New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	441840 =	43 (0.730)	4 (0.070)	4/242	NT	9.6%	coding (721/1173 nt)	bioF	8‑amino‑7‑oxononanoate synthase
	?	NC_002947	441900 =	35 (0.630)					coding (781/1173 nt)	bioF	8‑amino‑7‑oxononanoate synthase

CAAAGGCGGCGGCATCGTCGAGCACTTTGGCCTGGGCGTGGATGATGTACCCGTGCTGATCGGCACGCTGGGCAAGGCTTGCGGCACTGCGGGCGCCTTTGTTGCCGGCAGCGAGGCGCTGATCGAGGCGCTGGTACAGTTCGCCCGCCCCTATATCTACACCACCAGCCAGCCACCGGCGCTGGCCTGCGCCACACTCAAGAGCCTGGAGCTGTTGCGCCGCGAAACCTGGCGTCGTGAGCACCTGGCAGCCTTGATTCGCCAGTTCCGAGAAGGCGCGCAGCAGTTGGGGCTG  >  NC_002947/441752‑442046                                                                                                                                                     |                                                                                                                                                   cAAAGGCGGCGGCATCGTCGAGCACTTTGGCCTGGGCGTGGATGATGTACCCGTGCTGATCGGCACGCTGGGCAAGGCTTGCGGCACTGCGGGCGCCTTTGTTGCCGGCAGCGAGGCGCTGATCGAGGCGCTGGTACAGTTcgcccgcc                                                                                                                                                    >  6:86034/1‑149 (MQ=255)  acgccaggtttcgcggcgcaacagctccaggctcttgagtgtggcgcaggccagcgccggtggctggctggtggtgtagatatagggGCGGGCGCCTTTGTTGCCGGCAGCGAGGCGCTGATCGAGGCGCTGGTACAGTTCgcccgccc                                                                                                                                                   >  8:326462‑M1/88‑149 (MQ=255)  aaaGGCGGCGGCATCGTCGAGCACTTTGGCCTGGGCGTGGATGATGTACCCGTGCTGATCGGCACGCTGGGCAAGGCTTGCGGCACTGCGGGCGCCTTTGTTGCCGGCAGCGAGGCGCTGATCGAGGCGCTGGTACAGTTCgcccgccc                                                                                                                                                   <  6:292830/149‑1 (MQ=255)      gcggcggcATCGTCGAGCACTTTGGCCTGGGCGTGGATGATGTACCCGTGCTGATCGGCACGCTGGGCAAGGCTTGCGGCACTGCGGGCGCCTTTGTTGCCGGCAGCGAGGCGCTGATCGAGGCGCTGGTACAGTTCGCCCGCCCCtat                                                                                                                                               <  4:155946/149‑1 (MQ=255)       cggcggcATCGTCGAGCACTTTGGCCTGGGCGTGGATGATG‑ACCCGTGCTGATCGGCACGCTGGGCAAGGCTTGCGGCACTGCGGGCGCCTTTGTTGCCGGCAGCGAGGCGCTGATCGAGGCGCTGGTACAGTTCGCCCGCCCCTatat                                                                                                                                             <  3:217855/149‑1 (MQ=255)               tcgtcgAGCACTTTGGCCTGGGCGTGGATGATGTACCCGTGCTGATCGGCACGCTGGGCAAGGCTTGCGGCACTGCGGGCGCCTTTGTTGCCGGCAGCGAGGCGCTGATCGAGGCGCTGGTACAGTTCGCCCGCCCCTATATCTacac                                                                                                                                       >  2:273659/1‑148 (MQ=255)                       cACTTTGGCCTGGGCGTGGATGATGTACCCGTGCTGATCGGCACGCTGGGCAAGGCTTGCGGCACTGCGGGCGCCTTTGTTGCCGGCAGCGAGGCGCTGATCGAGGCGCTGGTACAGTTCgcccgccc                                                                                                                                                   >  3:200565/1‑128 (MQ=255)                       cACTTTGGCCTGGGCGTGGATGATGTACCCGTGCTGATCGGCACGCTGGGCAAGGCTTGCGGCACTGCGGGCGCCTTTGTTGCCGGCAGCGAGGCGCTGATCGAGGCGCTGGTACAGTTCgcccgccc                                                                                                                                                   <  4:200565/128‑1 (MQ=255)                                     cGTGGATGATGTACCCGTGCTGATCGGCACGCTGGGCAAGGCTTGCGGCACTGCGGGCGCCTTTGTTGCCGGCAGCGAGGCGCTGATCGAGGCGCTGGTACAGTTCGCCCGCCCCTATATCTACACCACCAGCCAGCCACCGGCGCTgg                                                                                                                <  3:138604/149‑1 (MQ=255)                                       tGGATGATGTACCCGTGCTGATCGGCACGCTGGGCAAGGCTTGCGGCACTGCGGGCGCCTTTGTTGCCGGCAGCGAGGCGCTGATCGAGGCGCTGGTACAGTTCGCCCGCCCCTATATCTACACCACCAGCCAGCCACCGGCGCTGGcc                                                                                                              <  1:323857/149‑1 (MQ=255)                                         gatgatGTACCCGTGCTGATCGGCACGCTGGGCAAGGCTTGCGGCACTGCGGGCGCCTTTGTTGCCGGCAGCGAGGCGCTGATCGAGGCGCTGGTACAGTTCGCCCGCCCCTATATCTACACCACCAGCCAGCCACCGGCGCTGGACTg                                                                                                            >  7:102728/1‑149 (MQ=255)                                               gTACCCGTGCTGATCGGCACGCTGGGCAAGGCTTGCGGCACTGCGGGCGCCTTTGTTGCCGGCAGCGAGGCGCTGATCGAGGCGCTGGTACAGTTCGCCCGCCCCTATATCTACACCACCAGCCAGCCACCGGCGCTGGCCTGCGCca                                                                                                       >  6:284785/1‑148 (MQ=255)                                               gTACCCGTGCTGATCGGCACGCTGGGCAAGGCTTGCGGCACTGCGGGCGCCTTTGTTGCCGGCAGCGAGGCGCTGATCGAGGCGCTGGTACAGTTCGCCCGCCCCTATATCTACACCACCAGCCAGCCACCGGCGCTGGCCTGCGCca                                                                                                       <  5:284785/148‑1 (MQ=255)                                               gTACCCGTGCTGATCGGCACGCTGGGCAAGGCTTGCGGCACTGCGGGCGCCTTTGTTGCCGGCAGCGAGGCGCTGATCGAGGCGCTGGTACAGTTCGACCGCCACTATATCTACACCACCAGCAAGCCAACGGCGCTGGCCTGCGAca                                                                                                       >  6:620/1‑148 (MQ=255)                                                  cccGTGCTGATCGGCACGCTGGGCAAGGCTTGCGGCACTGCGGGCGCCTTTGTTGCCGGCAGCGAGGCGCTGATCGAGGCGCTGGTACAGTTCGCCCGCCCCTATATCTacac                                                                                                                                       >  7:73258/1‑113 (MQ=255)                                                  cccGTGCTGATCGGCACGCTGGGCAAGGCTTGCGGCACTGCGGGCGCCTTTGTTGCCGGCAGCGAGGCGCTGATCGAGGCGCTGGTACAGTTCGCCCGCCCCTATATCTacac                                                                                                                                       <  8:73258/113‑1 (MQ=255)                                                   ccGTGCTGATCGGCACGCTGGGCAAGGCTTGCGGCACTGCGGGCGCCTTTGTTGCCGGCAGCGAGGCGCTGATCAAGGCGCTGGTACAGAGCGCCCGCCCCTATATCTACCCCACCAGCCATCCACCGGCGCTGGCCTGCGACACACt                                                                                                   >  1:118421/1‑148 (MQ=255)                                                        cTGATCGGCACGCTGGGCAAGGCTTGCGGCACTGCGGGCGCCTTTGTTGCCGGCAGCGAGGCGCTGATCGAGGCGCTGGTACAGTTCGCCCGCCCCTATATCTACACCACCAGCCAGCCACCGGCGCTGGCCTGCGCCACACTCAaga                                                                                              <  5:73498/148‑1 (MQ=255)                                                         tGATCGGCACGCTGGGCAAGGCTTGCGGCACTGCGGGCGCCTTTGTTGCCGGCAGCGAGGCGCTGATCGAGGCGCTGGTACAGTTCGCCCGCCCCTATATCTACACCACCAGCCAGCCACCGGCGCTGGCCTGCGCCACACTCAAGAGc                                                                                            >  8:219574/1‑149 (MQ=255)                                                             cGGCACGCTGGGCAAGGCTTGCGGCACTGCGGGCGCCTTTGTTGCCGGCAGCGAGGCGCTGATCGAGGCGCTGGTACAGTTCGCCCGCCCCTATATCTACACCACCAGCCAGCCACCGGCGCTGGCCTGCGCCACACTCAAGAGCCTg                                                                                         >  7:298669/1‑148 (MQ=255)                                                               gCACGCTGGGCAAGGCTTGCGGCACTGCGGGCGCCTTTGTTGCCGGCAGCGAGGCGCTGATCGAGGCGCTGGTACAGTTCGCCTGCCCCTATATCTACACCACCAGCCAGCCACCGGCGCTGGCCTGCGCCACACTCAAGGGCCTGGAg                                                                                      >  8:144750/1‑149 (MQ=255)                                                                   gCTGGGCAAGGCTTGCGGCACTGCGGGCGCCTTTGTTGCCGGCAGCGAGGCGCTGATCGAGGCGCTGGTACAGTTCGCCCGCCCCTATATCTACACCACCAGCCAGCCACCGGCGCTGGCCTGCGCCACACTCAAGAGCCTGGAGCTGt                                                                                  <  5:86034/149‑1 (MQ=255)                                                                       ggCAAGGCTTGCGGCACTGCGGGCGCCTTTGTTGCCGGCAGCGAGGCGCTGATCGAGGCGCTGGTACAGTTCGCCCGCCCCTATATCTACACCACCAGCCAGCCACCGGCGCTGGCCTGCGCCACACTCAAGAGCCTGGAGCTGTTgcg                                                                              >  2:116093/1‑149 (MQ=255)                                                                              cTTGCGGCACTGCGGGCGCCTTTGTTGCCGGCAGCGAGGCGCTGATCGAGGCGCTGGTACAGTTCGCCCGCCCCTATATCTACACCACCAGCCAGCCACCGGCGCTGGCCTGCGCCACACTCAAGAGCCTGGAGCTGTTGCGCCGCGaa                                                                       <  7:219574/149‑1 (MQ=255)                                                                               ttGCGGCACTGCGGGCGCCTTTGTTGCCGGCAGCGAGGCGCTGATCGAGGCGCTGGTACAGTTCGCCCGCCCCTATATCTACACCACCAGCCAGCCACCGGCGCTGGCCTGCGCCACACTCAAGAGCCTGGAGCTGTTGCGCCGCGaaa                                                                      >  5:353587/1‑149 (MQ=255)                                                                               ttGCGGCACTGCGGGCGCCTTTGTTGCCGGCAGCGAGGCGCTGATCGAGGCGCTGGTACAGTTCGACCGCCCCTATATCTACACCACCAGCCAGCCACCTGCGATGGCCTGCGCCACACTCCAGAGCCTGGAGCTGTTGCGCCTCGaaa                                                                      >  5:313625/1‑149 (MQ=255)                                                                                   ggCTCTGCGGGCTCCTTTGTTGCCGGCAGCGAGGCGCTGATCGAGGCGCGGGTACAGTTCGCCCGCCCCTATATCTACACCACCAGCCAGCCACCGGCGCTGGCCTGCGCCACACTCAAGAGCCTGGAGCTGTTGCGCCGCGAAACCTg                                                                  <  5:620/149‑1 (MQ=255)                                                                                   ggCACTGCGGGCGCCTTTGTTGCCGGCAGCGAGGCGCTGATCGAGGCGCTGTTACAGTTCGCGCGCCCCTATATCTACACCACCAGCCAGCCACCGGCGCTGGACTGCGCCACACTCAAGAGCCTGGAGCTGTTGCGCCGCGAAACCTg                                                                  <  8:102728/149‑1 (MQ=255)                                                                                   ggCACTGCGGGCGCCTTTGTTGCCGGCAGCGAGGCGCTGATCGAGGCGCTGGTACAGTTCGCCCGCCCCTATATCTACACCACCAGCCAGCCACCGGCGCTGGCCTGCGCCACACTCAAGAGCCTGGAGCTGTTGCGCCGCGAAACCTg                                                                  <  8:145019/149‑1 (MQ=255)                                                                                    gCACTGCGGGCGCCTTTGTTGCCGGCAGCGAGGCGCTGATCGAGGCGCTGGTACAGTTCGCCCGCCCCTATATCTACACCACCAGCCAGCCACCGGCGCTGGCCTGCGCCACACTCAAGAGCCTGGAGCTGTTGCGCCGCGAAACCTgg                                                                 <  3:212104/149‑1 (MQ=255)                                                                                       gggcgggcgaactgtaccagcgcctcgatcagcgcctcgctgccggcaacaaaggcgcccgcCCCTATATCTACACCACCAGCCAGCCACCGGCGCTGGCCTGCGCCACACTCAAGAGCCTGGAGCTGTTGCGCCGCGAAACCTGGcgt                                                              >  8:326462‑M2/63‑149 (MQ=255)                                                                                          cgggcgaactgtaccagcgcctcgatcagcgcctcgctgccggcaacaaaggcgcccgcCCCTATATCTACACCACCAGCCAGCCACCGGCGCTGGCCTGCGCCACACTCAAGAGCCTGGAGCTGTTGCGCCGCGAAACCTGGcgtcgt                                                           >  8:16007‑M2/60‑149 (MQ=255)                                                                                          CGGGCGCCTTTGTTGCCGGCAGCGAGGCGCTGATCGAGGCTATTTTACAGTTGGCCAGCCCCTATATCTACACCACCAGCCAGCGACCGGCGCTGGCCTGCGCCACACTCAAGAGCCTGGAGCTGTTGCGCCGCGAAACCTGGcgtc                                                             >  8:125609‑M1/1‑147 (MQ=255)                                                                                            ggcgaactgtaccagcgcctcgatcagcgcctcgctgccggcaacaaaggcgcccgcCCCTATATCTACACCACCAGCCAGCCACCGGCGCTGGCCTGCGCCACACTCAAGAGCCTGGAGCTGTTGCGCCGCGAAACCTGGCGTCGTGa                                                         <  7:326462‑M2/92‑1 (MQ=255)                                                                                             GCGCCTTTGTTGCCGGCAGCGAGGCGCTGATCGAGGCGCTGGTACAGTTCGCCCGCCCCTATATCTACACCACCAGCCAGCCACCGGCGCTGGCCTGCGCCACACTCAAGAGCCTGGAGCTGTTGCGCCGCGAAACCTGGCGTCGTGAg                                                        >  2:118421‑M1/1‑149 (MQ=255)                                                                                                ccTTTGTTGCCGGCAGCGAGGCGCTGATCGATTTTATTTTACAGTTCGCGAGCACCTATATCTACACCACCAGCCAGCCACCGGCGCTGGCCTGCGCCACACTCAAGAGCCTGGAGCTGTTGCGCCGCGAAACCTGGCGTCGTGAGCAc                                                     <  8:213525/149‑1 (MQ=255)                                                                                                      ttgCCGGCAGCGAGGCGCTGATCGAGGCGCTGGTACAGTTCGCCCGCCCCTATATCTACACCACCAGCCAGCCACCGGCGCTGGCCTGCGCCACACTCAAGAGCCTGGAGCTGTTGCGCCGCGAAACCTGGCGTCGTGAGCACCTgg                                                 >  6:330231/1‑147 (MQ=255)                                                                                                      ttgCCGGCAGCGAGGCGCTGATCGAGGCGCTGGTACAGTTCGCCCGCCCCTATATCTACACCACCAGCCAGCCACCGGCGCTGGCCTGCGCCACACTCAAGAGCCTGGAGCTGTTGCGCCGCGAAACCTGGCGTCGTGAGCACCTGGCa                                               >  8:80239/1‑149 (MQ=255)                                                                                                        gCCGGCAGCGAGGCGCTGATCGCGGCGCTGGTACAGTTCGCCCGCCCCTATATCTACACCACCAGCCCGCCCCCGGCGCTGGCCTGCGCCACACTCAAGAGCCTGGAGCTGTTGCGCCGCGAAACCTGGCGTCGTGAGCACCTGGCAGc                                             >  3:367971/1‑149 (MQ=255)                                                                                                          cGGCAGCGAGGCGCTGATTGATGAGATGTTTCATTTCGCCAGCCCCTATATCTACACCACCAGCCAGCCACCGGCGCTGGCCTGCGCCACACTCAAGAGCCTGGAGCTGTTGCGCCGCGAAACCTGGCGTCGTGAGCACCTGGCAGCCt                                           <  6:43097/149‑1 (MQ=255)                                                                                                           ggCAGCGAGGCGCTGATCGAGGCGCTGGTACAGTTCGCCCGCCCCTATATCTACACCACCAGCCAGCCACCGGCGCTGGCCTGCGCCACACTCAAGAGCCTGGAGCTGTTGCGCCGCGAAACCTGGCGTCGTGAGCACCTGGCAGCCtt                                          <  1:273659/149‑1 (MQ=255)                                                                                                                    gcgcTGATCGAGGCGCTGGTACAGTTCGCCCGCCCCTATATCTACACCACCAGCCAGCCACCGGCGCTGGCCTGCGCCACACTCAAGAGCCTGGAGCTGTTGCGCCGCGAAACCTGGCGTCGTGAGCACCTGGCAGCCTTGATTCGCCa                                 <  1:116093/149‑1 (MQ=255)                                                                                                                          aTCGAGGCGCTGGTACAGTTCGCCTGCCCCTATATCTACACCACCAGCCAGCCACCGGCGCTGGCCTGCGCCACACTCAAGGGCCTGGAGCTGTTGCGCCGCGAAACCTGGCGTCGTGAGCACCTGGCAGCCTTGATTCGCCAGTTc                             <  7:144750/147‑1 (MQ=255)                                                                                                                          aTCGAGGCGCTGGTACAGTTCGCCCGCCCCTATATCTACACCACCAGCCAGCCACCGGCGCTGGCCTGCGCCACACTCAAGAGCCTGGAGCTGTTGCGCCGCGAAACCTGGCGTCGTGAGCACCTGGCAGCCTTGATTCGCCAGTTc                             <  8:298669/147‑1 (MQ=255)                                                                                                                                 ccggcaacaaaggcgcccgcCCCTATATCTACACCACCAGCCAGCCACCGGCGCTGGCCTGCGCCACACTCAAGAGCCTGGAGCTGTTGCGCCGCGAAACCTGGCGTCGTGAGCACCTGGCAGCCTTGATTCGCCAGTTCCGAGAAGgc                    <  7:16007‑M2/129‑1 (MQ=255)                                                                                                                                  gcTGGTACAGTTCGCCCGCCCCTATATCTACACCACCAGCCAGCCACCGGCGCTGGCCTGCGCCACACTCAAGAGCCTGGAGCTGTTGCGCCGCGAAACCTGGCGTCGTGAGCACCTGGCAGCCTTGATTCGCCAGTTCCGAGAAGgcg                   >  7:271415/1‑149 (MQ=255)                                                                                                                                            ttCGCCCGCCCCTATATCTACACCACCAGCCAGCCACCGGCGCTGGCCTGCGCCACACTCAAGAGCCTGGAGCTGTTGCGCCGCGAAACCTGGCGTCGTGAGCACCTGGCAGCCTTGATTCGCCa                                 <  6:11992/125‑1 (MQ=255)                                                                                                                                            ttCGCCCGCCCCTATATCTACACCACCAGCCAGCCACCGGCGCTGGCCTGCGCCACACTCAAGAGCCTGGAGCTGTTGCGCCGCGAAACCTGGCGTCGTGAGCACCTGGCAGCCTTGATTCGCCa                                 >  5:11992/1‑125 (MQ=255)                                                                                                                                               gcccgcCCCTATATCTACACCACCAGCCAGCCACCGGCGCTGGCCTGCGCCACACTCAAGAGCCTGGAGCTGTTGCGCCGCGAAACCTGGCGTCGTGAGCACCTGGTAGCCTTGATTCGCCAGTTCCGAGAAGGCGCGCAGCAGTTggg      >  1:134776‑M2/7‑149 (MQ=255)                                                                                                                                               gcccgcCCCTATATCTACACCACCAGCCAGCCACCGGCGCTGGCCTGCGCCACACTCAAGAGCCTGGAGCTGTTGCGCCGCGAAACCTGGCGTCGTGAGCACCTGGCAGCCTTGATTCGCCAGTTCCGAGAAGGCGCGCAGCAGTTggg      >  2:15613‑M2/7‑149 (MQ=255)                                                                                                                                                cccgcCCCTATATCTACACCACCAGCCAGCCACCGGCGCTGGCCTGCGCCACACTCAAGAGCCTGGAGCTGTTGCGCCGCGAAACCTGGCGTCGTGAGCACCTGGCAGCCTTGATTCGCCAGTTCCGAGAAGGCGCGCAGCAGTTgggg     <  7:80239‑M2/144‑1 (MQ=255)                                                                                                                                                     cccTATATCTACACCACCAGCCAGCCACCGGCGCTGGCCTGCGCCACACTCAAGAGCCTGGAGCTGTTGCGCCGCGAAACCTGGCGTCGTGAGCACCTGGCAGCCTTGATTCGCCAGTTCCGAGAAGGCGCGCAGCAGTTGGGGCTg  >  8:273758/1‑147 (MQ=255)                                                                                                                                                     |                                                                                                                                                   CAAAGGCGGCGGCATCGTCGAGCACTTTGGCCTGGGCGTGGATGATGTACCCGTGCTGATCGGCACGCTGGGCAAGGCTTGCGGCACTGCGGGCGCCTTTGTTGCCGGCAGCGAGGCGCTGATCGAGGCGCTGGTACAGTTCGCCCGCCCCTATATCTACACCACCAGCCAGCCACCGGCGCTGGCCTGCGCCACACTCAAGAGCCTGGAGCTGTTGCGCCGCGAAACCTGGCGTCGTGAGCACCTGGCAGCCTTGATTCGCCAGTTCCGAGAAGGCGCGCAGCAGTTGGGGCTG  >  NC_002947/441752‑442046

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.