGGCCTGCGCCACACTCAAGAGCCTGGAGCTGTTGCGCCGCGAAACCTGGCGTCGTGAGCACCTGGCAGCCTTGATTCGCCAGTTCCGAGAAGGC < 7:16007/149‑1 GCCCGCCCCTATATCTACACCACCAGCCAGCCACCGGCGCTGGCCTGCGCCACACTCAAGAGCCTGGAGCTGTTGCGCCGCGAAACCTGGCGTCGTGAGCACCTGGTAGCCTTGATTCGCCAGTTCCGAGAAGGCGCGCAGCAGTTGGG > 1:134776/1‑149 GCCCGCCCCTATATCTACACCACCAGCCAGCCACCGGCGCTGGCCTGCGCCACACTCAAGAGCCTGGAGCTGTTGCGCCGCGAAACCTGGCGTCGTGAGCACCTGGCAGCCTTGATTCGCCAGTTCCGAGAAGGCGCGCAGCAGTTGGG > 2:15613/1‑149 CCCGCCCCTATATCTACACCACCAGCCAGCCACCGGCGCTGGCCTGCGCCACACTCAAGAGCCTGGAGCTGTTGCGCCGCGAAACCTGGCGTCGTGAGCACCTGGCAGCCTTGATTCGCCAGTTCCGAGAAGGCGCGCAGCAGTTGGGG < 7:80239/149‑1 CTCACGACGCCAGGTTTCGCGGCGCAACAGCTCCAGGCTCTTGAGTGTGGCGCAGGCCAGCGCCGGTGGCTGGCTGGTGGTGTAGATATAGGGGCGGGCGAACTGTACCAGCGCCTCGATCAGCGCCTCGCTGCCGGCAACAAAGGCGCCCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/441992‑441840‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcccgcCCCTATATCTACACCACCAGCCAGCCACCGGCGCTGGCCTGCGCCACACTCAAGAGCCTGGAGCTGTTGCGCCGCGAAACCTGGCGTCGTGAGCACCTGGCAGCCTTGATTCGCCAGTTCCGAGAAGGCGCGCAGCAGTTGGGG > NC_002947/441900‑442043 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |