New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	973460 =	41 (0.690)	4 (0.070)	4/236	NT	9.8%	coding (1752/1863 nt)	secD	protein translocase subunit SecD
	?	NC_002947	973515 =	36 (0.660)					coding (1807/1863 nt)	secD	protein translocase subunit SecD

ATTGCGCACACCCATGAAATTGATGGTTTTCATCGCAGCTCCCTCAAACCCACAGCTTCTTGATGTCACGCCCGCCACAGGTCAGGTTGACCAATGCACGGGTCACCATGACGGCGGTGAACATCGAGGTGAAAATCCCGAGGGACATGGTGACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/973614‑973460 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑catggtgaccCGTGCATTGGTCAACCTGACCTGTGGCGGGCGTGACATCAAGAAGCTGTGGGTTTGAGGGAGCTGCGATGAAAACCATCAATTTCATGGGTGTGCGCAATGTCGCGTTCGCCGTCACCGTGCTCCTCACCGTGTTGGCGCTGTTCAGC  >  NC_002947/973515‑973662                                                                                                                                                                                                                                                                                                                 ATTGCGCACACCCATGAAATTGATGGTTTTCATCGCAGCTCCCTCAAACCCACAGCTTCTTGATGTCACGCCCGCCACAGGTCAGGTTGACCAATGCACGGGTCACCATGACGGCGGAGAACATCGAGGTGAAAATCCCGAGGGACATG                                                                                                                                                            <  6:149530/149‑1    GCGCACACCCATGAAATTGATGGTTTTCATCGCAGCTCCCTCAAACCCACAGCTTCTTCATGTCACGCCCGCCACAGTTCAGGTTGACCAATGCACGGGTCACCATGACGGCGGTGAACATCGAGGTGAAAATCCCGAGGGACATGGT                                                                                                                                                          <  5:272640/148‑1     CGCACACCCATGAAATTGATGGTTTTCATCGCAGCTCCCTCAAACCCACAGCTTCTTGATGTCACGCCCGCCACAGGTCAGGTTGACCAATGCACGGGTCACCATGACGGCGGTGAACATCGAGGTGAAAATCCCGAGGGACATGGTGA                                                                                                                                                        >  4:252486/1‑149       CACACCCATGAAATTGATGGTTTCCATCGCAGCTCCCTCAAACCCACAGCTTCTTGATGTCACGCCCGCCACAGGTCAGGTTGACCAATGCACGGGTCACCATGACGGCGGTGAACATCGAGGTGAAAATCCCGAGGGACATGGTGACC                                                                                                                                                      <  1:214096/149‑1          ACCCATGAAATTGATGGTTTTCATCGCAGCTCCCTCAAACCCACAGCTTCTTGATGTCACGCCCGCCACAGGTCAGGTTGACCAATGCACGGGTCACCATGACGGCGGTGAACATCGAGGTGAAAATCCCGAGGGAC                                                                                                                                                               >  1:256146/1‑137          ACCCATGAAATTGATGGTTTTCATCGCAGCTCCCTCAAACCCACAGCTTCTTGATGTCACGCCCGCCACAGGTCAGGTTGACCAATGCACGGGTCACCATGACGGCGGTGAACATCGAGGTGAAAATCCCGAGGGAC                                                                                                                                                               <  2:256146/137‑1                                                                                                     GGTCACCATGACGGCGGTGAACATCGAGGTGAAAATCCCGAGGGACATGGTGACCCGTGCATTGGTCAACCTGACCTGTGGCGGGAGTGACATCAAGAAGCTGTGGGTTTGAGGGAGCTGCGATGAAAACCATCAATTTCATGCGTGTG                                                        >  7:224064/1‑149                                                                                                            ATGACGGCGGTGAACATCGAGGTGAAAATCCCGAGGGACATGGTGACCCGTGCATTGGTCAACCTGACCTGTGGCGGGCGTGACATCAAGAAGCTGTGGGTTTGAGGGAGCTGCGATGAAAACCATCAAT                                                                    <  3:6650/130‑1                                                                                                            ATGACGGCGGTGAACATCGAGGTGAAAATCCCGAGGGACATGGTGACCCGTGCATTGGTCAACCTGACCTGTGGCGGGCGTGACATCAAGAAGCTGTGGGTTTGAGGGAGCTGCGATGAAAACCATCAAT                                                                    >  4:6650/1‑130                                                                                                                                     AAATCCCGAGTGACATTGTGTCCCGTGCATTGGTCAACCTGACCTGTGGCGGGCGTGACATGAAGAAGCTGTGGGTTTGAGGTAGCTGCGATGAAAACCATCAATTTCATGGGTGTGCGCAATGTCGCGTTCGCCGTCACCGTGCTCC                         <  8:224064/148‑1                                                                                                                                                  CATGGTGACCCGTGCATTGGTCAACCTGACCTGTGGCGGGCGTGACATCAAGAAGCTGTGGGTTTGAGGGAGCTGCGATGAAAACCATCAATTTCATGGGTGTGCGCAATGTCGCGTTCGCCGTCACCGTGCTCCTCACCGTGTTGGCG           >  2:47138/1‑149                                                                                                                                                         ACCCGTGCATTGGTCAACCTGACCTGTGGCGGGCGTGACATCAAGAAGCTGTGGGTTTGAGGGATCTGGGATGAAAAGCATCAATTTCATGGGTGTGCGCAATGTCGCGTTCGCCGTCACCGTGCTCCTCACCGTGTTGGCGCTGTTC     <  5:319047/148‑1                                                                                                                                                           CCGTGCATTTGTCAACCTGACCTGTGGCGGGCGTGACATCAAGAAGCTGTGGGTTTGAGGGAGCTGCGATGAAAACCATCAATTTCATGGGTGTGCGCAATGTCGCGTTCGCCGTCACCGTGCTCCTCACCGTGTTGGCGCTGTTCAGC  >  4:281847/1‑149                                                                                                                                                                                                                                                                                                                 ATTGCGCACACCCATGAAATTGATGGTTTTCATCGCAGCTCCCTCAAACCCACAGCTTCTTGATGTCACGCCCGCCACAGGTCAGGTTGACCAATGCACGGGTCACCATGACGGCGGTGAACATCGAGGTGAAAATCCCGAGGGACATGGTGACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/973614‑973460 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑catggtgaccCGTGCATTGGTCAACCTGACCTGTGGCGGGCGTGACATCAAGAAGCTGTGGGTTTGAGGGAGCTGCGATGAAAACCATCAATTTCATGGGTGTGCGCAATGTCGCGTTCGCCGTCACCGTGCTCCTCACCGTGTTGGCGCTGTTCAGC  >  NC_002947/973515‑973662

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.