New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 893783 =51 (0.860)6 (0.110) 4/236 NT 11.8% coding (266/303 nt) PP_0775 hypothetical protein
?NC_002947 893872 = 43 (0.790)coding (177/303 nt) PP_0775 hypothetical protein

TCATCAGGACGAAGAAGGCCACTGGGTGGCGGAACTTTCGTGCGGCCATACCCAGCACCTGCGCCACCAGCCGCCGTGGCAGGCACGCCCCTGGGTGCTCGACCCGGCACAACGTGCGCAACACATCGGCCAGCCTTTCGCTTGCGGCTGGTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/893935‑893783
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcggctggtgGCGCAGGTGCTGGGTATGGCCGCACGAAAGTTCCGCCACCCAGTGGCCTTCTTCGTCCTGATGAAAGCCGTTGATCCGACTGATGGGCCGTTGCTCGTCTGCACCACGTTCGCAATCGGACGATGGCAAGGTTACACTTGTCCGCTC  >  NC_002947/893872‑894018
                                                                                                                                                                                                                                                                                                            
TCATCAGGACGAAGAAGGCCACTGGGTGGCGGAACTTTCGTGCGGCCATACCCAGCACCTGCGCCACCAGCCGCCGTGGCAGGCACGCCCCTGGGTGCTCGACCCGGCACAACGTGCGCAACACATCGGCCAGCCTTTCGCTTGCGGC                                                                                                                                                          <  2:219516/148‑1
  ATCAGGACGAAGAAGGCCACTGGGTGGCGGAACTTTCGTGCGGCCATACCCAGCACCTGCGCCACCAGCCGCCGTGGCAGGCACGCCCCTGGGTGCTCGACCCGGCACAACGTGCGCAACACATCGGCCAGCCTTTCGCTTGCGGCTGG                                                                                                                                                       >  2:331185/1‑149
  ATCAGGACGAAGAAGGCCACTGGGTGGCGGAACTTTCGTGCGGCCATACCCAGCACCTGCGCCACCAGCCGCCGTGGCAGGCACGCCCCTGGGTGCTCGACCCGGCACAACGTGCGCAACACATCGGCCAGCCTTTCGCTTGCGGCTGG                                                                                                                                                       >  5:312953/1‑149
                                             CCATACCCAGCACCTGCGCCACCAGCCGCCGTGGCAGGCACGCCCCTGGGTGCTCGACCCGGCACAACGTGCGCAACACATCGGCCAGCCTTTCGCTTGCGG                                                                                                                                                           >  7:329378/1‑102
                                             CCATACCCAGCACCTGCGCCACCAGCCGCCGTGGCAGGCACGCCCCTGGGTGCTCGACCCGGCACAACGTGCGCAACACATCGGCCAGCCTTTCGCTTGCGG                                                                                                                                                           <  8:329378/102‑1
                                                                CACCAGCCGCCGTGGCAGGCACGCCCCTGGGTGCTCGACCCGGCACAACGTGCGCAACACATCGGCCAGCCTTTCGCTTGCGGCTGGTGGCGCAGGTGCTGGGTATGGCCGCACGAAAGTTCCGCCACCCAGTGGCCTTCTTCATCCT                                                                                          >  7:109180/1‑148
                                                                CACCAGCCGCCGTGGCAGGCACGCCCCTGGGTGCTCGACCCGGCACAACGTGCGCAACACATCGGCCAGCCTTTCGCTTGCGGCTGGTGGCGCAGGTGCTGGGTATGGCCGCACGAAAGTTCCGCCACCCAGTGGCCTTCTTCATCCT                                                                                          >  7:114512/1‑148
                                                                  CCAGCCGCCGTGGCAGGCACGCCCCTGGGTGCTCGACCCGGCACAACGTGCGCAACACATCGGCCAGCCTTTCGCTTGCGGCTGGTGGCGCAGGTGCTGGGTATGGCCGCACGAAAGTTCCGCCACCCAGTGGCCTTCTTCGTCCTGAT                                                                                       >  1:36389/1‑149
                                                                                                  TCGACCCGGCACAACGTGCGCAACACATCGGCCAGCCTTTCGCTTGC                                                                                                                                                             <  6:112570/47‑1
                                                                                                    GACCCGGCACAACGTGCGCAACACATCGGCCAGCCTTTCGCTTGCGGCTGGTGGCGCAGGTGCTGGGTATGGCCGCACGAAAGTTCCGCCACCCAGTGGCCTTCTTCATCCTGATGAAAGCCGTTGATCCGACTGATGGGCCGTTGCTC                                                     <  8:109180/149‑1
                                                                                                    GACCCGGCACAACGTGCGCAACACATCGGCCAGCCTTTCGCTTGCGGCTGGTGGCGCAGGTGCTGGGTATGGCCGCACGAAAGTTCCGCCACCCAGTGGCCTTCTTCATCCTGATGAAAGCCGTTGATCCGACTGATGGGCCGTTGCTC                                                     <  8:114512/149‑1
                                                                                                                    CGCAACACATCGGCCAGCCTTTCGCTTGCGGCTGGTGGCGCAGGTGCTGGGTATGGCCGCACGAAAGTTCCGCCACCCAGTGGCCTTCTTCGTCCTGATGAAAGCCGTTGATCCGACTGATGGGCCGTTGCTCGTCTGCACCACGTTCG                                     <  2:36389/149‑1
                                                                                                                                                CGGCTGGTGGCGCAGGTGCTGGGTATGGCCGCACGAAAGTTCCGCCACCCAGTGGCCTTCTTCGTCCTGATGAAAGCCGTTGATCCGACTGATGGGCCGTTGCTCGTCTGCACCACGTTCGCAATCGGACGATGGCAAGGTTACACTTG         >  1:256861/1‑149
                                                                                                                                                       TGGCTCAGGTGCTGGGTATGGCCGCACGAAAGTTCCGCCTCCCAGTGGCATTCTTCGTCCTGATGAAAGCCGTTGATCCGAGTGATGGGCCGTTGCTCGTCTGCACCACGTTCGCAATCGTACGATGTCAAGGTTACACTTGTCCGCTC  <  6:256739/149‑1
                                                                                                                                                                                                                                                                                                            
TCATCAGGACGAAGAAGGCCACTGGGTGGCGGAACTTTCGTGCGGCCATACCCAGCACCTGCGCCACCAGCCGCCGTGGCAGGCACGCCCCTGGGTGCTCGACCCGGCACAACGTGCGCAACACATCGGCCAGCCTTTCGCTTGCGGCTGGTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/893935‑893783
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcggctggtgGCGCAGGTGCTGGGTATGGCCGCACGAAAGTTCCGCCACCCAGTGGCCTTCTTCGTCCTGATGAAAGCCGTTGATCCGACTGATGGGCCGTTGCTCGTCTGCACCACGTTCGCAATCGGACGATGGCAAGGTTACACTTGTCCGCTC  >  NC_002947/893872‑894018

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.