| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 2447276 | 38 (0.640) | 3 (0.050) | 3/244 | NT | 6.8% | coding (665/1011 nt) | nagZ | beta‑N‑acetylglucosaminidase |
| ? | NC_002947 | = 2447298 | 46 (0.820) | coding (687/1011 nt) | nagZ | beta‑N‑acetylglucosaminidase | |||||
GCTGGGCCGAAGCCGATTCGCACGTGGCCATCCCCACTGATGAACGCAGCCTGGAACAACTGCGCCAGTCCGACCTGGTGCCGTTTACCCGCCTGAGTGGGCAACTGGCGGCAGTGATGCCGGCGCATGTCATCTACCCGCAGGTTGACAACCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2447123‑2447276‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caaccaACGCCGCGAGAAGCCAGCGGGCTGGTTGTCAACCTGCGGGTAGATGACATGCGCCGGCATCACTGCCGCCAGTTGCCCACTCAGGCGGGTAAACGGCACCAGGTCGGACTGGCGCAGTTGTTCCAGGCTGCGTTCATCAGTGGGGAT < NC_002947/2447298‑2447152 GCTGGGCCGAAGCCGATTCGCACGTGGCCATCCCCACTGATGAACGCAGCCTGGAACAACTGCGCCAGTCCGACCTGGTGCCGTTTACCCGCCTGAGTGGGCAACTGGCGGCAGTGATGCCGGCGCATGTCATCTACCCGCAGGTTGAC < 7:42221/149‑1 CTGGGCCGAAGCCGATTCGCACGTGGCCATCCCCACTGATGAACGCAGCCTGGAACAACTGCGCCAGTCCGACCTGGTGCCGTTTACCCGCCTGAGTGGGCAACTGGCGGCAGTGATGCCGGCGCATGTCATCTACCCGCAGGTTGACA < 1:105258/149‑1 ATGAACGCAGCCTGGAACAACTGCGCCAGTCCGACCTGGTGCCGTTTACCCGCCTGAGTGGGCAACTGGCGGCAGTGATGCCGGCGCATGTCATCTACCCGCAGGTTGACAACCAACGCCGCGAGAAGCCAGCGGGCTGGTTGTCAACC < 3:376573/149‑1 CCAGTCCGACCTGGTGCCGTTTACCCGCCTGAGTGGGCAACTGGCGGCAGTGATGCCGGCGCATGTCATCTACCCGCAGGTTGACAACCAACGCCGCGAGAAGCCAGCGGGCTGGTTGT < 5:196504/119‑1 CCAGTCCGACCTGGTGCCGTTTACCCGCCTGAGTGGGCAACTGGCGGCAGTGATGCCGGCGCATGTCATCTACCCGCAGGTTGACAACCAACGCCGCGAGAAGCCAGCGGGCTGGTTGT > 6:196504/1‑119 CAACCAACGCCGCGAGAAGCCAGCGGGCTGGTTGTCAACCTGCGGGTAGATGACATGCGCCGGCATCACTGCCGCCAGTTGCCCACTCAGGCGGGTAAACGGCACCAGGTCGGACTGGCGCAGTTGTTCCAGGCTGCGTTCATCAGTG < 2:261406/148‑1 CAACGCCGCGAGAAGCCAGCGGGCTGGTTGTCAACCTGCGGGTAGATGACATGCGCCGGCATCACTGCCGCCAGTTGCCCACTCAGGCGGGTAAACGGCACCAGGTCGGACTGGCGCAGTTGTTCCAGGCTGCGTTCATCAGTGGGGAT < 4:318962/149‑1 GCTGGGCCGAAGCCGATTCGCACGTGGCCATCCCCACTGATGAACGCAGCCTGGAACAACTGCGCCAGTCCGACCTGGTGCCGTTTACCCGCCTGAGTGGGCAACTGGCGGCAGTGATGCCGGCGCATGTCATCTACCCGCAGGTTGACAACCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2447123‑2447276‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caaccaACGCCGCGAGAAGCCAGCGGGCTGGTTGTCAACCTGCGGGTAGATGACATGCGCCGGCATCACTGCCGCCAGTTGCCCACTCAGGCGGGTAAACGGCACCAGGTCGGACTGGCGCAGTTGTTCCAGGCTGCGTTCATCAGTGGGGAT < NC_002947/2447298‑2447152 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |