New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	1344312 =	50 (0.850)	4 (0.070)	4/246	NT	8.3%	coding (806/972 nt)	dctP	TRAP dicarboxylate transporter subunit DctP
	?	NC_002947	1344341 =	40 (0.700)					coding (777/972 nt)	dctP	TRAP dicarboxylate transporter subunit DctP

CTTCATCAGGTCGGCGTACTGCGCGCCGTATTTTTCGCGTACCGAAGCCGTGGCGTCGTAGAACGGCTTCTTGTCGACGGTAATGAACTCGACACCGG‑CGGCCTTGAGCTTCTCTTCGCTGGCGGCAGACTTGGCGTCCCACAGCGCGCGCTCTTCCATCTGTGCTTCACGCGCAACCTTCTTCACCAGCGCCTGCTGCTCGGGGCTGAGCTTGTTCCAGGTGGTCTTGGACATCACTACCGGCTCCGGGAGGATCAGGTGACCCGTGAGTGTGTAGTACTTGGCGCTC  >  NC_002947/1344167‑1344455                                                                                                                                                   |                                                                                                                                                cTTCATCAGGTCGGCGTACTGCGCGCCGTATTTTTCGCGTACCGAAGCCGTGGCGTCGTAGAACGGCTTCTTGTCGACGGTAATGAACTCGACACCGG‑CGGCCTTGAGCTTCTCTTCGCTGGCGGCAGACTTGGCGTCCCACAgcgcgc                                                                                                                                              <  4:48214/149‑1 (MQ=255)    catcaGGTCGGCGTACTGCGCGCCGTATTTTTCGCGTACCGAAGCCGTGGCGTCGTAGAACGGCTTCTTGTCGACGGTAATGAACTCGACACCGG‑CGGCCTTGAGCTTCTCTTCGCTGGCGGCAGACTTGGCGTCCCACAgcgcgcgc                                                                                                                                            <  8:26014/148‑1 (MQ=255)     atcaGGTCGGCGTACTGCGCGCCGTATTTTTCGCGTACCGAAGCCGTGGCGTCGTAGAACGGCTTCTTGTCGACGGTAATGAACTCGACACCGG‑CGGCCTTGAGCTTCTCTTCGCTGGCGGCAGACTTGGCGTCCCACAGCGCGCGctc                                                                                                                                          <  5:80979/149‑1 (MQ=255)        aGGTCGGCGTACTGCGCGCCGTATTTTTCGCGTACCGAAGCCGTGGCGTCGTAGAACGGCTTCTTGTCGACGGTAATGAACTCGACACCGG‑CGGCCTTGAGCTTCTCTTCGCTGGCGGCAGACTTGGCGTCCCACAGCGCGCGCTCTTc                                                                                                                                       <  2:136615/149‑1 (MQ=255)             ttgagcacaaccacttccagagcgccaagtactacacactcacgggtcacctgatcctcccggagccggtagtgatgtccaagaccacctggaacaagctcagccccgagcagcaggcgctggtgaagaaggttGCGCGCTCTTCCATc                                                                                                                                   <  5:122858‑M1/15‑1 (MQ=255)             ggCGTACTGCGCGCCGTATTTTTCGCGTACCGAAGCCGTGGCGTCGTAGAACGGCTTCTTGTCGACGGTAATGAACTCGACACCGGCCTGCCTTGAGCTTCTCTTCGCTGGCGGCAGACTTGGCGTCCCACAGCGCGCGCTCTTCCAt                                                                                                                                    <  1:298649/148‑1 (MQ=255)                  aCTGCGCGCCGTATTTTTCGCGTACCGAAGCCGTGGCGTCGTAGAACGGCTTCTTGTCGACGGTAATGAACTCGACACCGG‑CGGCCTTGAGCTTCTCTTCGCTGGCGGCAGACTTGGCGTCCCACAGCGCGCGCTCTTCCATCTGTGCt                                                                                                                             >  7:324290/1‑149 (MQ=255)                        cgcCGTATTTTTCGCGTACCGAAGCCGTGGCGTCGTAGAACGGCTTCTTGTCGACGGTAATGAACTCGACACCGG‑CGGCCTTGAGCTTCTCTTCGCTGGCGGCAGACTTGGCGTCCCACAGCGCGCGCTCTTCCATCTGTGCTTCAcgc                                                                                                                       <  3:102624/149‑1 (MQ=255)                             tATTTTTCGCGTACCGAAGCCGTGGCGTCGTAGAACGGCTTCTTGTCGACGGTAATGAACTCGACACCGG‑CGGCCTTGAGCTTCTCTTCGCTGGCGGCAGACTTGGCGTCCCACAGCGCGCGCTCTTCCATCt                                                                                                                                  <  1:149103/133‑1 (MQ=255)                                  ttCGCGTACCGAAGCCGTGGCGTCGTAGAACGGCTTCTTGTCGACGGTAATGAACTCGACACCGG‑CGGCCTTGAGCTTCTCTTCGCTGGCGGCAGACTTGGCGTCCCACAGCGCGCGCTCTTCCATCt                                                                                                                                  >  3:42953/1‑128 (MQ=255)                                  ttCGCGTACCGAAGCCGTGGCGTCGTAGAACGGCTTCTTGTCGACGGTAATGAACTCGACACCGG‑CGGCCTTGAGCTTCTCTTCGCTGGCGGCAGACTTGGCGTCCCACAGCGCGCGCTCTTCCATCt                                                                                                                                  <  4:42953/128‑1 (MQ=255)                                      cgTACCGAAGCCGTGGCGTCGTAGAACGGCTTCTTGTCGACGGTAATGAACTCGACACCGG‑CGGCCTTGAGCTTCTCTTCGCTGGCGGCAGACTTGGCGTCCCACAGCGCGCGCTCTTCCATCTGTGCTTCACGCGCAACCTTCTTCAc                                                                                                         >  8:14325/1‑149 (MQ=255)                                       aagtactacacactcacgggtcacctgatcctcccggagccggtagtgatgtccaagaccacctggaacaagctcagccccgagcagcaggcgctggtgaagaaggttGCGCGCTCTTCCATCTGTGCTTCACGCGCAACCTTCTTCAc                                                                                                         >  6:122858‑M1/109‑149 (MQ=255)                                           cGAAGCCGTGGCGTCGTAGAACGGCTTCTTGTCGACGGTAATGAACTCGACACCGG‑CGGCCTTGAGCTTCTCTTCGCTGGCGGCAGACTTGGCGTCCCACAGCGCGCGCTCTTCCATCTGTGCTTCACGCGCAACCTTCTTCACCAgcg                                                                                                    >  3:165430/1‑149 (MQ=255)                                               gCCGTGGCGTCGTAGAACGGCTTCTTGTCGACGGTAATGAACTCGACACCGG‑CGGCCTTGAGCTTCTCTTCGCTGGCGGCAGACTTGGCGTCCCACAGCGCGCGCTCTTCCATCTGTGCTTCACGCGCAACCTTCTTCACCAGCGCctg                                                                                                <  7:14325/149‑1 (MQ=255)                                                          gtAGAACGGCTTCTTGTCGACGGTAATGAACTCGACACCGG‑CGGCCTTGAGCTTCTCTTCGCTGGCGGCAGACTTGGCGTCCCACAGCGCGCGCTCTTCCATCTGTGCTTCACGCGCAACCTTCTTCACCAGCGCCTGCTGCTCgggg                                                                                      <  4:165430/148‑1 (MQ=255)                                                            aGAACGGCTTCTTGTCGACGGTAATGAACTCGACACCGG‑CGGCCTTGAGCTTCTCTTCGCTGGCGGCAGACTTGGCGTCCCACAGCGCGCGCTCTTCCATCTGTGCTTCACGCGCAACCTTCTTCACCAGCGCCTGCTGCTCGGGGCt                                                                                    >  7:7952/1‑148 (MQ=255)                                                             gAACGGCTTCTTGTCGACGGTAATGAACTCGACACCGG‑CGGCCTTGAGCTTCTCTTCGCTGGCGGCAGACTTGGCGTCCCACAGCGCGCGCTCTTCCATCTGTGCTTCACGCGCAACCTTCTTCACCAGCGCCTGCTGCTCGGGGCt                                                                                    >  4:295504/1‑147 (MQ=255)                                                               aCGGCTTCTTGTCGACGGTAATGAACTCGACACCGG‑CGGCCTTGAGCTTCTCTTCGCTGGCGGCAGACTTGGCGTCCCACAGCGCGCGCTCTTCCATCTGTGCTTCACGCGCAACCTTCTTCACCAGCGCCTGCTGCTCGGGGCTGAGc                                                                                <  6:137161/149‑1 (MQ=255)                                                                        ccggagccggtagtgatgtccaagaccacctggaacaagctcagccccgagcagcaggcgctggtgaagaaggttGCGCGCTCTTCCATCTGTGCTTCACGCGCa                                                                                                                    <  1:201726‑M1/30‑1 (MQ=255)                                                                        ccggagccggtagtgatgtccaagaccacctggaacaagctcagccccgagcagcaggcgctggtgaagaaggttGCGCGCTCTTCCATCTGTGCTTCACGCGCa                                                                                                                    >  2:201726‑M1/76‑105 (MQ=255)                                                                         gTCGACGGTAATGAACTCGACACCGG‑CGGCCTTGAGCTTCTCTTCGCTGGCGGCAGACTTGGCGTCCCACAGCGCGCGCTCTTCCATCTGTGCTTCACGCGCAACCTTCTTCACCAGCGCCTGCTGCTCGGGGCTGAGCTTGTTcc                                                                         <  8:7952/146‑1 (MQ=255)                                                                         gTCGACGGTAATGAACTCGACACCGG‑CGGCCTTGAGCTTCTCTTCGCTGGCGGCAGACTTGGCGTCCCACAGCGCGCGCTCTTCCATCTGTGCTTCACGCGCAACCTTCTTCACCAGCGCCTGCTGCTCGGGGCTGAGCTTGTTCCAgg                                                                      >  5:341405/1‑149 (MQ=255)                                                                          tCGACGGTAATGAACTCGACACCGG‑CGGCCTTGAGCTTCTCTTCGCTGGCGGCAGACTTGGCGTCCCACAGCGCGCGCTCTTCCAt                                                                                                                                    >  6:245314/1‑86 (MQ=255)                                                                          tCGACGGTAATGAACTCGACACCGG‑CGGCCTTGAGCTTCTCTTCGCTGGCGGCAGACTTGGCGTCCCACAGCGCGCGCTCTTCCAt                                                                                                                                    <  5:245314/86‑1 (MQ=255)                                                                          tCGACGGTAATGAACTCGACACCGG‑CGGCCTTGAGCTTCTCTTCGCTGGCGGCAGACTTGGCGTCCCACAGCGCGCGCTCTTCCATCTGTGCTTCACGCGCAACCTTCTTCACCAGCGCCTGCTGCTCGGGGCTGAGCTTGTTCCAg                                                                       >  6:291815/1‑147 (MQ=255)                                                                          tCGACGGTAATGAACTCGACACCGG‑CGGCCTTGAGCTTCTCTTCGCTGGCGGCAGACTTGGCGTCCCACAGCGCGCGCTCTTCCATCTGTGCTTCACGCGCAACCTTCTTCACCAGCGCCTGCTGCTCGGGGCTGAGCTTGTTCCAg                                                                       <  5:291815/147‑1 (MQ=255)                                                                            gACGGTAATGAACTCGACACCGG‑CGGCCTTGAGCTTCTCTTCGCTGGCGGCAGACTTGGCGTCCCACAGCGCGCGCTCTTCCATCTGTGCTTCACGCGCAACCTTCTTCACCAGCGCCTGCTGCTCGGGGCTGAGc                                                                                <  8:29623/136‑1 (MQ=255)                                                                                gTAATGAACTCGACACCGG‑CGGCCTTGAGCTTCTCTTCGCTGGCGGCAGACTTGGCGTCCCACAGCGCGCGCTCTTCCATCTGTGCTTc                                                                                                                           >  1:143414/1‑89 (MQ=255)                                                                                gTAATGAACTCGACACCGG‑CGGCCTTGAGCTTCTCTTCGCTGGCGGCAGACTTGGCGTCCCACAGCGCGCGCTCTTCCATCTGTGCTTc                                                                                                                           <  2:143414/89‑1 (MQ=255)                                                                                         tCGACACCGG‑CGGCCTTGAGCTTCTCTTCGCTGGCGGCAGACTTGGCGTCCCACAGCGCGCGCTCTTCCATCTGTGCTTCACGCGCAACCTTCTTCACCAGCGCCTGCTGCTCGGGGCTGAGCtt                                                                              >  1:163023/1‑125 (MQ=255)                                                                                         tCGACACCGG‑CGGCCTTGAGCTTCTCTTCGCTGGCGGCAGACTTGGCGTCCCACAGCGCGCGCTCTTCCATCTGTGCTTCACGCGCAACCTTCTTCACCAGCGCCTGCTGCTCGGGGCTGAGCtt                                                                              <  2:163023/125‑1 (MQ=255)                                                                                         tCGACACCGG‑CGGCCTTGAGCTTCTCTTCGCTGGCGGCAGACTTGGCGTCCCACAGCGCGCGCTCTTCCATCTGTGCTTCACGCGCAACCTTCTTCACCAGCGCCTGCTGCTCGGGGCTGAGCTTGTTCCAGGTGGTCTTGGACATCAc                                                      >  1:148851/1‑149 (MQ=255)                                                                                         tCGACACCGG‑CGGCCTTGAGCTTCTCTTCGCTGGCGGCAGACTTGGCGTCCCACAGCGCGCGCTCTTCCATCTGTGCTTCACGCGCAACCTTCTTCACCAGCGCCTGCTGCTCGGGGCTGAGCTTGTTCCAGGTGGTCTTGGACATCAc                                                      >  1:165292/1‑149 (MQ=255)                                                                                              acCGG‑CGGCCTTGAGCTTCTCTTCGCTGGCGGCAGACTTGGCGTCCCACAGCGCGCGCTCTTCCATCTGTGCTTCACGCGCAACCTTCTTCACCAGCGCCTGCTGCTCGGGGCt                                                                                    <  3:77240/114‑1 (MQ=255)                                                                                              acCGG‑CGGCCTTGAGCTTCTCTTCGCTGGCGGCAGACTTGGCGTCCCACAGCGCGCGCTCTTCCATCTGTGCTTCACGCGCAACCTTCTTCACCAGCGCCTGCTGCTCGGGGCt                                                                                    >  4:77240/1‑114 (MQ=255)                                                                                               ccGG‑CGGCCTTGAGCTTCTCTTCGCTGGCGGCAGACTTGGCGTCCCACAGCGCGCGCTCTTCCATCTGTGCTTCACGCGCAACCTTCTTCACCAGCGCCTGCTGCTCGGGGCTGAGCTTGTTCCAGGTGGTCTTGGACATCACTACCgg                                                >  3:360144/1‑149 (MQ=255)                                                                                                    cggcCTTGAGCTTCTCTTCGCTGGCGGCAGACTTGGCGTCCCACAGCGCGCGCTCTTCCATCTGTGCATCACGCGCAACCTTCTTCACCAGCGCCTGCTGCTCGGGGCTGAGCTTGTTCCAGGTGGTCTTGGACATCACTACCGGCTcc                                            <  2:169855/149‑1 (MQ=255)                                                                                                        cTTGAGCTTCTCTTCGCTGGCGGCAGACTTGGCGTCCCACAGCGCGCGCTCTTCCATCTGTGCTTCACGCGCAACCTTCTTCACCAGCGCCTGCTGCTCGGGGCTGAGCTTGTTCCAGGTGGTCTTGGACATCACTACCGGCTCCGgga                                        <  1:29617/149‑1 (MQ=255)                                                                                                        cTTGAGCTTCTCTTCGCTGGCGGCAGACTTGGCGTCCCACAGCGCGCGCTCTCCCATCTGTGCTTCACGCGCAACCTTCTTCACCAGCGCCTGCTGCTCGGGGCTGAGCTTGTTCCAGGTGGTCTTGGACATCACTACCGGCTCCgg                                          >  2:31578/1‑147 (MQ=255)                                                                                                           gAGCTTCTCTTCGCTGGCGGCAGACTTGGCGTCCCACAGCGCGCGCTCTTCCATCTGTGCTTCACGCGCAACCTTCTTCACCAGCGCCTGCTGCTCGGGGCTGAGCTTGTTCCAGGTGGTCTTGGACATCACTACCGGCTCCGggag                                       <  8:324290/147‑1 (MQ=255)                                                                                                           gAGCTTCTCTTCGCTGGCGGCAGACTTGGCGTCCCACAGCGCGCGCTCTCCCATCTGTGCTTCACGCGCAACCTTCTTCACCAGCGCCTGCTGCTCGGGGCTGAGCTTGTTCCAGGTCGTCTTGGACATCACTACCGGCTCCGggagg                                      <  1:31578/148‑1 (MQ=255)                                                                                                                   ctTCGCTGGCGGCAGACTTGGCGTCCCACAGCGCGCGCTCTTCCATCTGTGCTTCACGCGCAACCTTCTTCACCAGCGCCTGCTGCTCGGGGCTGAGCTTGTTCCAggtg                                                                    >  5:56740/1‑110 (MQ=255)                                                                                                                   ctTCGCTGGCGGCAGACTTGGCGTCCCACAGCGCGCGCTCTTCCATCTGTGCTTCACGCGCAACCTTCTTCACCAGCGCCTGCTGCTCGGGGCTGAGCTTGTTCCAggtg                                                                    <  6:56740/110‑1 (MQ=255)                                                                                                                    ttCGCTGGCGGCAGACTTGGCGTCCCACAGCGCGCGCTCTTCCATCTGTGCTTCACGCGCAACCTTCTTCACCAGCGCCTGCTGCTCGGGGCTGAGCTTGTTCCAGGTGGTCTTGGACATCACTACCGGCTCCGGGAGGATCAg                                 <  8:76632/144‑1 (MQ=255)                                                                                                                    ttCGCTGGCGGCAGACTTGGCGTCCCACAGCGCGCGCTCTTCCATCTGTGCTTCACGCGCAACCTTCTTCACCAGCGCCTGCTGCTCGGGGCTGAGCTTGTTCCAGGTGGTCTTGGACATCACTACCGGCTCCGGGAGGATCAg                                 >  7:76632/1‑144 (MQ=255)                                                                                                                        cTGGCGGCAGACTTGGCGTCCCACAGCGCGCGCTCTTCCATCTGTGCTTCACGCGCAACCTTCTTCACCAGCGCCTGCTGCTCGGGGCTGAGCTTGTTCCAGGTGGTCTTGGACATCAc                                                      <  3:257436/119‑1 (MQ=255)                                                                                                                        cTGGCGGCAGACTTGGCGTCCCACAGCGCGCGCTCTTCCATCTGTGCTTCACGCGCAACCTTCTTCACCAGCGCCTGCTGCTCGGGGCTGAGCTTGTTCCAGGTGGTCTTGGACATCAc                                                      >  4:257436/1‑119 (MQ=255)                                                                                                                         tGGCGGCAGACTTGGCGTCCCACAGCGCGCGCTCTTCCATCTGTGCTTCACGCGCAACCTTCTTCACCAGCGCCTGCTGCTCGGGGCTGAGCTTGTTCCAGGTGGTCTTGGACATCACTACCGGCTCCgg                                          <  5:143392/130‑1 (MQ=255)                                                                                                                         tGGCGGCAGACTTGGCGTCCCACAGCGCGCGCTCTTCCATCTGTGCTTCACGCGCAACCTTCTTCACCAGCGCCTGCTGCTCGGGGCTGAGCTTGTTCCAGGTGGTCTTGGACATCACTACCGGCTCCgg                                          >  6:143392/1‑130 (MQ=255)                                                                                                                           gcggcAGACTTGGCGTCCCACAGCGCGCGCTCTTCCATCTGTGCTTCACGCGCAACCTTCTTCACCAGCGCCTGCTGCTCGGGGCTGAGCTTGTTCCAGGTGGTCTTGGACATCACTACCGGCTCCGGGAGGATCAGGTGACCCGTGa                      <  2:242610/148‑1 (MQ=255)                                                                                                                            cggcAGACTTGGCGTCCCACAGCGCGCGCTCTTCCATCTGTGCTTCACGCGCAACCTTCTTCACCAGCGCCTGCTGCTCGGGGCTGAGCTTGTTCCAGGTGGTCTTGGACATCACTACCGGCTCCGGGAGGATCAGGTGACCCGTGAgt                    <  2:165292/149‑1 (MQ=255)                                                                                                                                 gACTTGGCGTCCCACAGCGCGCGCTCTTCCATCTGTGCTTCACGCGCAACCTTCTTCACCAGCGCCTGCTGCTCGGGGCTGAGCTTGTTCCAGGTGGTCTTGGACATCACTACCGGCTCCGGGAGGATCAGGTGACCCGTGAGTGTgta               <  3:295504/149‑1 (MQ=255)                                                                                                                                      ggCGTCCCACAGCGCGCGCTCTTCCATCTGTGCTTCACGCGCAACCTTCTTCACCAGCGCCTGCTGCTCGGGGCTGAGCTTGTTCCAGGTGGTCTTGGACATCACTACCGGCTCCGGGAGGATCAGGTGAc                            >  8:248399/1‑131 (MQ=255)                                                                                                                                      ggCGTCCCACAGCGCGCGCTCTTCCATCTGTGCTTCACGCGCAACCTTCTTCACCAGCGCCTGCTGCTCGGGGCTGAGCTTGTTCCAGGTGGTCTTGGACATCACTACCGGCTCCGGGAGGATCAGGTGAc                            <  7:248399/131‑1 (MQ=255)                                                                                                                                              acaGCGCGCGCTCTTCCATCTGTGCTTCACGCGCAACCTTCTTCACCAGCGCCTGCTGCTCGGGGCTGAGCTTGTTCCAGGTGGTCTTGGACATCACTACCGGCTCCGGGAGGATCAGGTGACCCGTGAGTGTGTAGTACTTGGCGctc  >  7:297305/1‑149 (MQ=255)                                                                                                                                                   GCGCGCTCTTCCATCTGTGCTTCACGCGCAACCTTCTTCACCAGCGCCTGCTGCTCGGGGCTGAGCTTGTTCCAGGTGGTCTTGGACATCACTACCGGCTCCGGGAGGATCAGGTGACCCGTGAgtgtg                 <  1:178563‑M1/129‑1 (MQ=255)                                                                                                                                                   GCGCGCTCTTCCATCTGTGCTTCACGCGCAACCTTCTTCACCAGCGCCTGCTGCTCGGGGCTGAGCTTGTTCCAGGTGGTCTTGGACATCACTACCGGCTCCGGGAGGATCAGGTGACCCGTGAgtgtg                 >  2:178563‑M1/1‑129 (MQ=255)                                                                                                                                                   |                                                                                                                                                CTTCATCAGGTCGGCGTACTGCGCGCCGTATTTTTCGCGTACCGAAGCCGTGGCGTCGTAGAACGGCTTCTTGTCGACGGTAATGAACTCGACACCGG‑CGGCCTTGAGCTTCTCTTCGCTGGCGGCAGACTTGGCGTCCCACAGCGCGCGCTCTTCCATCTGTGCTTCACGCGCAACCTTCTTCACCAGCGCCTGCTGCTCGGGGCTGAGCTTGTTCCAGGTGGTCTTGGACATCACTACCGGCTCCGGGAGGATCAGGTGACCCGTGAGTGTGTAGTACTTGGCGCTC  >  NC_002947/1344167‑1344455

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.