New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 1344312 = | 50 (0.850) | 4 (0.070) | 4/246 | NT | 8.3% | coding (806/972 nt) | dctP | TRAP dicarboxylate transporter subunit DctP |
? | NC_002947 | 1344341 = | 40 (0.700) | coding (777/972 nt) | dctP | TRAP dicarboxylate transporter subunit DctP |
CACACTCACGGGTCACCTGATCCTCCCGGAGCCGGTAGTGATGTCCAAGACCACCTGGAACAAGCTCAGCCCCGAGCAGCAGGCGCTGGTGAAGAAGGTTGCGCGTGAAGCACAGATGGAAGAGCGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1344440‑1344312 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcgcAACCTTCTTCACCAGCGCCTGCTGCTCGGGGCTGAGCTTGTTCCAGGTGGTCTTGGACATCACTACCGGCTCCGGGAGGATCAGGTGACCCGTGAGTGTGTAGTACTTGGCGCTCTGGAAGTGGTTGTGCTCAA > NC_002947/1344341‑1344474 CACACTCACGGGTCACCTGATCCTCCCGGAGCCGGTAGTGATGTCCAAGACCACCTGGAACAAGCTCAGCCCCGAGCAGCAGGCGCTGGTGAAGAAGGTTGCGCGTGAAGCACAGATGGAAGAGCGCGC < 1:178563/129‑1 CACACTCACGGGTCACCTGATCCTCCCGGAGCCGGTAGTGATGTCCAAGACCACCTGGAACAAGCTCAGCCCCGAGCAGCAGGCGCTGGTGAAGAAGGTTGCGCGTGAAGCACAGATGGAAGAGCGCGC > 2:178563/1‑129 GTGAAGAAGGTTGCGCGTGAAGCACAGATGGAAGAGCGCGCAACCTTCTTCACCAGCGCCTGCTGCTCGGGGCTGAGCTTGTTCCAGGTGGTCTTGGACATCACTACCGGCTCCGGGAGGATCAGGTGACCCGTGAGTGTGTAGTACTT > 6:122858/1‑149 TGCGCGTGAAGCACAGATGGAAGAGCGCGCAACCTTCTTCACCAGCGCCTGCTGCTCGGGGCTGAGCTTGTTCCAGGTGGTCTTGGACATCACTACCGGCTCCGG < 1:201726/105‑1 TGCGCGTGAAGCACAGATGGAAGAGCGCGCAACCTTCTTCACCAGCGCCTGCTGCTCGGGGCTGAGCTTGTTCCAGGTGGTCTTGGACATCACTACCGGCTCCGG > 2:201726/1‑105 GATGGAAGAGCGCGCAACCTTCTTCACCAGCGCCTGCTGCTCGGGGCTGAGCTTGTTCCAGGTGGTCTTGGACATCACTACCGGCTCCGGGAGGATCAGGTGACCCGTGAGTGTGTAGTACTTGGCGCTCTGGAAGTGGTTGTGCTCAA < 5:122858/149‑1 CACACTCACGGGTCACCTGATCCTCCCGGAGCCGGTAGTGATGTCCAAGACCACCTGGAACAAGCTCAGCCCCGAGCAGCAGGCGCTGGTGAAGAAGGTTGCGCGTGAAGCACAGATGGAAGAGCGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1344440‑1344312 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcgcAACCTTCTTCACCAGCGCCTGCTGCTCGGGGCTGAGCTTGTTCCAGGTGGTCTTGGACATCACTACCGGCTCCGGGAGGATCAGGTGACCCGTGAGTGTGTAGTACTTGGCGCTCTGGAAGTGGTTGTGCTCAA > NC_002947/1344341‑1344474 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |