New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	893783 =	51 (0.860)	6 (0.110)	4/236	NT	11.8%	coding (266/303 nt)	PP_0775	hypothetical protein
	?	NC_002947	893872 =	43 (0.790)					coding (177/303 nt)	PP_0775	hypothetical protein

CCAAGGTGCGCACCAGGCCCAGGCTGATCGAAGTCAGGCCGACACCAAAGTCGGTCGGCGCAATGAAAAATGTCTGCATGCGTGCTTCTCGAAATAAGCGGTGCAAGAAATTAGCGGTCAAGGGTAGCGCTATCGGCCCCTTGTGCGCACCAGCCGCAAGCGAAAGGCTGGCCGATGTGTTGCGCACGTTGTGCCGGGTCGAGCACCCAGGGGCGTGCCTGCCACGGCGGCTGGTGGCGCAGGTGCTGGGTATGGCCGCACGAAAGTTCCGCCACCCAGTGGCCTTCTTCGTCCT  >  NC_002947/893636‑893930                                                                                                                                                    |                                                                                                                                                    gagcggacaagtgtaaccttgacatcgtacgattgcgaacgtggtgcagacgagcaacggcccatcactcggatcaacggctttcatcaggacgaagaatgccactgggaggcggaactttcgtgcggccatacccagcacctgagcca                                                                                                                                                    <  6:256739‑M1/2‑1 (MQ=255)   aaGGTGCGCACCAGGCCCAGGCTGATCGAAGTCAGGCCGACACCAAAGTCGGTCGGCGCAATGAAAAATGTCTGCATGCGTGCTTCTCGAAATAAGCGGTGCAAGAAATTAGCGGTCAAGGGTAGCGCTATCGGCCCCTTGTGCGCAc                                                                                                                                                   >  2:43509/1‑148 (MQ=255)        caagtgtaaccttgccatcgtccgattgcgaacgtggtgcagacgagcaacggcccatcagtcggatcaacggctttcatcaggacgaagaaggccactgggtggcggaactttcgtgcggccatacccagcacctgcgcCACCAGCCg                                                                                                                                             >  1:256861‑M1/141‑149 (MQ=255)                 gcccaggcTGATCGAAGTCAGGCCGACACCAAAGTCGGTCGGCGCAATGAAAAATGTCTGCATGCGTGCTTCTCGAAATAAGCGGTGCAAGAAATTAGCGGTCAAGGGTAGCGCTATCGGCCCCTTGTGCGCACCAGCCGCAAGCGa                                                                                                                                      >  1:280549/1‑147 (MQ=255)                 gaccaggcTGATCGAAGTCAGTCCGACACAAAAGTCTGTCGGCGCAATGAAAAATGTCTGCATGCGTGCTTCTCGAAATAAGCGGTGAAAGAAATTAGCGGTCAAGGGTAGCGCTATCGGCCCCTTGTGCGCACCAGCCGCAAGCGaaa                                                                                                                                    <  4:210942/147‑1 (MQ=255)                  cccacgcTGATCGAAGTCAGGCCGACACCAAAGTCGGTCGGCGCAATGAAAAATGTCTGCATGCGTGCTTCTCGAAATAAGCGGTGCAAGAAATTAGCGGTCAAGGGTAGCGCTATCGGCCCCTTGTGCGCACCAGCCGCAAGCGAAAg                                                                                                                                   <  3:284795/149‑1 (MQ=255)                        cTGATCGAAGTCAGGCCGACACCAAAGTCGGTCGGCGCAATGAAAAATGTCTGCATGCGTGCTTCTCGAAATAAGCGGTGCAAGAAATTAGCGGTCAAGGGTAGCGCTATCGGCCCCTTGTGCGCACCAGCCGCAAGCGAAAGGCTGGc                                                                                                                             >  3:368911/1‑149 (MQ=255)                          gATCGAAGTCAGGCCGACACCAAAGTCGGTCGGCGCAATGAAAAATGTCTGCATGCGTGCTTCTCGAAATAAGCGGTGCAAGAAATTAGCGGTCAAGGGTAGCGCTATCGGCCCCTTGTGCGCACCAGCCGCAAGCGAAAGGCTGGcc                                                                                                                            >  1:209124/1‑148 (MQ=255)                           aTCGAAGTCAGGCCGACACCAAAGTCGGTCGGCGCAATGAAAAATGTCTGCATGCGTGCTTCTCGAAATAAGCGGTGCAAGAAATTAGCGGTCAAGGGTAGCGCTATCGGCCCCTTGTGCGCACCAGCCGCAAGCGAAAGGCTGGCCGa                                                                                                                          >  1:341706/1‑149 (MQ=255)                              gaatggaGGCCTACACCATAGTCGGTCGGCTCAATGAAATATGTCTGCATGCGTGCTTCTCGAAATAAGCGGTGCAAGAAATTAGCGGTCAAGGGTAGCGCTATCGGCCCCTTGTGCGCACCAGCCGCAAGCGAAAGGCTGGCCGAtg                                                                                                                        <  3:95183/142‑1 (MQ=255)                               aaGTCAGGCCGACACCAAAGTCGGTCGGCGCAATGAAAAATGTCTGCATGCGTGCTTCTCGAAATAAGCGGTGCAAGAAATTAGCGGTCAAGGCTAGCGCTATAGCCCCCTAGTGAGAACCAGCCCCAACCGAAAGGCTGGCCGAtgtg                                                                                                                      >  8:288763/1‑149 (MQ=255)                                 gTCAGGCCGACACCAAAGTCGGTCGGCGCAATGAAAAATGTCTGCATGCGTGCTTCTCGAAATAAGCAGTGCAAGAAATTAGCGGTCAAGGGTAGCGCTATCGGCCCCTTGTGCGCACCAGCCGCAAGCGAAAGGCTGGCCGATGTGtt                                                                                                                    >  4:302257/1‑149 (MQ=255)                                   cAGGCCGACACCAAAGTCGGTCGGCGCAATGAAAAATGTCTGCATGCGTGCTTCTCGAAATAAGCGGTGCAAGAAATTAGCGGTCAAGGGTAGCGCTATCGGCCCCTTGTGCGCACCAGCCGCAAGCGAAAGGCTGGCCGATGTGTTgc                                                                                                                  >  8:93616/1‑149 (MQ=255)                                    cgaacgtggtgcagacgagcaacggcccatcagtcggatcaacggctttcatcaggacgaagaaggccactgggtggcggaactttcgtgcggccatacccagcacctgcgcCACCAGCCGCAAGCGAAAGGCTGGCCGATGTGTTgcg                                                                                                                 <  2:36389‑M1/37‑1 (MQ=255)                                      gCCGACACCAAAGTCGGTCGGCGCAATGAAAAATGTCTGCATGCGTGCTTCTCGAAATAAGCGGTGCAAGAAATTAGCGGTCAAGGGTAGCGCTATCGGCCCCTTGTGCGCACCAGCCGCAAGCGAAAGGCTGGCCGATGTGTTGCGCa                                                                                                               <  2:280549/149‑1 (MQ=255)                                              cAAAGTCGGTCGGCGCAATGAAAAATGTCTGCATGCGTGCTTCTCGAAATAAGCGGTGCAAGAAATTAGCGGTCAAGGGTAGCGCTATCGGCCCCTTGTGCGCACCAGCCGCAAGCGAAAGGCTGGCCGATGTGtt                                                                                                                    >  1:316672/1‑136 (MQ=255)                                              cAAAGTCGGTCGGCGCAATGAAAAATGTCTGCATGCGTGCTTCTCGAAATAAGCGGTGCAAGAAATTAGCGGTCAAGGGTAGCGCTATCGGCCCCTTGTGCGCACCAGCCGCAAGCGAAAGGCTGGCCGATGTGtt                                                                                                                    <  2:316672/136‑1 (MQ=255)                                              cAAAGTCGGTCGGCGCAATGAAAAATGTCTGCATGCGTGCTTCTCGAAATAAGCGGTGCAAGAAATTAGCGGTCAAGGGTAGCGCTATCGGCCCCTTGTGCGCACCAGCCGCAAGCGAAAGGCTGGCCGATGTGTTGCGCACGTTGTGc                                                                                                       >  5:204968/1‑149 (MQ=255)                                              cAAAGTCGGTCGGCGCAATGAAAAATGTCTGCATGCGTGCTTCTCGAAATAAGCGGTGCAAGAAATTAGCGGTCAAGGGTAGCGCTATCGGCCCCTTGTGCGCACCAGCCGCAAGCGAAAGGCTGGCCGATGTGTTGCGCACGTTGTGc                                                                                                       >  1:331185/1‑149 (MQ=255)                                                    gagcaacggcccatcagtcggatcaacggctttcatcaggatgaagaaggccactgggtggcggaactttcgtgcggccatacccagcacctgcgcCACCAGCCGCAAGCGAAAGGCTGGCCGATGTGTTGCGCACGTTGTGCCGGGTc                                                                                                 <  8:114512‑M1/53‑1 (MQ=255)                                                    gagcaacggcccatcagtcggatcaacggctttcatcaggatgaagaaggccactgggtggcggaactttcgtgcggccatacccagcacctgcgcCACCAGCCGCAAGCGAAAGGCTGGCCGATGTGTTGCGCACGTTGTGCCGGGTc                                                                                                 <  8:109180‑M1/53‑1 (MQ=255)                                                      gtcggCGCAATGAAAAATGTCTGCATGCTTGCTTCTCGAAATAAGCGGTGCAAGAAATTAGCGGTCAAGGGTAGCGCTATCGGCCCCTTGTGCGCACCAGCCGCAAGCGAAAGGCTGGCCGATGTGTTGCGCACGTTGTGCCGGGTCGa                                                                                               <  8:38937/149‑1 (MQ=255)                                                          gcgcAATGAAAAATGTCTGCATGCGTGCTTGTCGATATAAGCGGTGCAAGAAATTAGCGGTCAAGGGTAGCGCTATCGGCCCCTTGTGCGCACCAGCCGCAAGCGAAAGGCTGGCCGAGGGGTTGCGCACGTTGTGCCGGGTCGAGCAc                                                                                           >  4:118296/1‑149 (MQ=255)                                                              aaTGAAAAATGTCTGCATGCGTGCTTCTCGAAATAAGCGGTGCAAGAAATTAGCGGTCAAGGGTAGCGCTATCGGCCCCTTGTGCGCACCAGCCGCAAGCGAAAGGCTGGCCGATGTGTTGCGCACGTTGTGCCGGGTCGAGCACCCAg                                                                                       <  6:204968/149‑1 (MQ=255)                                                              aaTGAAAAATGTCTGCATGCGTGCTTCTCGAAATAAGCGGTGCAAGAAATTAGCGGTCAAGGGTAGCGCTATCGGCCCCTTGTGCGCACCAGCCGCAAGCGAAAGGCTGGCCGATGTGTTGCGCACGTTGTGCCGGGTCGAGCACCCAg                                                                                       <  4:368911/149‑1 (MQ=255)                                                               aTGAAAAATGTCTGCATGCGTGCTTCTCGAAATAAGCAGTGCAAGAAATTAGCGGTCAAGGGTAGCGCTATCGGCCCCTTGTGCGCACCAGCCGCAAGCGAAAGGCTGGCCGATGTGTTGCGCACGTTGTGCCGGGTCGAGCACCCAgg                                                                                      <  3:302257/149‑1 (MQ=255)                                                                tGAAAAATGTCTGCATGCGTGCTTCTCGAAATAAGCGGTGCAAGAAATTAGCGGTCAAGGGTAGCGCTATCGGCCCCTTGTGCGCACCAGCCGCAAGCGAAAGGCTGGCCGATGTGTTGCGCACGTTGTGCCGGGTCGAGCACCCAggg                                                                                     >  5:230377/1‑149 (MQ=255)                                                                  aaaaaTGTCTGCATGCGTGCTTCTCGAAATAAGCGGTGCAAGAAATTAGCGGTCAAGGGTAGCGCTATCGGCCCCTTGTGCGCACCAGCCGCAAGCGAAAGGCTGGCCGATGTGTTGCGCACGTTGTGCCGGGTCGAGCACCCAGGGGc                                                                                   >  8:155273/1‑149 (MQ=255)                                                                    aaaTGTCTGCATGCGTGCTTCTCGAAATAAGCGGTGCAAGAAATTAGCGGTCAAGGGTAGCGCTATCGGCCCCTTGTGCGCACCAGCCGCAAGCGAAAGGCTGGCCGATGTGTTGCGCACGTTGTGCCGGGTCGAGCACCCAGGGGCGt                                                                                 <  2:341706/149‑1 (MQ=255)                                                                    aaaTGTCTGCATGCGTGCTTCTCGAAATAAGCGGTGCAAGAAATTAGCGGTCAAGGGTAGCGCTATCGGCCCCTTGTGCGCACCAGCCGCAAGCGAAAGGCTGGCCGATGTGTTGCGCACGTTGTGCCGGGTCGAGCACCCAGGGGCGt                                                                                 <  7:155273/149‑1 (MQ=255)                                                                       tGTCTCCATGCGGGCTTCTCGAAATAAGCGGTGCAAGAAATTAGCGGTCAAGGGTAGCGCTATCGGCCCCTTGTGCGCACCAGCCGCAAGCGAAAGGCTGGCCGATGTGTTGCGCACGTTGTGCCGGGTCGAGCACCCAGGGGCGtgcc                                                                              <  2:304263/149‑1 (MQ=255)                                                                           tGCATGCGTGCTTCTCGAAATAAGCGGTGCAAGAAATTAGCGGTCAAGGGTAGCGCTATCGGCCCCTTGTGCGCACCAGCCGCAAGCGAAAGGCTGGCCGATGTGTTGCGCACGTTGTGCCGGGTCGAGCACCCAGGGGCGtgcctgc                                                                           >  5:357675/1‑148 (MQ=255)                                                                             cATGCGTGCTTCTCGAAATAAGCGGTGCAAGAAATTAGCGGTCAAGGGTAGCGCTATCGGCCCCTTGTGCGCACCAGCCGCAAGCGAAAGGCTGGCCGATGTGTTGCGCACGTTGTGCCGGGTCGa                                                                                               >  4:154968/1‑126 (MQ=255)                                                                                gCGTGCTTCTCGAAATAAGCGGTGCAAGAAATTAGCGGTCAAGGGTAGCGCTATCGGCCCCTTGTGCGCACCAGCCGCAAGCGAAAGGCTGGCCGATGTGTTGCGCACGTTGTGCCGGGTCGAGCACCCAGGGGCGTGCCTGCCAcggc                                                                     >  2:206599/1‑149 (MQ=255)                                                                                 cGTGCTTCTCGAAATAAGCGGTGCAAGAAATTAGCGGTCAAGGGTAGCGCTATCGGCCCCTTGTGCGCACCAGCCGCAAGCGAAAGGCTGGCCGATGTGTTGCGCACGTTGTGCCGGGTCGAGCACCCAGGGGCGTGCCTGCCAcggcg                                                                    >  6:360284/1‑149 (MQ=255)                                                                                 cGTGCTTCTCGAAATAAGCGGTGCAAGAAATTAGCGGTCAAGGGTAGCGCTATCGGCCCCTTGTGCGCACCAGCCGCAAGCGAAAGGCTGGCCGATGTGTTGCGCACGTTGTGCCGGGTCGAGCACCCAGGGGCGTGCCTGCCAcggcg                                                                    <  6:357675/149‑1 (MQ=255)                                                                                  gTGCTTCTCGAAATAAGCGGTGCAAGAAATTAGCGGTCAAGGGTAGCGCTATCGGCCCCTTGTGCGCACCAGCCGCAAGCGAAAGGCTGGCCGATGTGTTGCGCACGTTGTGCCGGGTCGAGCACCCAGGGGCGTGCCTGCCAcggcgg                                                                   >  6:307491/1‑149 (MQ=255)                                                                                      atcaggacgaagaaggccactgggtggcggaactttcgtgcggccatacccagcacctgcgcCACCAGCCGCAAGCGAAAGGCTGGCCGATGTGTTGCGCACGTTGTGCCGGGTCGAGCACCCAGGGGCGTGCCTGCCACGGCGGCtgg                                                               >  1:36389‑M1/63‑149 (MQ=255)                                                                                         tcGAAATAAGCGGTGCAAGAAATTAGCGGTCAAGGGTAGCGCTATCGGCCCCTTGTGCGCACCAGCCGCAAGCGAAAGGCTGGCCGATGTGTTGCGCACGTTGTGCCGGGTCGAGCACCCAGGGGCGTGCCTGCCACGGCGGCtggtgg                                                            >  4:125299/1‑149 (MQ=255)                                                                                         aggatgaagaaggccactgggtggcggaactttcgtgcggccatacccagcacctgcgcCACCAGCCGCAAGCGAAAGGCTGGCCGATGTGTTGCGCACGTTGTGCCGGGTCGAGCACCCAGGGGCGTGCCTGCCACGGCGGCtggtg                                                             >  7:114512‑M1/60‑148 (MQ=255)                                                                                         aggatgaagaaggccactgggtggcggaactttcgtgcggccatacccagcacctgcgcCACCAGCCGCAAGCGAAAGGCTGGCCGATGTGTTGCGCACGTTGTGCCGGGTCGAGCACCCAGGGGCGTGCCTGCCACGGCGGCtggtg                                                             >  7:109180‑M1/60‑148 (MQ=255)                                                                                              aTAAGCGGTGCAAGAAATTAGCGGTCAAGGGTAGCGCTATCGGCCCCTTGTGCGCACCAGCCGCAAGCGAAAGGCTGGCCGATGTGTTGCGCACGTTGTGCCGGGTCGAGCACCCAGGGGCGTGCCTGCCACGGCGGCTGGTGGCGCAg                                                       <  7:93616/149‑1 (MQ=255)                                                                                                aaGCGGTGCAAGAAATTAGCGGTCAAGGGTAGCGCTATCGGCCCCTTGTGCGCACCAGCCGCAAGCGAAAGGCTGGCCGATGTGTTGCGCACGTTGTGCCGGGTCGAGCACCCAGGGGCGTGCCTGCCACGGCGGCTGGTGGCGCAGGt                                                     >  1:261769/1‑149 (MQ=255)                                                                                                     gTGCAAGAAATTAGCGGTCAAGGGTAGCGCTATCGGCCCCTTGTGCGCACCAGCCGCAAGCGAAAGGCTGGCCGATGTGTTGCGCACGTTGTGCCGGGTCGAGCACCCAGGGGCGTGCCTGCCACGGCGGCTGGTGGCGCAGGTGCTgg                                                <  3:125299/149‑1 (MQ=255)                                                                                                        cAAGAAATTAGCGGTCAAGGGTAGCGCTATCGGCCCCTTGTGCGCACCAGCCGCAAGCGAAAGGCTGGCCGATGTGTTGCGCACGTTGTGCCGGGTCGAGCAGCCAGGGGCGTGCCTGCCACGGCGGCTGGTGGCGCAGGTGCTGGGt                                              <  3:118296/148‑1 (MQ=255)                                                                                                         aaGAAATTAGCGGTCAAGGGTAGCGCTATCGGCCCCTTGTGCGCACCAGCCGCAAGCGAAAGGCTGGCCGATGTGTTGCGCACGTTGTGCCGGGTCGAGCACCCAGGGGCGTGCCTGCCACGGCGGCTGGTGGCGCAGGTGCTGGGTAt                                            >  6:312953/1‑149 (MQ=255)                                                                                                          aGAAATTAGCGGTCAAGGGTAGCGCTATCGGCCCCTTGTGCGCACCAGCCGCAAGCGAAAGGCTGGCCGATGTGTTGCGCACGTTGTGCCGGGTCGAGCACCCAGGGGCGTGCCTGCCACGGCGGCTGGTGGCGCAGGTGCTGGGTATg                                           >  2:45258/1‑149 (MQ=255)                                                                                                           gAAATTAGCGGTCAAGGGTAGCGCTATCGGCCCCTTGTGCGCACCAGCCGCAAGCGAAAGGCTGGCCGATGTGTTGCGCACGTTGTGCCGGGTCGAGCACCCAGGGGCGTGCCTGCCACGGCGGCTGGTGGCGCAGGTGCTGGGTATgg                                          <  5:360284/149‑1 (MQ=255)                                                                                                              aTTAGCGGTCAAGGGTAGCGCTATCGGCCCCTTGTGCGCACCAGCCGCAAGCGAAAGGCTGGCCGATGTGTTGCGCACGTTGTGCCGGGTCGAGCACCCAGGGGCGTGCCTGCCACGGCGGCTGGTGGCGCAGGTGCTGGGTATGGCCg                                       <  7:303191/149‑1 (MQ=255)                                                                                                                 aGCGGTCAAGGGTAGCGCTATCGGCCCCTTGTGCGCACCAGCCGCAAGCGAAAGGCTGGCCGATGTGTTGCGCACGTTGTGCCGGGTCGAGCACCCAGGGGCGTGCCTGCCACGGCGGCTGGTGGCGCAGGTGCTGGGTATGGCCGCa                                     <  2:209124/148‑1 (MQ=255)                                                                                                                           ggTAGCGCTATCGGCCCCTTGTGCGCACCAGCCGCAAGCGAAAGGCTGGCCGATGTGTTGCGCACGTTGTGCCGGGTCGAGCACCCAGGGGCGTGCCTGCCACGGCGGCTGGTGGCGCAGGTGCTGGGTATGGCCGCACGAAAGTTCCg                          <  2:261769/149‑1 (MQ=255)                                                                                                                                cgcTATCGGCCCCTTGTGCGCACCAGCCGCAAGCGAAAGGCTGGc                                                                                                                             >  1:121/1‑45 (MQ=255)                                                                                                                                cgcTATCGGCCCCTTGTGCGCACCAGCCGCAAGCGAAAGGCTGGc                                                                                                                             <  2:121/45‑1 (MQ=255)                                                                                                                                    aTCGGCCCCTTGTGCGCACCAGCCGCAAGCGAAAGGCTGGCCGATGTGTTGCGCACGTTGTGCCGGGTCGAGCACCCAGGGGCGTGCCTGCCACGGCGGCTGGTGGCGCAGGTGCTGGGTATGGCCGCACGAAAGTTCCGCCACCCAGt                 >  3:181472/1‑149 (MQ=255)                                                                                                                                     tCGGCCCCTTCTGCGCACCAGCCGCAAGCGAAAGGCTGGCCGATGTGTTGCGCACGTTGTGCCGGGTCGAGCACCCAGGGGCGTGCCTGCCACGGCGGCTGGTGGCGCAGGTGCTGGGTATGGCCGCACGAAAGTTCCGCCACCCAGTg                <  4:300174/149‑1 (MQ=255)                                                                                                                                       ggCCCCTTGTGCGCACCAGCCGCAAGCGAAAGGCTGGCCGATGTGTTGCGCACGTTGTGCCGGGTCGAGCACCCAGGGGCGTGCCTGCCACGGCGGCTGGTGGTGCAGGTGCTGGGTATGGCCGCACGAAAGTTCCGCCACCCAGTGGc              >  2:122893/1‑149 (MQ=255)                                                                                                                                        gCCCCTTGTGCGCACCAGCCGCAAGCGAAAGGCTGGCCGATGTGTTGCGCACGTTGTGCCGGGTCGAGCACCCAGGGGCGTGCCTGCCACGGCGGCTGGTGGCGCAGGTGCTGGGTATGGCCGCACGAAAGTTCCg                          >  3:162553/1‑136 (MQ=255)                                                                                                                                        gCCCCTTGTGCGCACCAGCCGCAAGCGAAAGGCTGGCCGATGTGTTGCGCACGTTGTGCCGGGTCGAGCACCCAGGGGCGTGCCTGCCACGGCGGCTGGTGGCGCAGGTGCTGGGTATGGCCGCACGAAAGTTCCg                          <  4:162553/136‑1 (MQ=255)                                                                                                                                        gCCCCTTGTGCGCACCAGCCGCAAGCGAAAGGCTGGCCGATGTGTTGCGCACGTTGTGCCGGGTCGAGCACCCAGGGGCGTGCCTGCCACGGCGGCTGGTGGCGCAGGTGCTGGGTATGGCCGCACGAAAGTTCCGCCACCCAGTGGcc             <  7:288763/149‑1 (MQ=255)                                                                                                                                          cccTTGTGCGCACCAGCCGCAAGCGAAAGGCTGGCCGATGTGTTGCGCACGTTGTGCCGGGTCGAGCACCCAGGGGCGTGCCTGCCACGGCGGCTGGTGGCGCAGGTGCTGGGTATGGCCGCACGAAAGTTCCGCCACCCAGTGGCctt           <  1:43509/149‑1 (MQ=255)                                                                                                                                               gtgCGCACCAGCCGCAAGCGAAAGGCTGGCCGATGTGTTGCGCACGTTGTGCCGGGTCGAGCACCCAGGGGCGTGCCTGCCACGGCGGCTGGTGGCGCAGGTGCTGGGTATGGCCGCACGAAAGTTCCGCCACCCAGTGGCCttcttc       <  2:359456/148‑1 (MQ=255)                                                                                                                                                   gcACCAGCCGCAAGCGAAAGGCTGGCCGATGTGTTGCGCACGTTGTGCCGGGTCGAGCACCCAGGGGCGTGCCTGCCACGGCGGCTGGTGGCGCAGGTGCTGGGTATGGCCGCACGAAAGTTCCGCCACCCAGTGGCCTTCTTCGTCCt  >  3:233423/1‑149 (MQ=255)                                                                                                                                                    |                                                                                                                                                    CCAAGGTGCGCACCAGGCCCAGGCTGATCGAAGTCAGGCCGACACCAAAGTCGGTCGGCGCAATGAAAAATGTCTGCATGCGTGCTTCTCGAAATAAGCGGTGCAAGAAATTAGCGGTCAAGGGTAGCGCTATCGGCCCCTTGTGCGCACCAGCCGCAAGCGAAAGGCTGGCCGATGTGTTGCGCACGTTGTGCCGGGTCGAGCACCCAGGGGCGTGCCTGCCACGGCGGCTGGTGGCGCAGGTGCTGGGTATGGCCGCACGAAAGTTCCGCCACCCAGTGGCCTTCTTCGTCCT  >  NC_002947/893636‑893930

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.