New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 811460	44 (0.740)	3 (0.050)	3/244	NT	6.1%	coding (792/918 nt)	PP_0698	LysR family transcriptional regulator
	?	NC_002947	= 811486	51 (0.910)					coding (766/918 nt)	PP_0698	LysR family transcriptional regulator

GGGTGGTGATGGCGGTGCGGGGGCGTCGTTCTGTATCAACCCCAAATGAGCCAGGCACTTCCGGCATTCGTCCATTATCCACTCGGCGAAGCGCTGGCGCTTGCCGCTGTCGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/811346‑811460 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcggccTACCACCTGCTCAGCCCGCAGCCTCTGGCCGACAGCGGCAAGCGCCAGCGCTTCGCCGAGTGGATAATGGACGAATGCCGGAAGTGCCTGGCTCATTTGGGGTTGATACAGAACGACGCCCCCGCACCGCCATCACCACCC  <  NC_002947/811486‑811346                                                                                                                                                                                                                                                                  GGGTGGTGATGGCGGTGCGGGGGCGTCGTTCTGTATCAACCCCAAATGAGCCAGGCACTTCCGGCATTCGTCCATTATCCACTCGGCGAAGCGCTGGCGCTTGCCGCTGTCGGCCTACCACCTGCTCAGCCCGCAGCCTCTGGCCGA                                                                                                               <  5:99121/147‑1   GTGGTGATGGCGGTGCGGGGGCGTCGTTCTGTATCAACCCCAAATGAGCCAGGCACTTCCGGCATTCGTCCATTATCCACTCGGCGAAGCGCTGGCGCTTGCCGCTGTCGGCCTACCACCTGCTCAGCCCGCAGCCTCTGGCCGACAGC                                                                                                           >  8:78969/1‑149    TGGTGATGGCGGTGCGGGGGCGTCGTTCTGTATCAACCCCAAATGAGCCAGGCACTTCCGGCATTCGTCCATTATCCACTCGGCGAAGCGCTGGCGCTTGCCGCTGTCGGCCTACCACCTGCTCAGCCCGCAGCCTCTGGCCGACAGCG                                                                                                          <  7:78969/149‑1                                                                                                              TCGGCCTACCACCTGCTCAGCCCGCAGCCTCTGGCCGACAGCGGCAAGCGCCAGCGCTTCGCCGAGTGGATAATGGACGAATGCCGGAAGTGCCTGGCTCATTTGGGGTTGATACAGAACGACGCCCCCGCACCGCCATCACCACCC  >  6:63911/1‑147                                                                                                                                                                                                                                                                  GGGTGGTGATGGCGGTGCGGGGGCGTCGTTCTGTATCAACCCCAAATGAGCCAGGCACTTCCGGCATTCGTCCATTATCCACTCGGCGAAGCGCTGGCGCTTGCCGCTGTCGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/811346‑811460 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcggccTACCACCTGCTCAGCCCGCAGCCTCTGGCCGACAGCGGCAAGCGCCAGCGCTTCGCCGAGTGGATAATGGACGAATGCCGGAAGTGCCTGGCTCATTTGGGGTTGATACAGAACGACGCCCCCGCACCGCCATCACCACCC  <  NC_002947/811486‑811346

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.