| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 2361888 | 45 (0.760) | 3 (0.050) | 3/240 | NT | 7.1% | coding (1989/2724 nt) | PP_2076 | hypothetical protein |
| ? | NC_002947 | = 2361912 | 36 (0.650) | coding (1965/2724 nt) | PP_2076 | hypothetical protein | |||||
ACCTGGTCCACATAACTGGCTCCAACTTCGAAGCCCGCCGCAGCCGTAGTCATCGCGGCCGCCAGGAGTTCGGTCTTCACCCGCGCATCACTGTCAGGCAGTTCGCGCGCTTTGAAGGCCATCAGCATCCCCTCCAGCAGGCACACTAGCCCGGAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2361733‑2361888‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcccggaaCAGTGACTTCTACAAAGTGCGTGTTTCCGGGCTAGTGTGCCTGCTGGAGGGGATGCTGATGGCCTTCAAAGCGCGCGAACTGCCTGACAGTGATGCGCGGGTGAAGACCGAACTCCTGGCGGCCGCGATGACTACGGCTGCGGCGG < NC_002947/2361912‑2361767 ACCTGGTCCACATAACTGGCTCCAACTTCGAAGCCCGCCGCAGCCGTAGTCATCGCGGCCGCCAGGAGTTCGGTCTTCACCCGCGCATCACTGTCAGGCAGTTCGCGCGCTTTGAAGGCCATCAGCATCCCCTCCAGCAGGCACACTAG > 1:136105/1‑149 CTGGTCCACATAACTGGCTCCAACTTCGAAGCCCGCCGCAGCCGTAGTCATCGCGGCCGCCAGGAGTTCGGTCTTCACCCGCGCATCACTGTCAGGCAGTTCGCGCGCTTTGAAGGCCATCAGCATCCCCTCCAGCAGGCACACTAGCC < 1:44458/149‑1 GTCCACATAACTGGCTCCAACTTCGAAGCCCGCCGCAGCCGTAGTCATCGCGGCCGCCAGGAGTTCGGTCTTCACCCGCGCATCACTGTCAGGCAGTTCGCGCGCTTTGAAGGCCATCAGCATCCCCTCCAGCAGGCACACTAGCCCG < 3:323777/148‑1 GTCCACATAACTGGCTCCAACTTCGAAGCCCGCCGCAGCCGTAGTCATCGCGGCCGCCAGGAGTTCGGTCTTCACCCGCGCATCACTGTCAGGCAGTTCGCGCGCTTTGAAGGCCATCAGCATCCCCTCCAGCAGGCACACTAGCCCG < 6:144870/148‑1 AGCCGTAGTCATCGCGGCCGCCAGGAGTTCGGTCTTCACCCGCGCATCACTGTCAGGCAGTTCGCGCGCTTTGAAGGCCATCAGCATCCCCTCCAGCAGGCACACTAGCCCGGAACAGTGACTTCTACAAAGTGCGTGTTTCCGG > 1:211042/1‑145 AGCCGTAGTCATCGCGGCCGCCAGGAGTTCGGTCTTCACCCGCGCATCACTGTCAGGCAGTTCGCGCGCTTTGAAGGCCATCAGCATCCCCTCCAGCAGGCACACTAGCCCGGAACAGTGACTTCTACAAAGTGCGTGTTTCCGG < 2:211042/145‑1 CCGTAGTCATCGCGGCCGCCAGGAGTTCGGTCTTCACCCGCGCATCACTGTCAGGCAGTTCGCGCGCTTTGAAGGCCATCAGCATCCCCTCCAGCAGGCACACTAGCCCGGAACAGTGACTTCTACAAAGTGCGTGTTTCCGGGCTAGT < 2:136105/149‑1 CGGTCTTCACCCGCGCATCACTGTCAGGCAGTTCGCGCGCTTTGAAGGCCATCAGCATCCCCTCCAGCAGGCACACTAGCCC > 3:63290/1‑82 CGGTCTTCACCCGCGCATCACTGTCAGGCAGTTCGCGCGCTTTGAAGGCCATCAGCATCCCCTCCAGCAGGCACACTAGCCC < 4:63290/82‑1 CCGGAACAGTGACTTCTACAAAGTGCGTGTTTCCGGGCTAGTGTGCCTGCTGGAGGGGATGCTGATGGCCTTCAAAGCGCGCGAACTGCCTGACAGTGATGCGCGGGTGAAGACCGAACTCCTGGCGGCCGCGATGACTACGGCTGCGG > 2:25767/1‑149 GAACAGTGACTTCTACAAAGTGCGTGTTTCCGGGCTAGTGTGCCTGCTGGAGGGGATGCTGATGGCCTTCAAAGCGCGCGAACTGCCTGACAGTGATGCGCGGGTGAAGACCGAACTCCTGGCGGCCGCGATGACTACGGCTGCGGCGG > 5:277793/1‑149 ACCTGGTCCACATAACTGGCTCCAACTTCGAAGCCCGCCGCAGCCGTAGTCATCGCGGCCGCCAGGAGTTCGGTCTTCACCCGCGCATCACTGTCAGGCAGTTCGCGCGCTTTGAAGGCCATCAGCATCCCCTCCAGCAGGCACACTAGCCCGGAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2361733‑2361888‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcccggaaCAGTGACTTCTACAAAGTGCGTGTTTCCGGGCTAGTGTGCCTGCTGGAGGGGATGCTGATGGCCTTCAAAGCGCGCGAACTGCCTGACAGTGATGCGCGGGTGAAGACCGAACTCCTGGCGGCCGCGATGACTACGGCTGCGGCGG < NC_002947/2361912‑2361767 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |