| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 2497418 = | 62 (1.050) | 6 (0.110) | 6/240 | NT | 10.0% | coding (644/1125 nt) | PP_2192 | ECF family RNA polymerase sigma‑70 factor/transmembrane sensor protein |
| ? | NC_002947 | 2497457 = | 50 (0.900) | coding (683/1125 nt) | PP_2192 | ECF family RNA polymerase sigma‑70 factor/transmembrane sensor protein | |||||
GTGGCAGCATTGCCCTGCACCCGCGCACCGGCCGTTTCGACCACAAACGGACGTGAATCATCGGCGGTCTCGAACAACGCCTCACCCGCATCGAGTACCACACGCCGTTCATGCTCGCTGAACGCCACGCTCAAGGCACTGGCGCTGTTCAGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2497571‑2497418‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gttcagcgAGCATGAACGGCGTGTGGTACTCGATGCGGGTGAGGCGTTGTTCGAGACCGCCGATGATTCACGTCCGTTTGTGGTCGAAACGGCCGGTGCGCGGGTGCAGGGCAATGCTGCCACCTTCAGCGTGCAGCGCGATGGCCACGTCGT > NC_002947/2497457‑2497601 GTGGCAGCATTGCCCTGCACCCGCGCACCGGCCGTTTCGACCACAAACGGACGTGAATCATCGGCGGTCTCGAACAACGCCTCACCCGCATCGAGTACCACACGCCGTTCATGCTCGCTGAACGCCACGCTCAAGGCACTGGCGCTGT > 5:287371/1‑148 AGCATTGCCCTGCACCCGCGCACCGGCCGTTTCGACCACAAACGGACGTGAATCATCGGCGGTCTCGAACAACGCCTCACCCGCATCGAGTACCACACGCCGTTCATGCTCGCTGAGCGCCACGCTCAAGGCACTGGCGCTGTTCAGCG < 1:229224/149‑1 CGACCACAAACGGACGTGAATCATCGGCGGTCTCGAACAACGCCTCACCCGCATCGAGTACCACACGCCGTTCATGCTCGCTGAACGCCACGCTCAAGGCACTGGCGCTGTTCA > 5:103982/1‑114 CGACCACAAACGGACGTGAATCATCGGCGGTCTCGAACAACGCCTCACCCGCATCGAGTACCACACGCCGTTCATGCTCGCTGAACGCCACGCTCAAGGCACTGGCGCTGTTCA < 6:103982/114‑1 CTCGCTGAACGCCACGCTCAAGGCACTGGCGCTGTTCAGCGAGCATGAACGGCGTGTGGTACTCGATGCGGGTGAGGCGTTGTTCGAGACCGCCGATGATTCACGTCCGTTTGTGGTCGAAACGGCCGGTGCGCGGGTGCAGGGCAATG > 2:129911/1‑149 TCGCTGAACGCCACGCTCAAGGCACTGGCGCTGTTCAGCGAGCATGAACGGCGTGTGGTACTCGATGCGGGTGAGGCGTTGTTCGAGACCGCCGATGATTCACGTCCGTTTGTGGTCGAAACGGCCGGTGCGCGGGTGCAGGGCAATGC > 4:305712/1‑149 TGAACGCCACGCTCAAGGCACTGGCGCTGTTCAGCGAGCATGAACGGCGTGTGGTACTCGATGCGGGTGAGGCGTTGTTCGAGACCGCCGATGATTCACGTCCGTTTGTGGTCGAAACGGCCGGTGCGCGGGTGCA < 3:25127/136‑1 TGAACGCCACGCTCAAGGCACTGGCGCTGTTCAGCGAGCATGAACGGCGTGTGGTACTCGATGCGGGTGAGGCGTTGTTCGAGACCGCCGATGATTCACGTCCGTTTGTGGTCGAAACGGCCGGTGCGCGGGTGCA > 4:25127/1‑136 AACGCCACGCTCAAGGCACTGGCGCTGTTCAGCGAGCATGAACGGCGTGTGGTACTCGATGCGGGTGAAGCGTT > 3:301129/1‑74 AACGCCACGCTCAAGGCACTGGCGCTGTTCAGCGAGCATGAACGGCGTGTGGTACTCGATGCGGGTGAAGCGTT < 4:301129/74‑1 AGCGAGCATGAACGGCGTGTGGTACTCGATGCGGGTGAGGCGTTGTTCGAGACCGCCGATGATTCACGTCCGTTTGTGGTCGAAACGGCCGGTGCGCGGGTGCAGGGCAATGCTGCCACCTTCAGCGTGCAGCGCGATGGCCACGTCGT > 4:333486/1‑149 GTGGCAGCATTGCCCTGCACCCGCGCACCGGCCGTTTCGACCACAAACGGACGTGAATCATCGGCGGTCTCGAACAACGCCTCACCCGCATCGAGTACCACACGCCGTTCATGCTCGCTGAACGCCACGCTCAAGGCACTGGCGCTGTTCAGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2497571‑2497418‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gttcagcgAGCATGAACGGCGTGTGGTACTCGATGCGGGTGAGGCGTTGTTCGAGACCGCCGATGATTCACGTCCGTTTGTGGTCGAAACGGCCGGTGCGCGGGTGCAGGGCAATGCTGCCACCTTCAGCGTGCAGCGCGATGGCCACGTCGT > NC_002947/2497457‑2497601 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |