New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 831591 | 72 (1.220) | 4 (0.070) | 4/250 | NT | 5.3% | coding (865/1515 nt) | PP_0715 | outer membrane efflux protein |
? | NC_002947 | = 831649 | 74 (1.280) | coding (923/1515 nt) | PP_0715 | outer membrane efflux protein |
GAGAACCAGCTCAACGCCCTGCGCAACATACTGTGCTCGCTGCTTGGCCGCCCGCCCGGGCCGCTGCCGCAGCTGGAGGCCGGGCATGGCCAACTGCCCTTGCCCAACCGGGCAGTGTTGCAGGATGTACCTGCCAGCCTGCTGCAGCGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/831441‑831591 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccACCCCGACCAGCGCCGACTGCGCCGCCACTGCCTGCTCGGCGGCGCGGATGTCCGGGCGGCGCTGCA < NC_002947/831649‑831583 GAGAACCAGCTCAACGCCCTGCGCAACATACTGTGCTCGCTGCTTGGCCGCCCGCCCGGGCCGCTGCCGCAGCTGGAGGCCGGGCATGGCCAACTGCCCTTGCCCAACCGGGCAGTGTTGCAGGATGTACCTGCCAGCCTGCTGCAGCG > 3:68753/1‑149 GAGAACCAGCTCAACGCCCTGCGCAACATACTGTGCTCGCTGCTTGGCCGCCCGCCCGGGCCGCTGCCGCAGCTGGAGGCCGGGCATGGCCAACTGCCCTTGCCCAACCGGGCAGTGTTGCAGGATGTACCTGCCAGCCTGCTGCAGCG > 7:20455/1‑149 AGAACCAGCTCAACGCCCTGCGCAACATACTGTGCTCGCTGCTTGGCCGCCCGCCCGGGCCGCTGCCGCAGCTGGAGGCCGGGCATGGCCAACTGCCCTTGCCCAACCGGGCAGTGTTGCAGGATGTACCTGCCAGCCTGCTGCAGCGC > 2:283832/1‑149 CCGCCCGCCCGGGCCGCTGCCGCAGCTGGAGGCCGGGCATGGCCAACTGCCCTTGCCCAACCGGGCAGTGTTGCAGGATGTACCTGCCAGCCTGCTGCAGCGCCACCCCGACCAGCGCCGACTGCGCCGCCACTGCCTGCTCGGCGGCG > 8:24830/1‑149 GCCCGGGCCGCTGCCGCAGCTGGAGGCCGGGCATGGCCAACTGCCCTTGCCCAACCGGGCAGTGTTGCAGGATGTACCTGCCAGCCTGCTGCAGCGCCACCCCGACCAGCGCCGACTGCGCCGCCACTGCCTGCTCGGCGGCGCGGATG > 4:278896/1‑149 CCGCAGCTGGAGGCCGGGCATGGCCAACTGCCCTTGCCCAACCGGGCAGTGTTGCAGGATGTACCTGCCAGCCTGCTGCAGCGCCACCCCGACCAGCGCCGACTGCGCCGCCACTGCCTGCTCGGCGGCGCGGATGTCCGGGCGGCGCT < 3:278896/149‑1 CAGCTGGAGGCCGGGCATGGCCAACTGCCCTTGCCCAACCGGGCAGTGTTGCAGGATGTACCTGCCAGCCTGCTGCAGCGCCACCCCGACCAGCGCCGACTGCGCCGCCACTGCCTGCTCGGCGGCGCGGATGTCCGGGCGGCGCTGCA < 7:24830/149‑1 GAGAACCAGCTCAACGCCCTGCGCAACATACTGTGCTCGCTGCTTGGCCGCCCGCCCGGGCCGCTGCCGCAGCTGGAGGCCGGGCATGGCCAACTGCCCTTGCCCAACCGGGCAGTGTTGCAGGATGTACCTGCCAGCCTGCTGCAGCGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/831441‑831591 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccACCCCGACCAGCGCCGACTGCGCCGCCACTGCCTGCTCGGCGGCGCGGATGTCCGGGCGGCGCTGCA < NC_002947/831649‑831583 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |