New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	2352954 =	41 (0.690)	3 (0.050)	3/240	NT	6.9%	coding (311/1515 nt)	PP_2067	EmrB/QacA family drug resistance transporter
	?	NC_002947	2352998 =	43 (0.780)					coding (267/1515 nt)	PP_2067	EmrB/QacA family drug resistance transporter

TCTCCACCGCCTACCTGGTGGCGGAAATCGTGATGATTCCGCTGACGGCCTGGTTGGTGGACGTGTTCTCGCTGCGCCGGGTCATGTGGACCGGCTCGCTCATCTTTCTGATCGCCTCGGTGGCCTGCTCATGGGCGCCCAACCTGGAGGCGAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/2353107‑2352954 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gaggcgatCAGAAAGATGAGCGAGCCGGTCCACATGACCCGGCGCAGCGAGAACACGTCCACCAACCAGGCCGTCAGCGGAATCATCACGATTTCCGCCACCAGGTAGGCGGTG  >  NC_002947/2352998‑2353103                                                                                                                                                                                                                                                                      TCTCCACCGCCTACCTGGTGGCGGAAATCGTGATGATTCCGCTGACGGCCTGGTTGGTGGACGTGTTCTCGCTGCGCCGGGTCATGTGGACAGGCTCGCTCATCTTTCTGATAGCCTCGGTGGCCTGCTCATGGGCGCCCAACCTGGAG                                                                                                                 >  5:3491/1‑149     cagCGCCTACCTGGTGGCGGAAATCGTGATGATTCCGCTGACGGCCTGGTTGGTGGACGTGTTCTCGCTGCGCCGGGTCATGTGGACCGGCTCGCTCATCTTTCTGATCGCCTCGGTGGCCTGCTCATGGGCGCCCAACCTGGA                                                                                                                  <  3:310990/141‑1                                                                                                          TTCTGATCGCCTCGGTGGCCTGCTCATGGGCGCCCAACCTGGAGGCGATCAGAAAGATGAGCGAGCCGGTCCACATGACCCGGCGCAGCGAGAACACGTCCACCAACCAGGCCGTCAGCGGAATCATCAGGATTTCCGCCACCAGGTAG        >  3:113568/1‑149                                                                                                              GATCGCCTCGGTGGCCTGCTCATGGGCGCCCAACCTGGAGGCGATCAGAAAGATGAGCGAGCCGGTCCACATGACCCGGCGCAGCGAGAACACGTCCACCAACCAGGCCGTCAGCGGAATCATCACGATTTCCGCCACCAGGTAGGCGG    >  7:60761/1‑149                                                                                                                TCGCCTCGGTGGCCTGCTCATGGGCGCCCAACCTGGAGGCGATCAGAAAGATGAGCGAGCCGGTCCACATGACCCGGCGCAGCGAGAACACGTCCACCAACCAGGCCGTCAGCGGAATCATCACGATTTCCGCCACCAGGTAGGCGGTG  <  8:60761/149‑1                                                                                                                                                                                                                                                                      TCTCCACCGCCTACCTGGTGGCGGAAATCGTGATGATTCCGCTGACGGCCTGGTTGGTGGACGTGTTCTCGCTGCGCCGGGTCATGTGGACCGGCTCGCTCATCTTTCTGATCGCCTCGGTGGCCTGCTCATGGGCGCCCAACCTGGAGGCGAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/2353107‑2352954 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gaggcgatCAGAAAGATGAGCGAGCCGGTCCACATGACCCGGCGCAGCGAGAACACGTCCACCAACCAGGCCGTCAGCGGAATCATCACGATTTCCGCCACCAGGTAGGCGGTG  >  NC_002947/2352998‑2353103

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.