New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	1344312 =	50 (0.850)	4 (0.070)	4/246	NT	8.3%	coding (806/972 nt)	dctP	TRAP dicarboxylate transporter subunit DctP
	?	NC_002947	1344341 =	40 (0.700)					coding (777/972 nt)	dctP	TRAP dicarboxylate transporter subunit DctP

CGTACCGAAGCCGTGGCGTCGTAGAACGGCTTCTTGTCGACGGTAATGAACTCGACACCGGCGGCCTTGAGCTTCTCTTCGCTGGCGGCAGACTTGGCGTCCCACAGCGCGCGCTCTTCCATCTGTGCTTCACGCGCAACCTTCTTCACCAGCGCCTGCTGCTCGGGGCTGAGCTTGTTCCAGGTGGTCTTGGACATCACTACCGGCTCCGGGAGGATCAGGTGACCCGTGAGTGTGTAGTACTTGGCGCTCTGGAAGTGGTTGTGCTCAAGCAGCGTG  >  NC_002947/1344204‑1344482                                                                                                                                          |                                                                                                                                              cgTACCGAAGCCGTGGCGTCGTAGAACGGCTTCTTGTCGACGGTAATGAACTCGACACCGGCGGCCTTGAGCTTCTCTTCGCTGGCGGCAGACTTGGCGTCCCACAGCGCGCGCTCTTCCATCTGTGCTTCACGCGCAACCTTCTTCAc                                                                                                                                    >  8:14325/1‑149 (MQ=255) aagtactacacactcacgggtcacctgatcctcccggagccggtagtgatgtccaagaccacctggaacaagctcagccccgagcagcaggcgctggtgaagaaggttGCGCGCTCTTCCATCTGTGCTTCACGCGCAACCTTCTTCAc                                                                                                                                    >  6:122858‑M1/109‑149 (MQ=255)      cGAAGCCGTGGCGTCGTAGAACGGCTTCTTGTCGACGGTAATGAACTCGACACCGGCGGCCTTGAGCTTCTCTTCGCTGGCGGCAGACTTGGCGTCCCACAGCGCGCGCTCTTCCATCTGTGCTTCACGCGCAACCTTCTTCACCAgcg                                                                                                                               >  3:165430/1‑149 (MQ=255)          gCCGTGGCGTCGTAGAACGGCTTCTTGTCGACGGTAATGAACTCGACACCGGCGGCCTTGAGCTTCTCTTCGCTGGCGGCAGACTTGGCGTCCCACAGCGCGCGCTCTTCCATCTGTGCTTCACGCGCAACCTTCTTCACCAGCGCctg                                                                                                                           <  7:14325/149‑1 (MQ=255)                     gtAGAACGGCTTCTTGTCGACGGTAATGAACTCGACACCGGCGGCCTTGAGCTTCTCTTCGCTGGCGGCAGACTTGGCGTCCCACAGCGCGCGCTCTTCCATCTGTGCTTCACGCGCAACCTTCTTCACCAGCGCCTGCTGCTCgggg                                                                                                                 <  4:165430/148‑1 (MQ=255)                       aGAACGGCTTCTTGTCGACGGTAATGAACTCGACACCGGCGGCCTTGAGCTTCTCTTCGCTGGCGGCAGACTTGGCGTCCCACAGCGCGCGCTCTTCCATCTGTGCTTCACGCGCAACCTTCTTCACCAGCGCCTGCTGCTCGGGGCt                                                                                                               >  7:7952/1‑148 (MQ=255)                        gAACGGCTTCTTGTCGACGGTAATGAACTCGACACCGGCGGCCTTGAGCTTCTCTTCGCTGGCGGCAGACTTGGCGTCCCACAGCGCGCGCTCTTCCATCTGTGCTTCACGCGCAACCTTCTTCACCAGCGCCTGCTGCTCGGGGCt                                                                                                               >  4:295504/1‑147 (MQ=255)                          aCGGCTTCTTGTCGACGGTAATGAACTCGACACCGGCGGCCTTGAGCTTCTCTTCGCTGGCGGCAGACTTGGCGTCCCACAGCGCGCGCTCTTCCATCTGTGCTTCACGCGCAACCTTCTTCACCAGCGCCTGCTGCTCGGGGCTGAGc                                                                                                           <  6:137161/149‑1 (MQ=255)                                  ccggagccggtagtgatgtccaagaccacctggaacaagctcagccccgagcagcaggcgctggtgaagaaggttGCGCGCTCTTCCATCTGTGCTTCACGCGCa                                                                                                                                               <  1:201726‑M1/30‑1 (MQ=255)                                  ccggagccggtagtgatgtccaagaccacctggaacaagctcagccccgagcagcaggcgctggtgaagaaggttGCGCGCTCTTCCATCTGTGCTTCACGCGCa                                                                                                                                               >  2:201726‑M1/76‑105 (MQ=255)                                    gTCGACGGTAATGAACTCGACACCGGCGGCCTTGAGCTTCTCTTCGCTGGCGGCAGACTTGGCGTCCCACAGCGCGCGCTCTTCCATCTGTGCTTCACGCGCAACCTTCTTCACCAGCGCCTGCTGCTCGGGGCTGAGCTTGTTcc                                                                                                    <  8:7952/146‑1 (MQ=255)                                    gTCGACGGTAATGAACTCGACACCGGCGGCCTTGAGCTTCTCTTCGCTGGCGGCAGACTTGGCGTCCCACAGCGCGCGCTCTTCCATCTGTGCTTCACGCGCAACCTTCTTCACCAGCGCCTGCTGCTCGGGGCTGAGCTTGTTCCAgg                                                                                                 >  5:341405/1‑149 (MQ=255)                                     tCGACGGTAATGAACTCGACACCGGCGGCCTTGAGCTTCTCTTCGCTGGCGGCAGACTTGGCGTCCCACAGCGCGCGCTCTTCCATCTGTGCTTCACGCGCAACCTTCTTCACCAGCGCCTGCTGCTCGGGGCTGAGCTTGTTCCAg                                                                                                  >  6:291815/1‑147 (MQ=255)                                     tCGACGGTAATGAACTCGACACCGGCGGCCTTGAGCTTCTCTTCGCTGGCGGCAGACTTGGCGTCCCACAGCGCGCGCTCTTCCATCTGTGCTTCACGCGCAACCTTCTTCACCAGCGCCTGCTGCTCGGGGCTGAGCTTGTTCCAg                                                                                                  <  5:291815/147‑1 (MQ=255)                                       gACGGTAATGAACTCGACACCGGCGGCCTTGAGCTTCTCTTCGCTGGCGGCAGACTTGGCGTCCCACAGCGCGCGCTCTTCCATCTGTGCTTCACGCGCAACCTTCTTCACCAGCGCCTGCTGCTCGGGGCTGAGc                                                                                                           <  8:29623/136‑1 (MQ=255)                                                    tCGACACCGGCGGCCTTGAGCTTCTCTTCGCTGGCGGCAGACTTGGCGTCCCACAGCGCGCGCTCTTCCATCTGTGCTTCACGCGCAACCTTCTTCACCAGCGCCTGCTGCTCGGGGCTGAGCtt                                                                                                         >  1:163023/1‑125 (MQ=255)                                                    tCGACACCGGCGGCCTTGAGCTTCTCTTCGCTGGCGGCAGACTTGGCGTCCCACAGCGCGCGCTCTTCCATCTGTGCTTCACGCGCAACCTTCTTCACCAGCGCCTGCTGCTCGGGGCTGAGCtt                                                                                                         <  2:163023/125‑1 (MQ=255)                                                    tCGACACCGGCGGCCTTGAGCTTCTCTTCGCTGGCGGCAGACTTGGCGTCCCACAGCGCGCGCTCTTCCATCTGTGCTTCACGCGCAACCTTCTTCACCAGCGCCTGCTGCTCGGGGCTGAGCTTGTTCCAGGTGGTCTTGGACATCAc                                                                                 >  1:148851/1‑149 (MQ=255)                                                    tCGACACCGGCGGCCTTGAGCTTCTCTTCGCTGGCGGCAGACTTGGCGTCCCACAGCGCGCGCTCTTCCATCTGTGCTTCACGCGCAACCTTCTTCACCAGCGCCTGCTGCTCGGGGCTGAGCTTGTTCCAGGTGGTCTTGGACATCAc                                                                                 >  1:165292/1‑149 (MQ=255)                                                         acCGGCGGCCTTGAGCTTCTCTTCGCTGGCGGCAGACTTGGCGTCCCACAGCGCGCGCTCTTCCATCTGTGCTTCACGCGCAACCTTCTTCACCAGCGCCTGCTGCTCGGGGCt                                                                                                               <  3:77240/114‑1 (MQ=255)                                                         acCGGCGGCCTTGAGCTTCTCTTCGCTGGCGGCAGACTTGGCGTCCCACAGCGCGCGCTCTTCCATCTGTGCTTCACGCGCAACCTTCTTCACCAGCGCCTGCTGCTCGGGGCt                                                                                                               >  4:77240/1‑114 (MQ=255)                                                          ccGGCGGCCTTGAGCTTCTCTTCGCTGGCGGCAGACTTGGCGTCCCACAGCGCGCGCTCTTCCATCTGTGCTTCACGCGCAACCTTCTTCACCAGCGCCTGCTGCTCGGGGCTGAGCTTGTTCCAGGTGGTCTTGGACATCACTACCgg                                                                           >  3:360144/1‑149 (MQ=255)                                                              cggcCTTGAGCTTCTCTTCGCTGGCGGCAGACTTGGCGTCCCACAGCGCGCGCTCTTCCATCTGTGCATCACGCGCAACCTTCTTCACCAGCGCCTGCTGCTCGGGGCTGAGCTTGTTCCAGGTGGTCTTGGACATCACTACCGGCTcc                                                                       <  2:169855/149‑1 (MQ=255)                                                                  cTTGAGCTTCTCTTCGCTGGCGGCAGACTTGGCGTCCCACAGCGCGCGCTCTTCCATCTGTGCTTCACGCGCAACCTTCTTCACCAGCGCCTGCTGCTCGGGGCTGAGCTTGTTCCAGGTGGTCTTGGACATCACTACCGGCTCCGgga                                                                   <  1:29617/149‑1 (MQ=255)                                                                  cTTGAGCTTCTCTTCGCTGGCGGCAGACTTGGCGTCCCACAGCGCGCGCTCTCCCATCTGTGCTTCACGCGCAACCTTCTTCACCAGCGCCTGCTGCTCGGGGCTGAGCTTGTTCCAGGTGGTCTTGGACATCACTACCGGCTCCgg                                                                     >  2:31578/1‑147 (MQ=255)                                                                     gAGCTTCTCTTCGCTGGCGGCAGACTTGGCGTCCCACAGCGCGCGCTCTTCCATCTGTGCTTCACGCGCAACCTTCTTCACCAGCGCCTGCTGCTCGGGGCTGAGCTTGTTCCAGGTGGTCTTGGACATCACTACCGGCTCCGggag                                                                  <  8:324290/147‑1 (MQ=255)                                                                     gAGCTTCTCTTCGCTGGCGGCAGACTTGGCGTCCCACAGCGCGCGCTCTCCCATCTGTGCTTCACGCGCAACCTTCTTCACCAGCGCCTGCTGCTCGGGGCTGAGCTTGTTCCAGGTCGTCTTGGACATCACTACCGGCTCCGggagg                                                                 <  1:31578/148‑1 (MQ=255)                                                                             ctTCGCTGGCGGCAGACTTGGCGTCCCACAGCGCGCGCTCTTCCATCTGTGCTTCACGCGCAACCTTCTTCACCAGCGCCTGCTGCTCGGGGCTGAGCTTGTTCCAggtg                                                                                               >  5:56740/1‑110 (MQ=255)                                                                             ctTCGCTGGCGGCAGACTTGGCGTCCCACAGCGCGCGCTCTTCCATCTGTGCTTCACGCGCAACCTTCTTCACCAGCGCCTGCTGCTCGGGGCTGAGCTTGTTCCAggtg                                                                                               <  6:56740/110‑1 (MQ=255)                                                                              ttCGCTGGCGGCAGACTTGGCGTCCCACAGCGCGCGCTCTTCCATCTGTGCTTCACGCGCAACCTTCTTCACCAGCGCCTGCTGCTCGGGGCTGAGCTTGTTCCAGGTGGTCTTGGACATCACTACCGGCTCCGGGAGGATCAg                                                            <  8:76632/144‑1 (MQ=255)                                                                              ttCGCTGGCGGCAGACTTGGCGTCCCACAGCGCGCGCTCTTCCATCTGTGCTTCACGCGCAACCTTCTTCACCAGCGCCTGCTGCTCGGGGCTGAGCTTGTTCCAGGTGGTCTTGGACATCACTACCGGCTCCGGGAGGATCAg                                                            >  7:76632/1‑144 (MQ=255)                                                                                  cTGGCGGCAGACTTGGCGTCCCACAGCGCGCGCTCTTCCATCTGTGCTTCACGCGCAACCTTCTTCACCAGCGCCTGCTGCTCGGGGCTGAGCTTGTTCCAGGTGGTCTTGGACATCAc                                                                                 >  4:257436/1‑119 (MQ=255)                                                                                  cTGGCGGCAGACTTGGCGTCCCACAGCGCGCGCTCTTCCATCTGTGCTTCACGCGCAACCTTCTTCACCAGCGCCTGCTGCTCGGGGCTGAGCTTGTTCCAGGTGGTCTTGGACATCAc                                                                                 <  3:257436/119‑1 (MQ=255)                                                                                   tGGCGGCAGACTTGGCGTCCCACAGCGCGCGCTCTTCCATCTGTGCTTCACGCGCAACCTTCTTCACCAGCGCCTGCTGCTCGGGGCTGAGCTTGTTCCAGGTGGTCTTGGACATCACTACCGGCTCCgg                                                                     >  6:143392/1‑130 (MQ=255)                                                                                   tGGCGGCAGACTTGGCGTCCCACAGCGCGCGCTCTTCCATCTGTGCTTCACGCGCAACCTTCTTCACCAGCGCCTGCTGCTCGGGGCTGAGCTTGTTCCAGGTGGTCTTGGACATCACTACCGGCTCCgg                                                                     <  5:143392/130‑1 (MQ=255)                                                                                     gcggcAGACTTGGCGTCCCACAGCGCGCGCTCTTCCATCTGTGCTTCACGCGCAACCTTCTTCACCAGCGCCTGCTGCTCGGGGCTGAGCTTGTTCCAGGTGGTCTTGGACATCACTACCGGCTCCGGGAGGATCAGGTGACCCGTGa                                                 <  2:242610/148‑1 (MQ=255)                                                                                      cggcAGACTTGGCGTCCCACAGCGCGCGCTCTTCCATCTGTGCTTCACGCGCAACCTTCTTCACCAGCGCCTGCTGCTCGGGGCTGAGCTTGTTCCAGGTGGTCTTGGACATCACTACCGGCTCCGGGAGGATCAGGTGACCCGTGAgt                                               <  2:165292/149‑1 (MQ=255)                                                                                           gACTTGGCGTCCCACAGCGCGCGCTCTTCCATCTGTGCTTCACGCGCAACCTTCTTCACCAGCGCCTGCTGCTCGGGGCTGAGCTTGTTCCAGGTGGTCTTGGACATCACTACCGGCTCCGGGAGGATCAGGTGACCCGTGAGTGTgta                                          <  3:295504/149‑1 (MQ=255)                                                                                                ggCGTCCCACAGCGCGCGCTCTTCCATCTGTGCTTCACGCGCAACCTTCTTCACCAGCGCCTGCTGCTCGGGGCTGAGCTTGTTCCAGGTGGTCTTGGACATCACTACCGGCTCCGGGAGGATCAGGTGAc                                                       <  7:248399/131‑1 (MQ=255)                                                                                                ggCGTCCCACAGCGCGCGCTCTTCCATCTGTGCTTCACGCGCAACCTTCTTCACCAGCGCCTGCTGCTCGGGGCTGAGCTTGTTCCAGGTGGTCTTGGACATCACTACCGGCTCCGGGAGGATCAGGTGAc                                                       >  8:248399/1‑131 (MQ=255)                                                                                                 gtgaagaaggttgcgcgtgaagcacagatggaagagcgcgcAACCTTCTTCACCAGCGCCTGCTGCTCGGGGCTGAGCTTGTTCCAGGTGGTCTTGGACATCACTACCGGCTCCGGGAGGATCAGGTGACCCGTGAGTGTGTAGTACtt                                    >  6:122858‑M2/42‑149 (MQ=255)                                                                                                        acaGCGCGCGCTCTTCCATCTGTGCTTCACGCGCAACCTTCTTCACCAGCGCCTGCTGCTCGGGGCTGAGCTTGTTCCAGGTGGTCTTGGACATCACTACCGGCTCCGGGAGGATCAGGTGACCCGTGAGTGTGTAGTACTTGGCGctc                             >  7:297305/1‑149 (MQ=255)                                                                                                            tgcgcgtgaagcacagatggaagagcgcgcAACCTTCTTCACCAGCGCCTGCTGCTCGGGGCTGAGCTTGTTCCAGGTGGTCTTGGACATCACTACCGGCTCCgg                                                                     <  1:201726‑M2/75‑1 (MQ=255)                                                                                                            tgcgcgtgaagcacagatggaagagcgcgcAACCTTCTTCACCAGCGCCTGCTGCTCGGGGCTGAGCTTGTTCCAGGTGGTCTTGGACATCACTACCGGCTCCgg                                                                     >  2:201726‑M2/31‑105 (MQ=255)                                                                                                             GCGCGCTCTTCCATCTGTGCTTCACGCGCAACCTTCTTCACCAGCGCCTGCTGCTCGGGGCTGAGCTTGTTCCAGGTGGTCTTGGACATCACTACCGGCTCCGGGAGGATCAGGTGACCCGTGAgtgtg                                            >  2:178563‑M1/1‑129 (MQ=255)                                                                                                             GCGCGCTCTTCCATCTGTGCTTCACGCGCAACCTTCTTCACCAGCGCCTGCTGCTCGGGGCTGAGCTTGTTCCAGGTGGTCTTGGACATCACTACCGGCTCCGGGAGGATCAGGTGACCCGTGAgtgtg                                            <  1:178563‑M1/129‑1 (MQ=255)                                                                                                                     ttCCATCTGTGCTTCACGCGCAACCTTCTTCCCCAGCGCCTGCTGCTCGGGGCTGAGCTTGTTCCAGGGGGTCTTGGACATCACTACCGGCTCCGGGAGGATCAGGTGACCCGTGAGTGTGTAGTACTTGGCGCTCTGGAAGTGGtt                  <  6:298666/147‑1 (MQ=255)                                                                                                                     ttCCATCTGTGCTTCACGCGCAACCTTCTTCACCAGCGCCTGCTGCTCGGGGCTGAGCTTGTTCCAGGTGGTCTTGGACATCACTACCGGCTCCGGGAGGATCAGGTGACCCGTGAGTGTGTAGTACTTGGCGCTCTGGAAGTGGtt                  <  6:341405/147‑1 (MQ=255)                                                                                                                           gatggaagagcgcgcAACCTTCTTCACCAGCGCCTGCTGCTCGGGGCTGAGCTTGTTCCAGGTGGTCTTGGACATCACTACCGGCTCCGGGAGGATCAGGTGACCCGTGAGTGTGTAGTACTTGGCGCTCTGGAAGTGGTTGTGCTCaa          <  5:122858‑M2/134‑1 (MQ=255)                                                                                                                                   cACGCGCAACCTTCTTCACCAGCGCCTGCTGCTCGGGGCTGAGCTTGTTCCAGGTGGTCTTGGACATCACTACCGGCTCCGGGAGGATCAGGTGACCCGTGAGTGTGTAGTACTTGGCGCTCTGGAAGTGGTTGTGCTCAAGCAGCGTg  >  3:10037/1‑149 (MQ=255)                                                                                                                                          |                                                                                                                                              CGTACCGAAGCCGTGGCGTCGTAGAACGGCTTCTTGTCGACGGTAATGAACTCGACACCGGCGGCCTTGAGCTTCTCTTCGCTGGCGGCAGACTTGGCGTCCCACAGCGCGCGCTCTTCCATCTGTGCTTCACGCGCAACCTTCTTCACCAGCGCCTGCTGCTCGGGGCTGAGCTTGTTCCAGGTGGTCTTGGACATCACTACCGGCTCCGGGAGGATCAGGTGACCCGTGAGTGTGTAGTACTTGGCGCTCTGGAAGTGGTTGTGCTCAAGCAGCGTG  >  NC_002947/1344204‑1344482

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.