New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	441840 =	43 (0.730)	4 (0.070)	4/242	NT	9.6%	coding (721/1173 nt)	bioF	8‑amino‑7‑oxononanoate synthase
	?	NC_002947	441900 =	35 (0.630)					coding (781/1173 nt)	bioF	8‑amino‑7‑oxononanoate synthase

TGCCCGCGGTGCCTGGCTGATGGTCGACGACGCCCATGGCCTGGGCACCCTGGGTGCCAAAGGCGGCGGCATCGTCGAGCACTTTGGCCTGGGCGTGGATGATGTACCCGTGCTGATCGGCACGCTGGGCAAGGCTTGCGGCACT‑GCGGGCGCCTTTGTTGCCGGCAGCGAGGCGCTGATCGAGGCGCTGGTACAGTTCGCCCGCCCCTATATCTACACCACCAGCCAGCCACCGGCGCTGGCCTGCGCCACACTCAAGAGCCTGGAGCTGTTGCGCCGCGAAACCTGG  >  NC_002947/441695‑441983                                                                                                                                                   |                                                                                                                                                tGCCTGCGGTGCATGGCTGATTGTCGACGACGCCCTTGGCCTGGGCACCATGGGTGCAAAATGCGGCGGCATCGTCGAGCACTTTGGCCTGGGCGTGGATGATGTACCCGTGCTGATCGGCACGCTGGGCAAGGCTTGCGGCACT‑GCgg                                                                                                                                              <  4:40708/149‑1 (MQ=255) tGCCCGCGGTGCCTGGCTGATGGTCGACGACGCCCATGGCCTGGGCACCCTGGGTGCCAAAGGCGGCGGCATCGTCGAGCACTTTGGCCTGGGCGTGGATGATGTACCCGTGCTGATCGGCACGCTGGGCAAGGCTTGCGGCACT‑GCgg                                                                                                                                              <  1:133496/149‑1 (MQ=255)   ccccaactgctgcgcgccttctcggaactggcgaatcaaggctgccaggtgctcacgacgccaggtttcgcggcgcaacagctccaggctcttgagtgtggcgcaggccagcgccggtggctggctggtggtgtagatataggggcggg                                                                                                                                             <  7:80239‑M1/5‑1 (MQ=255)    cccaactgctgcgcgccttctcggaactggcgaatcaaggctgccaggtgctcacgacgccaggtttcgcggcgcaacagctccaggctcttgagtgtggcgcaggccagcgccggtggctggctggtggtgtagatataggggcgggc                                                                                                                                            >  2:15613‑M1/144‑149 (MQ=255)    cccaactgctgcgcgccttctcggaactggcgaatcaaggctaccaggtgctcacgacgccaggtttcgcggcgcaacagctccaggctcttgagtgtggcgcaggccagcgccggtggctggctggtggtgtagatataggggcgggc                                                                                                                                            >  1:134776‑M1/144‑149 (MQ=255)     cgcgGTGCCTGGCTGATGGTCGACGACGCCCATGGCCTGGGCACCCTGGGTGCCAAAGGCGGCGGCATCGTCGAGCACTTTGGCCTGGGCGTGGATGATGTAACCGTGCTGATCGGCACGCTGGGCAAGGCTTGCGGCACT‑GCGGgcgc                                                                                                                                          >  7:125609/1‑149 (MQ=255)                  gccttctcggaactggcgaatcaaggctgccaggtgctcacgacgccaggtttcgcggcgcaacagctccaggctcttgagtgtggcgcaggccagcgccggtggctggctggtggtgtagatatagggGCGGGCGCCTTTGTTGCCgg                                                                                                                              <  7:16007‑M1/20‑1 (MQ=255)                          gacgacGCCCATGGCCTGGGCACCCTGGGTGCCAAAGGCGGCGGCATCGTCGAGCACTTTGGCCTGGGCGTGGATGATGTACCCGTGCTGATCGGCACGCTGGGCAAGGCTTGCGGCACT‑GCGGGCGCCTTTGTTGCCGGCAGCGAGgc                                                                                                                     >  7:213525/1‑149 (MQ=255)                           acgacgCCCATGGCCTGGGCACCCTGGGTGCCAAAGGCGGCGGCATCGTCGAGCACTTTGGCCTGGGCGTGGATGATGTACCCGTGCTGATCGGCACGCTGGGCAAGGCTTGCGGCACT‑GCGGGCGCCTTTGTTGCCGGCAGCGAGgcg                                                                                                                    >  6:73498/1‑149 (MQ=255)                                gCCCATGGCCTGGGCACCCTGGGTGCCAAAGGCGGCGGCATCGTCGAGCACTTTGGCCTGGGCGTGGATGATGTACCCGTGCTGATCGGCACGCTGGGCAAGGCTTGCGGCACT‑GCGGGCGCCTTTGTTGCCGGCAGCGAGGCGCTGAt                                                                                                               >  4:138604/1‑149 (MQ=255)                                  ccATGGCCTGGGCACCCTGGGTGCCAAAGGCGGCGGCATCGTCGAGCACTTTGGCCTGGGCGTGGATGATGTACCCGTGCTGATCGGCACGCTGGGCAAGGCTTGCGGCACT‑GCGGGCGCCTTTGTTGCCGGCAGCGAGGCGCTGATc                                                                                                              >  3:155946/1‑148 (MQ=255)                                  ccATGGCCTGGGCACCCTGGGTGCCAAAGGCGGCGGCATCGTCGAGCACTTTGGCCTGGGCGTGGATGATGTACCCGTGCTGATCGGCACGCTGGGCAAGGCTTGCGGCACT‑GCGGGCGCCTTTGTTGCCGGCAGCGAGGCGCTGATc                                                                                                              >  4:212104/1‑148 (MQ=255)                                     tGGCCTGGGCACGCTGGGTGGCAAAGGCGGCGGCATCGTCGAGCACTTTGGCGTGGGCGTGGATGATGTACCCGTGCTGATCGGCACGCTGGGCAAGGCTTGCGGCACT‑GCGGGCGCCTTTGTTGCCGGCAGCGAGGCGCTGATCGAgg                                                                                                          <  5:309416/149‑1 (MQ=255)                                        ctttggCACCCAGGGTGCCAAAGGCGGCGGCATCGTCGAGCACTTTGGCCTGGGCGTGGATGATGTACCCGTGCTGATCGGCACGCTGGGCAAGGCTTGCGGCACT‑GCGGGCGCCTTTGTTGCCGGCAGCGAGGCGCTGATCGAGgcgc                                                                                                       >  2:323857/5‑149 (MQ=255)                                         cTGGGCACCCTGGGTGCCAAAGGCGGCGGCATCGTCGAGCACTTTGGCCTGGGCGTGGATGATGTACCCGTGCTGATCGGCACGCTGGGCAAGGCTTGCGGCACT‑GCGGGCGCCTTTGTTGCCGGCAGCGA‑GCGCTGATCGAGGCGCTg                                                                                                     <  2:242583/149‑1 (MQ=255)                                            ggCACCCTGGGTGCCAAAGGCGGCGGCATCGTCGAGCACTTTGGCCTGGGCGTGGATGATGTACCCGTGCTGATCGGCACGCTGGGCAAGGCTTGCGGCACTCGCGGGCGCCTTTGTTGCCGGCAGCGAGGCGCTGATCGAGGCGCTg                                                                                                     <  1:78633/148‑1 (MQ=255)                                             gCACCCTGGGTGCCAAAGGCGGCGGCATCGTCGAGCACTTTGGCCTGGGCGTGGATGATGTACCCGTGCTGATCGGCACGCTGGGCAAGGCTTGCGGCACT‑GCGGGCGCCTTTGTTGCCGGCAGCGAGGCGCTGATCGAGGCGCTGGTa                                                                                                  <  7:222141/149‑1 (MQ=255)                                             gCACCCTGGGTGCCAAAGGCGGCGGCATCGTCGAGCACTTTGGCCTGGGCGTGGATGATG‑ACCCGTGCTGATCGGCACGCTGGGCAAGGCTTGCGGCACT‑GCGGGCGCCTTTGTTGCCGGCAGCGAGGCGCTGATCGAGGCGCTGGTa                                                                                                  >  4:217855/1‑148 (MQ=255)                                                 ccTGGGTGCCAAAGGCGGCGGCATCGTCGAGCACTTTGGCCTGGGCGTGGATGATGTACCCGTGCTGATCGGCACGCTGGGCAAGGCTTGCGGCACT‑GCGGGCGCCTTTGTTGCCGGCAGCGAGGCGCTGATCGAGGCGCTGGTACAGt                                                                                              >  7:145019/1‑149 (MQ=255)                                                      gTGCCAAAGGCGGCGGCATCGTCGAGCACTTTGGCCTGGGCGTGGATGATGTACCCGTGCTGATCGGCACGCTGGGCAAGGCTTGCGGCACT‑GCGGGCGCCTTTGTTGCCGGCAGCGAGGCGCTGATCGAGGCGCTGGTACAGTTcgcc                                                                                         >  5:292830/1‑149 (MQ=255)                                                      gTGCCAAAGGCGGCGGCATCGTCGAGCACTTTGGCCTGGGCGTGGATGATGTACCCGGGCTGATCGGCACGCTGGGCAAGGCTTGCGGCACT‑GCGGGCGCCTTTGTTGCCGGCAGCGAGGCGCTGATCGAGGCGCTGGTACAGTTcgcc                                                                                         <  8:68753/149‑1 (MQ=255)                                                       tcacgacgccaggtttcgcggcgcaacagctccaggctcttgagtgtggcgcaggccagcgccggtggctggctggtggtgtagatatagggGCGGGCGCCTTTGTTGCCGGCAGCGAGGCGCTGATCGAGGCGCTGGTACAGTTcgcc                                                                                         <  7:326462‑M1/57‑1 (MQ=255)                                                         acgacgccaggtttcgcggcgcaacagctccaggctcttgagtgtggcgcaggccagcgccggtggctggctggtggtgtagatatagggGCGGGCGCCTTTGTTGCCGGCAGCGAGGCGCTGATCGAGGCGCTGGTACAGTTcgcccg                                                                                       >  8:16007‑M1/91‑149 (MQ=255)                                                          cAAAGGCGGCGGCATCGTCGAGCACTTTGGCCTGGGCGTGGATGATGTACCCGTGCTGATCGGCACGCTGGGCAAGGCTTGCGGCACT‑GCGGGCGCCTTTGTTGCCGGCAGCGAGGCGCTGATCGAGGCGCTGGTACAGTTcgcccgcc                                                                                     >  6:86034/1‑149 (MQ=255)                                                           aaaGGCGGCGGCATCGTCGAGCACTTTGGCCTGGGCGTGGATGATGTACCCGTGCTGATCGGCACGCTGGGCAAGGCTTGCGGCACT‑GCGGGCGCCTTTGTTGCCGGCAGCGAGGCGCTGATCGAGGCGCTGGTACAGTTCgcccgccc                                                                                    <  6:292830/149‑1 (MQ=255)                                                            acgccaggtttcgcggcgcaacagctccaggctcttgagtgtggcgcaggccagcgccggtggctggctggtggtgtagatatagggGCGGGCGCCTTTGTTGCCGGCAGCGAGGCGCTGATCGAGGCGCTGGTACAGTTCgcccgccc                                                                                    >  8:326462‑M1/88‑149 (MQ=255)                                                               gcggcggcATCGTCGAGCACTTTGGCCTGGGCGTGGATGATGTACCCGTGCTGATCGGCACGCTGGGCAAGGCTTGCGGCACT‑GCGGGCGCCTTTGTTGCCGGCAGCGAGGCGCTGATCGAGGCGCTGGTACAGTTCGCCCGCCCCtat                                                                                <  4:155946/149‑1 (MQ=255)                                                                cggcggcATCGTCGAGCACTTTGGCCTGGGCGTGGATGATG‑ACCCGTGCTGATCGGCACGCTGGGCAAGGCTTGCGGCACT‑GCGGGCGCCTTTGTTGCCGGCAGCGAGGCGCTGATCGAGGCGCTGGTACAGTTCGCCCGCCCCTatat                                                                              <  3:217855/149‑1 (MQ=255)                                                                        tcgtcgAGCACTTTGGCCTGGGCGTGGATGATGTACCCGTGCTGATCGGCACGCTGGGCAAGGCTTGCGGCACT‑GCGGGCGCCTTTGTTGCCGGCAGCGAGGCGCTGATCGAGGCGCTGGTACAGTTCGCCCGCCCCTATATCTacac                                                                        >  2:273659/1‑148 (MQ=255)                                                                                cACTTTGGCCTGGGCGTGGATGATGTACCCGTGCTGATCGGCACGCTGGGCAAGGCTTGCGGCACT‑GCGGGCGCCTTTGTTGCCGGCAGCGAGGCGCTGATCGAGGCGCTGGTACAGTTCgcccgccc                                                                                    >  3:200565/1‑128 (MQ=255)                                                                                cACTTTGGCCTGGGCGTGGATGATGTACCCGTGCTGATCGGCACGCTGGGCAAGGCTTGCGGCACT‑GCGGGCGCCTTTGTTGCCGGCAGCGAGGCGCTGATCGAGGCGCTGGTACAGTTCgcccgccc                                                                                    <  4:200565/128‑1 (MQ=255)                                                                                              cGTGGATGATGTACCCGTGCTGATCGGCACGCTGGGCAAGGCTTGCGGCACT‑GCGGGCGCCTTTGTTGCCGGCAGCGAGGCGCTGATCGAGGCGCTGGTACAGTTCGCCCGCCCCTATATCTACACCACCAGCCAGCCACCGGCGCTgg                                                 <  3:138604/149‑1 (MQ=255)                                                                                                tGGATGATGTACCCGTGCTGATCGGCACGCTGGGCAAGGCTTGCGGCACT‑GCGGGCGCCTTTGTTGCCGGCAGCGAGGCGCTGATCGAGGCGCTGGTACAGTTCGCCCGCCCCTATATCTACACCACCAGCCAGCCACCGGCGCTGGcc                                               <  1:323857/149‑1 (MQ=255)                                                                                                  gatgatGTACCCGTGCTGATCGGCACGCTGGGCAAGGCTTGCGGCACT‑GCGGGCGCCTTTGTTGCCGGCAGCGAGGCGCTGATCGAGGCGCTGGTACAGTTCGCCCGCCCCTATATCTACACCACCAGCCAGCCACCGGCGCTGGACTg                                             >  7:102728/1‑149 (MQ=255)                                                                                                        gTACCCGTGCTGATCGGCACGCTGGGCAAGGCTTGCGGCACT‑GCGGGCGCCTTTGTTGCCGGCAGCGAGGCGCTGATCGAGGCGCTGGTACAGTTCGCCCGCCCCTATATCTACACCACCAGCCAGCCACCGGCGCTGGCCTGCGCca                                        >  6:284785/1‑148 (MQ=255)                                                                                                        gTACCCGTGCTGATCGGCACGCTGGGCAAGGCTTGCGGCACT‑GCGGGCGCCTTTGTTGCCGGCAGCGAGGCGCTGATCGAGGCGCTGGTACAGTTCGCCCGCCCCTATATCTACACCACCAGCCAGCCACCGGCGCTGGCCTGCGCca                                        <  5:284785/148‑1 (MQ=255)                                                                                                        gTACCCGTGCTGATCGGCACGCTGGGCAAGGCTTGCGGCACT‑GCGGGCGCCTTTGTTGCCGGCAGCGAGGCGCTGATCGAGGCGCTGGTACAGTTCGACCGCCACTATATCTACACCACCAGCAAGCCAACGGCGCTGGCCTGCGAca                                        >  6:620/1‑148 (MQ=255)                                                                                                           cccGTGCTGATCGGCACGCTGGGCAAGGCTTGCGGCACT‑GCGGGCGCCTTTGTTGCCGGCAGCGAGGCGCTGATCGAGGCGCTGGTACAGTTCGCCCGCCCCTATATCTacac                                                                        <  8:73258/113‑1 (MQ=255)                                                                                                           cccGTGCTGATCGGCACGCTGGGCAAGGCTTGCGGCACT‑GCGGGCGCCTTTGTTGCCGGCAGCGAGGCGCTGATCGAGGCGCTGGTACAGTTCGCCCGCCCCTATATCTacac                                                                        >  7:73258/1‑113 (MQ=255)                                                                                                            ccGTGCTGATCGGCACGCTGGGCAAGGCTTGCGGCACT‑GCGGGCGCCTTTGTTGCCGGCAGCGAGGCGCTGATCAAGGCGCTGGTACAGAGCGCCCGCCCCTATATCTACCCCACCAGCCATCCACCGGCGCTGGCCTGCGACACACt                                    >  1:118421/1‑148 (MQ=255)                                                                                                                 cTGATCGGCACGCTGGGCAAGGCTTGCGGCACT‑GCGGGCGCCTTTGTTGCCGGCAGCGAGGCGCTGATCGAGGCGCTGGTACAGTTCGCCCGCCCCTATATCTACACCACCAGCCAGCCACCGGCGCTGGCCTGCGCCACACTCAaga                               <  5:73498/148‑1 (MQ=255)                                                                                                                  tGATCGGCACGCTGGGCAAGGCTTGCGGCACT‑GCGGGCGCCTTTGTTGCCGGCAGCGAGGCGCTGATCGAGGCGCTGGTACAGTTCGCCCGCCCCTATATCTACACCACCAGCCAGCCACCGGCGCTGGCCTGCGCCACACTCAAGAGc                             >  8:219574/1‑149 (MQ=255)                                                                                                                      cGGCACGCTGGGCAAGGCTTGCGGCACT‑GCGGGCGCCTTTGTTGCCGGCAGCGAGGCGCTGATCGAGGCGCTGGTACAGTTCGCCCGCCCCTATATCTACACCACCAGCCAGCCACCGGCGCTGGCCTGCGCCACACTCAAGAGCCTg                          >  7:298669/1‑148 (MQ=255)                                                                                                                        gCACGCTGGGCAAGGCTTGCGGCACT‑GCGGGCGCCTTTGTTGCCGGCAGCGAGGCGCTGATCGAGGCGCTGGTACAGTTCGCCTGCCCCTATATCTACACCACCAGCCAGCCACCGGCGCTGGCCTGCGCCACACTCAAGGGCCTGGAg                       >  8:144750/1‑149 (MQ=255)                                                                                                                            gCTGGGCAAGGCTTGCGGCACT‑GCGGGCGCCTTTGTTGCCGGCAGCGAGGCGCTGATCGAGGCGCTGGTACAGTTCGCCCGCCCCTATATCTACACCACCAGCCAGCCACCGGCGCTGGCCTGCGCCACACTCAAGAGCCTGGAGCTGt                   <  5:86034/149‑1 (MQ=255)                                                                                                                                ggCAAGGCTTGCGGCACT‑GCGGGCGCCTTTGTTGCCGGCAGCGAGGCGCTGATCGAGGCGCTGGTACAGTTCGCCCGCCCCTATATCTACACCACCAGCCAGCCACCGGCGCTGGCCTGCGCCACACTCAAGAGCCTGGAGCTGTTgcg               >  2:116093/1‑149 (MQ=255)                                                                                                                                       cTTGCGGCACT‑GCGGGCGCCTTTGTTGCCGGCAGCGAGGCGCTGATCGAGGCGCTGGTACAGTTCGCCCGCCCCTATATCTACACCACCAGCCAGCCACCGGCGCTGGCCTGCGCCACACTCAAGAGCCTGGAGCTGTTGCGCCGCGaa        <  7:219574/149‑1 (MQ=255)                                                                                                                                        ttGCGGCACT‑GCGGGCGCCTTTGTTGCCGGCAGCGAGGCGCTGATCGAGGCGCTGGTACAGTTCGCCCGCCCCTATATCTACACCACCAGCCAGCCACCGGCGCTGGCCTGCGCCACACTCAAGAGCCTGGAGCTGTTGCGCCGCGaaa       >  5:353587/1‑149 (MQ=255)                                                                                                                                        ttGCGGCACT‑GCGGGCGCCTTTGTTGCCGGCAGCGAGGCGCTGATCGAGGCGCTGGTACAGTTCGACCGCCCCTATATCTACACCACCAGCCAGCCACCTGCGATGGCCTGCGCCACACTCCAGAGCCTGGAGCTGTTGCGCCTCGaaa       >  5:313625/1‑149 (MQ=255)                                                                                                                                            ggCTCT‑GCGGGCTCCTTTGTTGCCGGCAGCGAGGCGCTGATCGAGGCGCGGGTACAGTTCGCCCGCCCCTATATCTACACCACCAGCCAGCCACCGGCGCTGGCCTGCGCCACACTCAAGAGCCTGGAGCTGTTGCGCCGCGAAACCTg   <  5:620/149‑1 (MQ=255)                                                                                                                                            ggCACT‑GCGGGCGCCTTTGTTGCCGGCAGCGAGGCGCTGATCGAGGCGCTGTTACAGTTCGCGCGCCCCTATATCTACACCACCAGCCAGCCACCGGCGCTGGACTGCGCCACACTCAAGAGCCTGGAGCTGTTGCGCCGCGAAACCTg   <  8:102728/149‑1 (MQ=255)                                                                                                                                            ggCACT‑GCGGGCGCCTTTGTTGCCGGCAGCGAGGCGCTGATCGAGGCGCTGGTACAGTTCGCCCGCCCCTATATCTACACCACCAGCCAGCCACCGGCGCTGGCCTGCGCCACACTCAAGAGCCTGGAGCTGTTGCGCCGCGAAACCTg   <  8:145019/149‑1 (MQ=255)                                                                                                                                             gCACT‑GCGGGCGCCTTTGTTGCCGGCAGCGAGGCGCTGATCGAGGCGCTGGTACAGTTCGCCCGCCCCTATATCTACACCACCAGCCAGCCACCGGCGCTGGCCTGCGCCACACTCAAGAGCCTGGAGCTGTTGCGCCGCGAAACCTgg  <  3:212104/149‑1 (MQ=255)                                                                                                                                                   |                                                                                                                                                TGCCCGCGGTGCCTGGCTGATGGTCGACGACGCCCATGGCCTGGGCACCCTGGGTGCCAAAGGCGGCGGCATCGTCGAGCACTTTGGCCTGGGCGTGGATGATGTACCCGTGCTGATCGGCACGCTGGGCAAGGCTTGCGGCACT‑GCGGGCGCCTTTGTTGCCGGCAGCGAGGCGCTGATCGAGGCGCTGGTACAGTTCGCCCGCCCCTATATCTACACCACCAGCCAGCCACCGGCGCTGGCCTGCGCCACACTCAAGAGCCTGGAGCTGTTGCGCCGCGAAACCTGG  >  NC_002947/441695‑441983

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.