New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 83159172 (1.220)4 (0.070) 4/250 NT 5.3% coding (865/1515 nt) PP_0715 outer membrane efflux protein
?NC_002947 = 831649 74 (1.280)coding (923/1515 nt) PP_0715 outer membrane efflux protein

CCAGCTCAACGCCCTGCGCAACATACTGTGCTCGCTGCTTGGCCGCCCGCCCGGGCCGCTGCCGCAGCTGGAGGCCGGGCATGGCCAACTGCCCTTGCCCAACCGGGCAGTGTTGCAGGATGTACCTGCCAGCCTGCTGCAGCGCCGCCCGGACATCCGCGCCGCCGAGCAGGCAGTGGCGGCGCAGTCGGCGCTGGTCGGGGTGGCCGAGGCCGATCTTTATCCACAGCTGAGCTTGCTCGGCAGTATCGGCTGGACCTTCCTATCGGCCAATCATCTGCCCGACACCTTCG  >  NC_002947/831446‑831738
                                                                                                                                                 |                                                                                                                                                   
ccAGCTCAACGCCCTGCGCAACATACTGTGCTCGCTGCTTGGCCGCCCGCCCGGGCCGCTGCCGCAGCTGGAGGCCGGGCATGGCCACCTGCCCTTGCCCAACCGGGCAGTGTTGCAGGATGGACCTGCCCGCCTGCTGCAGCgccgcc                                                                                                                                                  >  3:13/1‑149 (MQ=255)
ccAGCTCAACGCCCTGCGCAACATACTGTGCTCGCTGCTTGGCCGCCCGCCCGGGCCGCTGCCGCAGCTGGAGGCCGGGCATGGCCAACTGCCCTTGCCCAACCGGGCAGTGTTGCAGGATGTACCTGCCAGCCTGCTGCAGCgccgcc                                                                                                                                                  >  2:185608/1‑149 (MQ=255)
 cAGCTCAACGCCCTGCGCAACATACTGTGCTCGCTGCTTGGCCGCCCGCCCGGGCCGCTGCCGCAGCTGGAGGCCGGGCATGGCCAACTGCCCTTGCCCAACCGGGCAGTGTTGCAGGATGTACCTGCCAGCCTGCTGCAGCGCCGccc                                                                                                                                                 <  8:98153/149‑1 (MQ=255)
   gCTCAACGCCCTGCGCAACATCCTGTGCTCGCTGCTTGGCCGCCCGCCCGGGCCGCTGCCGCAGCTGGAGGCCGGGCATGGCCAACTGCCCTTGCCCAACCGGGCAGTGTTGCAGGATGTACCTGCCAGCCTGCTGCAGCGCCGCCCg                                                                                                                                                >  5:307942/1‑148 (MQ=255)
       aaCGCCCTGCGCAACATACTGTGCTCGCTGCTTGGCCGCCCGCCCGGGCCGCTGCCGCAGCTGGAGGCCGGGCATGGCCAACTGCCCTTGCCCAACCGGGCAGTGTTGCAGGATGTACCTGCCAGCCTGCTGCAGCGCCGCCCGGACAt                                                                                                                                           >  6:135129/1‑149 (MQ=255)
          gCCCTGCGCAACATACTGTGCTCGCTGCTTGGCCGCCCGCCCGGACCGCTGCCGCAGCTGGAGGCCGGGCATGGCCAACTGCCCTTGCCCAACCGGGCAGTGTTGCAGGATGTACCTGCCAGCCTGCTGCAGCGCCGCCCGGACATCcg                                                                                                                                        >  7:171260/1‑149 (MQ=255)
                 gcAACATACTGTGCTCGCTGCTTGGCCGCCCGCCCGGGCCGCTGCCGCAACTGGAGGCCGGGCATGGCCAACTGCCCTTGCCCAACCGGGCAGTGTTGCAGGATGTACCTGCCAGCCTGCTGCAGCGCCGCCCGGACATCCGCgccgcc                                                                                                                                 >  1:88336/1‑149 (MQ=255)
                        aCTGTGCTCGCTGCTTGGCCGCCCGCCCGGGCCGCTGCCGCAGCTGGAGGCCGGGCATGGCCAACTGCCCTTGCCCAACCGGGCAGTGTTGCAGGATGTACCTGCCAGCCTGCTGCAGCGCCGccc                                                                                                                                                 <  2:77930/126‑1 (MQ=255)
                         cTGTGCTCGCTGCTTGGCCGCCCGCCCGGGCCGCTGCCGCAGCTGGAGGCCGGGCATGGCCAACTGCCCTTGCCCAACCGGGCAGTGTTGCAGGATGTACCTGCCAGCCTGCTGCAGCGCCGCCCGGACATCCGCGCCGCCGAgcaggc                                                                                                                         <  6:38370/149‑1 (MQ=255)
                         cTGTGCTCGCTGCTTGGCCGCCCGCCCGGGCCGCTGCCGCAGCTGGAGGCCGGGCATGGCCAACTGCCCTTGCCCAACCGGGCAGTGTTGCAGGATGTACCTGCCAGCCTGCTGCAGCGCCGCCCGGACATCCGCGCCGCCGAgcagg                                                                                                                          <  4:326339/148‑1 (MQ=255)
                          tgtgCTCGCTGCTTGGCCGCCCGCCCGGGCCGCTGCCGCAGCTGGAGGCCGGGCATGGCCAACTGCCCTTGCCCAACCGGGCAGTGTTGCAGGATGTACCTGCCAGCCTGCTGCAGCGCCGCCCGGACATCCGCGCCGCCGAgcagg                                                                                                                          >  7:51728/1‑147 (MQ=255)
                            tgCTCGCTGCTTGGCCGCCCGCCCGGGCCGCTGCCGCAGCTGGAGGCCGGGCATGGCCAACTGCCCTTGCCCAACCGGGCAGTGTTGCAGGATGTACCTGCCAGCCTGCTGCAGCGCCGCCCGGACATCCGCGCCGCCGAgcaggca                                                                                                                        <  1:185608/147‑1 (MQ=255)
                              cTCGCTGCTTGGCCGCCCGCCCGGGCCGCTGCCGCAGCTGGAGGCCGGGCATGGCCAACTGCCCTTGCCCAACCGGGCAGTGTTGCAGGATGTACCTGCCAGCCTGCTGCAGCGCCGCCCGGACATCCGCGCCGCCGAGCAGGCAGTgg                                                                                                                    >  4:26024/1‑149 (MQ=255)
                                 gctgctTGGCCGCCCGCCCGGGCCGCTGCCGCAGCTGGAGGCCGGGCATGGCCAACTGCCCTTGCCCAACCGGGCAGTGTTGCAGGATGTACCTGCCAGCCTGCTGCAGCGCCGCCCGGACATCCGCGCCGCCGAGCAGGCAGTggcgg                                                                                                                 >  5:123494/1‑149 (MQ=255)
                                  ctgctTGGCCGCCCGCCCGGGCCGCTGCCGCAGCTGGAGGCCGGGCATGGCCAACTGCCCTTGCCCAACCGGGCAGTGTTGCAGGATGTACCTGCCAGCCTGCTGCAGCGCCGCCCGGACATCCGCGCCGCCGAGCAGGCAGTggcggc                                                                                                                <  5:135129/149‑1 (MQ=255)
                                   tgctTGGCCGCCCGCCCGGGCCGCTGCCGCAGCTGGAGGCCGGGCATGGCCAACTGCCCTTGCCCAACCGGGCAGTGTTGCAGGATGTACCTGCCAGCCTGCTGCAGCGCCGCCCGGACATCCGCGCCGCCGAGCAGGCAGTGgcggcg                                                                                                               <  8:53518/149‑1 (MQ=255)
                                     ctTGGCCGCCCGCCCGGGCCGCTGCCGCAGCTGGAGGCCGGGCATGGCCAACTGCCCTTGCCCAACCGGGCAGTGTTGCAGGATGTACCTGCCAGCCTGCTGCAGCGCCGCCCGGACATCCGCGCCGCCGAGCAGGCAGTGgcggcg                                                                                                               >  3:254368/1‑147 (MQ=255)
                                     ctTGGCCGCCCGCCCGGGCCGCTGCCGCAGCTGGAGGCCGGGCATGGCCAACTGCCCTTGCCCAACCGGGCAGTGTTGCAGGATGTACCTGCCAGCCTGCTGCAGCGCCGCCCGGACATCCGCGCCGCCGAGCAGGCAGTGGCGGCGCa                                                                                                             <  6:280502/149‑1 (MQ=255)
                                      ttGGCCGCCCGCCCGGGCCGCTGCCGCAGCTGGAGGCCGGGCATGGCCAACTGCCCTTGCGCAACCGGGCAGGGTTGCAGGATGTACCTGCCAGCCTGCTGCAGCGCCGGCCGGACATCCGCGCCGCCGAGCAGGCAGTGGCGGCGCAg                                                                                                            >  6:307159/1‑149 (MQ=255)
                                      ttGGCCGCCCGCCCGGGCCGCTGCCGCAGCTGGAGGCCGGGCATGGCCAACTGCCCTTGCCCAACCGGGCAGTGTTGCAGGATGTACCTGCCAGCCTGCTGCAGCGCCGCCCGGACATCCGCGCCGCCGAGCAGGCAGTGgcggcg                                                                                                               >  5:148350/1‑146 (MQ=255)
                                        ggCCGCCCGCCCGGGCCGCTGCCGCAGCTGGAGGCCGGGCATGGCCAACTGCCCTTGCCCAACCGGGCAGTGTTGCAGGATGTACCTGCCAGCCTGCTGCAGCGCCGCCCGGACATCCGCGCCGCCGAGCAGGCAGTGGCGGCGCa                                                                                                             <  6:148350/146‑1 (MQ=255)
                                         gccgccCGCCCGGGCCGCTGCCGCAGCTGGAGGCCGGGCATGGCCAACTGCCCTTGCCCAACCGGGCAGTGTTGCAGGATGTACCTGCCAGCCTGCTGCAGCGCCGCCCGGACATCCGCGCCGCCGAGCAGGCAGTGGCGGCGCAGTCg                                                                                                         <  1:160522/149‑1 (MQ=255)
                                         gccgccCGCCCGGGCCGCTGCCGCAGCTGGAGGCCGGGCATGGCCAACTGCCCTTGCCCAACCGGGCAGTGTTGCAGGATGTACCTGCCAGCCTGCTGCAGCGCCGCCCGGACATCCGCGCCGCCGAGCAGGCAGTGGCGGCGCAGTCg                                                                                                         <  8:206746/149‑1 (MQ=255)
                                          ccgcccgcCCGGGCCGCTGCCGCAGCTGGAGGCCGGGCATGGCCAACTGCCCTTGCCCAACCGGGCAGTGTTGCAGGATGTACCTGCCAGCCTGCTGCAGCGCCaccccgaccagcgccgactgcgccgccactgcctgctcggcggcg                                                                                                        >  8:24830‑M1/1‑104 (MQ=255)
                                           cgcccgccCGGGCCGCTGCCGCAGCTGGAGGCCGGGCATGGCCAACAGCCCTTGCCCAACCGGGCAGTGTTGCAGGATGTACCTGCCAGCCTGCTGCAGCGCCGCCCGGACATCCGCGCCGCCGAGCAGGCAGTGGCGGCGCAGTCGgc                                                                                                       >  1:275724/1‑149 (MQ=255)
                                            gcccgcccGGGCCGCTGCCGCAGCTGGAGGCCGGGCATGGCCAACTGCCCTTGCCCAACCGGGCAGTGTTGCAGGATGTACCTGCCAGCCTGCTGCAGCGCCGCCCGGACATCCGCGCCGCCGAGCAGGCAGTGGCGGCGCAGTCGgcg                                                                                                      >  7:49669/1‑149 (MQ=255)
                                             cccgcccgGGCCGCTGCCGCAGCTGGAGGCCGGGCATGGCCAACTGCCCTTGCCCAACCGGGCAGTGTTGCAGGATGTACCTGCCAGCCTGCTGCAGCGCCGCCCGGACATCCGCGCCGCCGAGCAGGCAGTGGCGGCGCAGTCGgcgc                                                                                                     <  2:85378/149‑1 (MQ=255)
                                               cgcccgGGCCGCTGCCGCAGCTGGAGGCCGGGCATGGCCAACTGCCCTTGCCCCACCGGGCAGTGTTGCAGGATGTACCTGCCAGCCTGCTGCAGCGCCGCCCGGACATCCGCGCCGCCGAGCAGGCAGTGGCGGCGCAGTCGGCGCTg                                                                                                   >  3:87594/1‑149 (MQ=255)
                                                gcccgGGCCGCTGCCGCAGCTGGAGGCCGGGCATGGCCAACTGCCCTTGCCCAACCGGGCAGTGTTGCAGGATGTACCTGCCAGCCTGCTGCAGCGCCaccccgaccagcgccgactgcgccgccactgcctgctcggcggcgcggatg                                                                                                  >  4:278896‑M1/1‑98 (MQ=255)
                                                  ccgGGCCGCTGCCGCAGCTGGAGGCCGGGCATGGCCAACTGCCCTTGCCCAACCGGGCAGTGTTGCAGGATGTACCTGCCAGCCTGCTGCAGCGCCGCCCGGACATCCGCGCCGCCGAGCAGGCAGTGGCGGCGCAGTCGGCGCTGGTc                                                                                                <  8:51728/149‑1 (MQ=255)
                                                             ccGCAGCTGGAGGCCGGGCATGGCCAACTGCCCTTGCCCAACCGGGCAGTGTTGCAGGATGTACCTGCCAGCCTGCTGCAGCGCCaccccgaccagcgccgactgcgccgccactgcctgctcggcggcgcggatgtccgggcggcgct                                                                                     <  3:278896‑M1/149‑65 (MQ=255)
                                                             ccGCAGCTGGAGGCCGGGCATGGCCAACTGCCCTTGCCCAACCGGGCAGTGTTGCAGGATGTACCTGCCAGCCTGCTGCAGCGCCGCCCGGACATCCGCGCCGCCGAGCAGGCAGTGGCGGCGCAGTCGGCGCTGGTCGGGGTggcc                                                                                       <  4:68753/147‑1 (MQ=255)
                                                               gCAGCTGGAGGCCGGGCATGGCCAACTGCCCTTGCCCAACCGGGCAGTGTTGCAGGATGTACCTGCCAGCCTGCTGCAGCGCCGCCCGGACATCCGCGCCGCCGAGCAGGCAGTGGCGGCGCAGTCGGCGCTGGTCGGGGTggccgagg                                                                                   <  3:26024/149‑1 (MQ=255)
                                                                cAGCTGGAGGCCGGGCATGGCCAACTGCCCTTGCCCAACCGGGCAGTGTTGCAGGATGTACCTGCCAGCCTGCTGCAGCGCCaccccgaccagcgccgactgcgccgccactgcctgctcggcggcgcggatgtccgggcggcgctgca                                                                                  <  7:24830‑M1/149‑68 (MQ=255)
                                                                   cTGGAGGCCGGGCATGGCCAACTGCCCTTGCCCAACCGGGCAGTGTTGCAGGATGTACCTGCCAGCCTGCTGCAGCGCCGCCCGGACATCCGCGCCGCCGAGCAGGCAGTGGCGGCGCAGTCGGCGCTGGTCGGGGTggccgaggccga                                                                               >  4:54575/1‑149 (MQ=255)
                                                                      gAGGCCGGGCATGGCCAACTGCCCTTGCCCAACCGGGCAGTGTTGCAGGATGTACCTGCCAGCCTGCTGCAGCGCCGCCCGGACATCCGCGCCGCCGAGCAGGCAGTGGCGGCGCAGTCGGCGCTGGTCGGGGTGGCCGAGGCCGAt                                                                              <  8:20455/147‑1 (MQ=255)
                                                                        ggCCGGGCATGGCCAACTGCCCTTGCCCAACCGGGCAGTGTTGCAGGATGTACCTGCCAGCCTGCTGCAGCGCCGCCCGGACATCCGCGCCGCCGAGCAGGCAGTGGCGGCGCAGTCGGCGCTGGTCGGGGTGGCCGAGGCCGATCttt                                                                          <  5:199777/149‑1 (MQ=255)
                                                                         gCCGGGCATGGCCAACTGCCCTTGCCCAACCGGGCAGTGTTGCAGGATGTACCTGCCAGCCTGCTGCAGCGCCGCCCGGACATCCGCGCCGCCGAGCAGGCAGTGGCGGCGCAGTCGGCGCTGGTCGGGGTGGCCGAGGCCGATCTTTa                                                                         >  5:139733/1‑149 (MQ=255)
                                                                             ggCATGGCCAACTGCCCTTGCCCAACCGGGCAGTGTTGCAGGATGTACCTGCCAGCCTGCTGCAGCGCCGCCCGGACATCcgc                                                                                                                                       <  3:315415/83‑1 (MQ=255)
                                                                             ggCATGGCCAACTGCCCTTGCCCAACCGGGCAGTGTTGCAGGATGTACCTGCCAGCCTGCTGCAGCGCCGCCCGGACATCcgc                                                                                                                                       >  4:315415/1‑83 (MQ=255)
                                                                                aTGGCCAACTGCCCTTGCCCAACCGGGCAGTGTTGCAGGATGTACCTGCCAGCCTGCTGCAGCGCCGCCCGGACATCCGCGCCGCCGAGCAGGCAGTGGTGGCGCAGTCGGCGCTGGTCGGGGTGGCCGAGGCCGATCTTTATCCACAg                                                                  >  4:175684/1‑149 (MQ=255)
                                                                                      aaCTGCCCTTGCCCAACCGGGCAGTGTTGCAGGATGTACCTGCCAGCCTGCTGCAGCGCCGCCCGGACATCCGCGCCGCCGAGCAGGCAGTGGCGGCGCAGTc                                                                                                          >  1:244633/1‑103 (MQ=255)
                                                                                      aaCTGCCCTTGCCCAACCGGGCAGTGTTGCAGGATGTACCTGCCAGCCTGCTGCAGCGCCGCCCGGACATCCGCGCCGCCGAGCAGGCAGTGGCGGCGCAGTc                                                                                                          <  2:244633/103‑1 (MQ=255)
                                                                                      aaCTGCCCTTGCCCAACCGGGCAGTGTTGCAGGATGTACCTGCCAGCCTGCTGCAGCGCCGCCCGGACATCCGCGCCGCCGAGCAGGCAGTGGCGGCGCAGTCGGCGCTGGTCGGGGTGGCCGAGGCCGATCTTTATCCACAGCTGAGc                                                            <  2:88336/149‑1 (MQ=255)
                                                                                       aCTGCCCTTGCCCAACCGGGCAGTGTTGCAGGATGTACCTGCCAGCCTGCTGCAGCGCCGCCCGGACATCCGCGCCGCCGAGCAGGCAGTGGCGGCGCAGTCGGCGCTGGTCGGGGTGGCCGAGGCCGATCTTTATCCACAGCTGAGCt                                                           <  6:123494/149‑1 (MQ=255)
                                                                                           cccTTGCCCAACCGGGCAGTGTTGCAGGATGTACCTGCCAGCCTGCTGCAGCGCCGCCCGGACATCCGCGCCGCCGAGCAGGCAGTGGCGGCGCAGTCGGCGCTGGTCGGGGTGGCCGAGGCCGATCTTTATCCACAGCTGAGCTTg                                                         <  6:245698/147‑1 (MQ=255)
                                                                                           cccTTGCCCAACCGGGCAGTGTTGCAGGATGTACCTGCCAGCCTGCTGCAGCGCCGCCCGGACATCCGCGCCGCCGAGCAGGCAGTGGCGGCGCAGTCGGCGCTGGTCGGGGTGGCCGAGGCCGATCTTTATCCACAGCTGAGCTTg                                                         <  6:139733/147‑1 (MQ=255)
                                                                                           cccTTGCCCAACCGGGCAGTGTTGCAGGATGTACCTGCCAGCCTGCTGCAGCGCCGCCCGGACATCCGCGCCGCCGAGCAGGCAGTGGCGGCGCAGTCGGCGCTGGTCGGGGTGGCCGAGGCCGATCTTTATCCACAGCTGAGCTTg                                                         <  3:54575/147‑1 (MQ=255)
                                                                                             cTTGCCCAACCGGGCAGTGTTGCAGGATGTACCTGCCAGCCTGCTGCAGCGCCGCCCGGACATCCGCGCCGCCGAGCAGGCAGTGGCGGCGCAGTCGGCGCTGGTCGGGGTGGCCGAGGCCGATCTTTATCCACAGCTGAGCTTGCTCg                                                     >  6:363738/1‑149 (MQ=255)
                                                                                                  ccAACCGGGCAGTGTTGCAGGATGTACCTGCCAGCCTGCTGCAGCGCCGCCCGGACATCCGCGCCGCCGAGCAGGCAGTGGCGGCGCAGTCGGCGCTGGTCGGGGTGGCCGAGGCCGATCTTTATCCACAGCTGAGCTTGCTCGGCAg                                                 >  4:121609/1‑148 (MQ=255)
                                                                                                   cAACCGGGCAGTGTTGCAGGATGTACCTGCCAGCCTGCTGCAGCGCCGCCCGGACATCCGCGCCGCCGAGCAGGCAGTGGCGGCGCAGTCGGCGCTGGTCGGGGTGGCCGAGGCCGATCTTTATCCACAGCTGAGCTTGCTCGGCAGTa                                               >  5:5238/1‑149 (MQ=255)
                                                                                                      ccGGGCAGTGTTGCAGGATGTACCTGCCAGCCTGCTGCAGCGCCGCCCGGACATCCGCGCCGCCGAGCAGGCAGTGGCGGCGCAGTCGGCGCTGGTCGGGGTGGCCGAGGCCGATCTTTATCCACAGCTGAGCTTGCTCGGCAGTATCg                                            <  8:750/149‑1 (MQ=255)
                                                                                                          gCAGTGTTGCAGGATGTACCTGCCAGCCTGCTGCAGCGCCGCCCGGACATCCGCGCCGCCGAGCAGGCAGTGGCGGCGCAGTCGGCGCTGGTCGGGGTGGCCGAGGCCGATCTTTATCCACAGCTGAGCTTGCTCGGCAGTATCGGCTg                                        <  8:171260/149‑1 (MQ=255)
                                                                                                            aGTGTTGCAGGATGTACCTGCCAGCCTGCTGCAGCGCCGCCCGGACATCCGCGCCGCCGAGCAGGCAGTGGCGGCGCAGTCGGCGCTGGTCGGGGTGGCCGAGGCCGATCTTTATCCACAGCTGAGCTTGCTCGGCAGTATCGGCTGGa                                      <  3:121609/149‑1 (MQ=255)
                                                                                                            aGTGTTGCAGGATGTACCTGCCAGCCTGCTGCAGCGCCGCCCGGACATCCGCGCCGCCGAGCAGGCAGTGGCGGCGCAGTCGGCGCTGGTCGGGGTGGCCGAGGCCGATCTTTATCCACAGCTGAGCTTGCTCGGCAGTATCGGCTGGa                                      >  2:13343/1‑149 (MQ=255)
                                                                                                                ttGCAGGATGTACCTGCCAGCCTGCTGCAGCGCCGCCCGGATATCCGCGCCGCCGAGCAGGCAGTGGCGGCGCAGTCGGCGCTGGTCGGGGTGGCCGAGGCCGATCTTTATCCACAGCTGAg                                                             <  8:4460/122‑1 (MQ=255)
                                                                                                                ttGCAGGATGTACCTGCCAGCCTGCTGCAGCGCCGCCCGGACATCCGCGCCGCCGAGCAGGCAGTGGCGGCGCAGTCGGCGCTGGTCGGGGTGGCCGAGGCCGATCTTTATCCACAGCTGAg                                                             >  7:4460/1‑122 (MQ=255)
                                                                                                                    aGGATGTACCTGCCAGCCTGCTGCAGCGCCGCCCGGACATCCGCGCCGCCGAGCAGGCAGTGGCGGCGCAGTCGGCGCTGGTCGGGGTggccg                                                                                      >  2:360890/1‑93 (MQ=255)
                                                                                                                    aGGATGTACCTGCCAGCCTGCTGCAGCGCCGCCCGGACATCCGCGCCGCCGAGCAGGCAGTGGCGGCGCAGTCGGCGCTGGTCGGGGTggccg                                                                                      <  1:360890/93‑1 (MQ=255)
                                                                                                                     ggATGTACCTGCCAGCCTGCTGCAGCGCCGCCCGGACATCCGCGCCGCCGAGCAGGCAGTGGCGGCGCAGTCGGCGCTGGTCGGGGTGGCCGAGGCCGATCTTTATCCACAGCTGAGCTTGCTCGGCAGTATCGGCTGGACCTTCCTAt                             <  1:283832/149‑1 (MQ=255)
                                                                                                                      gATGTACCTGCCAGCCTGCTGCAGCGCCGCCCGGACATCCGCGCCGCCGAGCAGGCAGTGGCGGCGCAGTCGGCGCTGGTCGGGGTGGCCGAGGCCGATCTTTATCCACAGCTGAGCTTGCTCGGCAGTATCGGCTGGACCTTCCTATc                            <  2:275724/149‑1 (MQ=255)
                                                                                                                         gTACCTGCCAGCCTGCTGCAGCGCCGCCCGGACATCCGCGCCGCCGAGCAGGCAGTGGCGGCGCAGTCGGCGCTGGTCGGGGTGGCCGAGGCCGATCTTTATCCACAGCTGAGCTTGCTCGGCAGTATCGGCTGGACCTTCCTATCGGc                         >  4:322716/1‑149 (MQ=255)
                                                                                                                           aCCTGCCAGCCTGCTGCAGCGCCGCCCGGACATCCGCGCCGCCGAGCAGGCAGTGGCGGCGCAGTCGGCGCTGGTCGGGGTGGCCGAGGCCGATCTTTATCCACAGCTGAGCTTGCTCGGCa                                                  >  8:34362/1‑122 (MQ=255)
                                                                                                                           aCCTGCCAGCCTGCTGCAGCGCCGCCCGGACATCCGCGCCGCCGAGCAGGCAGTGGCGGCGCAGTCGGCGCTGGTCGGGGTGGCCGAGGCCGATCTTTATCCACAGCTGAGCTTGCTCGGCa                                                  <  7:34362/122‑1 (MQ=255)
                                                                                                                           aCCTGCCAGCCTGCTGCAGCGCCGCCCGGACATCCGCGCCGCCGAGCAGGCAGTGGCGGCGCAGTCGGCGCTGGTCGGGGTGGCCGAGGCCGATCTTTATCCACAGCTGAGCTTGCTCGGCAGTATCGGCTGGACCTTCCTATCGGcc                        >  3:275985/1‑148 (MQ=255)
                                                                                                                           aCCTGCCAGCCTGCTGCAGCGCCGCCCGCACATCCGCGCCGCCGAGCAGGCAGTGGCGGCGCAGTCGGCGCTGGTCGGGGTGGCCGAGGCCGATCTTTATCCACAGCTGAGCTTGCTCGGCAGTATCGGCTGGACCTTCCTATCGGcc                        >  1:214904/1‑148 (MQ=255)
                                                                                                                            ccTGCCAGCCTGCTGCAGCGCCGCCCGGACATCCGCGCCGCCGAGCAGGAAGTGGCGGCGCAGTCGGCGGTGGTCGGGGTGGCCGAGGCCGATCTGTATCCAGAGCTGAGCTTGGTCGGGAGTGTCGGGTGGAGCTTCGTATccgggat                      >  4:272347/1‑143 (MQ=255)
                                                                                                                             cTGCCAGCCTGCTGCAGCGCCGCCCGGACATCCGCGCCGCCGAGCAGGCAGTGGCGGCGCAGTCGGCGCTGGTCGGGGTGGCCGAGGCCGATCTTTATCCACAGCTGAGCTTGCTCGGCAGTATCGGCTGGACCTTCCTATCGGCCAat                     >  5:150086/1‑149 (MQ=255)
                                                                                                                               gCCAGCCTGCTGCAGCGCCGCCCGGACATCCGCGCCGCCGAGCAGGCAGTGGCGGCGCAGTCGGCGCTGGTCGGGGTGGCCGAGGCCGATCTTTATc                                                                       >  5:12464/1‑97 (MQ=255)
                                                                                                                               gCCAGCCTGCTGCAGCGCCGCCCGGACATCCGCGCCGCCGAGCAGGCAGTGGCGGCGCAGTCGGCGCTGGTCGGGGTGGCCGAGGCCGATCTTTATc                                                                       <  6:12464/97‑1 (MQ=255)
                                                                                                                                ccAGCCTGCTGCAGCGCCGCCCGGACATCCGCGCCGCCGAGCAGGCAGTGGCGGCGCAGTCGGCGCTGGTCGGGGTGGCCGAGGCCGATCTTTATCCACAGCTGAGCTTGCTCGGCAGTATCGGCTGGACCTTCCTATCGGCCAatca                   <  6:150086/148‑1 (MQ=255)
                                                                                                                                ccAGCCTGCTGCAGCGCCGCCCGGACATCCGCGCCGCCGAGCAGGCAGTGGCGGCGCAGTCGGCGCTGGTCGGGGTGGCCGAGGCCGATCTTTATCCACAGCTGAGCTTGCTCGGCAGTATCGGCTGGACCTTCCTATCGGCCAatc                    <  1:13343/147‑1 (MQ=255)
                                                                                                                                   gCCTGCTGCAGCGCCGCCCGGACATCCGCGCCGCCGAGCAGGCAGTGGCGGCGCAGTCGGCGCTGGTCGGGGTGGCCGAGGCCGATCTTTATCCACAGCTGAGCTTGCTCGGCAGTATCGGCTGGACCTTCCTATCGGCCAATCATCTg               >  5:346454/1‑149 (MQ=255)
                                                                                                                                    ccTGCTGCAGCGCCGCCCGGACATCCGCGCCGCCGAGCAGGCAGTGGCGGCGCAGTCGGCGCTGGTCGGGGTGGCCGAGGCCGATCTTTATCCACAGCTGAGCTTGCTCGGCAGTATCGGCTGGACCTTCCTATCGGCCAatcatc                 >  5:24756/1‑146 (MQ=255)
                                                                                                                                    ccTGCTGCAGCGCCGCCCGGACATCCGCGCCGCCGAGCAGGCAGTGGCGGCGCAGTCGGCGCTGGTCGGGGTGGCCGAGGCCGATCTTTATCCACAGCTGAGCTTGCTCGGCAGTATCGGCTGGACCTTCCTATCGGCCAatcatc                 <  6:24756/146‑1 (MQ=255)
                                                                                                                                    ccTGCTGCAGCGCCGCCCGGACATCCGCGCCGCCGAGCAGGCAGTGGCGGCGCAGTCGGCGCTGGTCGGGGTGGCCGAGGCCGATCTTTATCCACAGCTGAGCTTGCTCGGCAGTATCGGCTGGACCTTCCTATCGGCCAATCATCTGc              <  4:275985/149‑1 (MQ=255)
                                                                                                                                      tgctgcAGCGCCGCCCGGACATCCGCGCCGCCGAGCAGGCAGTGGCGGCGCAGTCGGCGCTGGTCGGGGTGGCCGAGGCCGATCTTTATCCACAGCTGAGCTTGCTCGGCAGTATCGGCTg                                        <  1:219667/121‑1 (MQ=255)
                                                                                                                                      tgctgcAGCGCCGCCCGGACATCCGCGCCGCCGAGCAGGCAGTGGCGGCGCAGTCGGCGCTGGTCGGGGTGGCCGAGGCCGATCTTTATCCACAGCTGAGCTTGCTCGGCAGTATCGGCTg                                        >  2:219667/1‑121 (MQ=255)
                                                                                                                                      tgctgcAGCGCCGCCCGGACATCCGCGCCGCCGAGCAGGCAGTGGCGGCGCAGTCGGCGCTGGTCGGGGTGGCCGAGGCCGATCTTTATCCACAGCTGAGCTTGCTCGGCAGTATCGGCTGGACCTTCCTATCGGCCAATCATCTGccc            >  7:349890/1‑149 (MQ=255)
                                                                                                                                         tgcAGCGCCGCCCGGACATCCGCGCCGCCGAGCAGGCAGTGGCGGCGCAGTCGGCGCTGGTCGGGGTggcgctgcagcaggctggcaggtacatcctgcaacactgcccggttgggcaagggcagttggccatgcccggcctccagctg         <  7:24830‑M2/149‑83 (MQ=255)
                                                                                                                                          gcAGCGCCGCCCGGACATCCGCGCCGCCGAGCAGGCAGTGGCGGCGCAGTCGGCGCTGGTCGGGGTGGCCGAGGCCGATCTTTATCCACAGCTGAGCTTGCTCGGCAGTATCGGCTGGACCTTCCTATCGGCCAATCATCTGCCCGaca        >  7:350248/1‑149 (MQ=255)
                                                                                                                                          gcAGCGCCGCCCGGACATCCGCGCCGCCGAGCAGGCAGTGGCGGCGCAGTCGGCGCTGGTCGGGGTGGCCGAGGCCGATCTTTATCCACAGCTGAGCTTGCTCGGCAGTATCGGCTGGACCTTCCTATCGGCCAATCATCTGCCCGaca        >  5:84087/1‑149 (MQ=255)
                                                                                                                                            aGCGCCGCCCGGACATCCGCGCCGCCGAGCAGGCAGTGGCGGCGCAGTCGGCGCTGGTCGGGGTggcgctgcagcaggctggcaggtacatcctgcaacactgcccggttgggcaagggcagttggccatgcccggcctccagctgcgg      <  3:278896‑M2/149‑86 (MQ=255)
                                                                                                                                              cgccgcCCGGACATCCGCGCCGCCGAGCAGGCAGTGGCGGCGCAGTCGGCGCTGGTCGGGGTGGCCGAGGCCGATCTTTATCCACAGCTGAGCTTGCTCGGCAGTATCGGCTGGACCTTCCTATCGGCCAATCATCTGCCCGACACCtt    >  5:91443/1‑149 (MQ=255)
                                                                                                                                                ccgccCGGACATCCGCGCCGCCGAGCAGGCAGTGGCGGCGCAGTCGGCGCTGGTCGGGGTGGCCGAGGCCGATCTTTATCCACAGCTGAGCTTGCTCGGCAGTATCGGCTGGACCTTCCTATCGGCCAATCATCTGCCCGACACCTTCg  <  6:5238/149‑1 (MQ=255)
                                                                                                                                                 |                                                                                                                                                   
CCAGCTCAACGCCCTGCGCAACATACTGTGCTCGCTGCTTGGCCGCCCGCCCGGGCCGCTGCCGCAGCTGGAGGCCGGGCATGGCCAACTGCCCTTGCCCAACCGGGCAGTGTTGCAGGATGTACCTGCCAGCCTGCTGCAGCGCCGCCCGGACATCCGCGCCGCCGAGCAGGCAGTGGCGGCGCAGTCGGCGCTGGTCGGGGTGGCCGAGGCCGATCTTTATCCACAGCTGAGCTTGCTCGGCAGTATCGGCTGGACCTTCCTATCGGCCAATCATCTGCCCGACACCTTCG  >  NC_002947/831446‑831738

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.