New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 2497418 =62 (1.050)6 (0.110) 6/240 NT 10.0% coding (644/1125 nt) PP_2192 ECF family RNA polymerase sigma‑70 factor/transmembrane sensor protein
?NC_002947 2497457 = 50 (0.900)coding (683/1125 nt) PP_2192 ECF family RNA polymerase sigma‑70 factor/transmembrane sensor protein

CTGGTCGCCGCTGTGGCGGGTTGGCAGCAAGCCCCGATACTGCTGGCCGATTACCACACCGCCGTGGGCGAGCGGCAGGTCATTACCCTGACAGATGGCACACGGGTGACGCTGAACAGCGCCAGTGCCTTGAGCGTGGCGTTCAGCGAGCATGAACGGCGTGTGGTACTCGATGCGGGTGAGGCGTTGTTCGAGACCGCCGATGATTCACGTCCGTTTGTGGTCGAAACGGCCGGTGCGCGGGTGCAGGGCAATGCTGCCACCTTCAGCGTGCAGCGCGATGGCCACGTCGTGTTG  >  NC_002947/2497309‑2497605
                                                                                                                                                    |                                                                                                                                                    
gcattgccctgcacccgcgcaccggccgtttcgaccacaaacggacgtgaatcatcggcggtctcgaacaacgcctcacccgcatcgagtaccacacgccgttcatgctCGCTGAACAGCGCCAGTGCCTTGAGCGTGGCGTTCAGCGa                                                                                                                                                      >  4:305712‑M1/110‑149 (MQ=255)
cTGGTCGCCGCTGTGGCGGGTTGGCAGCAAGCCCCGATACTGCTGGCCGATTACCACACCGCCGTGGGCGAGCGGCAGGTCATTACCCTGACAGATGGCACACGGGTGACGCTGAACAGCGCCAGTGCCTTGAGCGTGGCGTTCAGCGa                                                                                                                                                      <  6:261774/149‑1 (MQ=255)
 cattgccctgcacccgcgcaccggccgtttcgaccacaaacggacgtgaatcatcggcggtctcgaacaacgcctcacccgcatcgagtaccacacgccgttcatgctCGCTGAACAGCGCCAGTGCCTTGAGCGTGGCGTTCAGCGAg                                                                                                                                                     >  2:129911‑M1/109‑149 (MQ=255)
      gccgcTGTGGCGGGTTGGCAGCAAGCCCCGATACTGCTGGCCGATTACCACACCGCCGTGGGCGAGCGGCAGGTCATTACCCTGACAGATGGCACACGGGTGACGCTGAACAGCGCCAGTGCCTTGAGCGTGGCGTTCAGCGAGCATg                                                                                                                                                 >  5:66808/1‑148 (MQ=255)
        cgcTGTGGCGGGTTGGCAGCAAGCCCCGATACTGCTGGCCGATTACCACACCGCCGTGGGCGAGCGGCAGGTCATTACCCTGACAGATGGCACACGGGTGACGCTGAACAGCGCCAGTGCCTTGAGCGTGGCGTTCAGCGAGCATGAAc                                                                                                                                              >  1:247338/1‑149 (MQ=255)
                cGGGTTGGCAGCAAGCCCCGATACTGCTGGCCGATTACCACACCGCCGTGGGCGAGCGGCAGGTCATTACCCTGACAGATGGCACACGGGTGACGCTGAACAGCGCCAGTGCCTTGAGCGTGGCGTTCAGCGAGCATGAACGGCGtgtg                                                                                                                                      <  1:251143/149‑1 (MQ=255)
                      ggCAGCAAGCCCCGATACTGCTGGCCGATTACCACACCGCCGTGGGCGAGCGGCAGGTCATTACCCTGACAGATGGCACACGGGTGACGCTGAACAGCGCCAGTGCCTTGAGCGTGGCGTTCAGCGAGCATGAACGGCGTGTGGTACTc                                                                                                                                >  6:366688/1‑149 (MQ=255)
                      ggCAGCAAGCCCCGATACTGCTGGCCGATTACCACACCGCCGTGGGCGAGCGGCAGGTCATTACCCTGACAGATGGCACACGGGTGACGCTGAACAGCGCCAGTGCCTTGAGCGTGGCGTTCAGCGAGCATGAACGGCGCGTGGTACt                                                                                                                                 <  3:248058/148‑1 (MQ=255)
                        cagcaAGCCCCGATACTGCTGGCCGATTACCACACCGCCGTGGGCGAGCGGCAGGTCATTACCCTGACAGATGGCACACGGGTGACGCTGAACAGCGCCAGTGCCTTGAGCGTGGCGTTCAGCGAGCATGAACGGCGTGTGGTACTCGa                                                                                                                              >  2:83158/1‑149 (MQ=255)
                           caAGCCCCGATACTGCTGGCCGATTACCACACCGCCGTGGGCGAGCGGCAGGTCATTACCCTGACAGATGGCACACGGGTGACGCTGAACAGCGCCAGTGCCTTGAGCGTGGCGTTCAGCGAGCATGAACGCCGTGTGGTACTCGATGc                                                                                                                           <  6:66808/149‑1 (MQ=255)
                             aGCCCCGATACTGCTGGCCGATTACCACCCCGCCGTGGGCGAGCGGCCGGTCATTACCCTGACAGATGGCACACGGGTGACGCTGAACAGCGCCAGTGCCTTGAGCGTGGCGTTCAGCGAGCATGAACGGCGTGTGGTACTCGATGCgg                                                                                                                         <  3:289986/149‑1 (MQ=255)
                              gCCCCGATACTGCTGGCCGATTACCACACCGCCGTGGGCGAGCGGCAGGTCATTACCCTGACAGATGGCACACGGGTGACGCTGAACAGCGCCAGTGCCTTGAGCGTGGCGTTCAGCGAGCATGAACGGCGTGTGGTACTCGATGCggg                                                                                                                        >  1:205525/1‑149 (MQ=255)
                                  cGATACTGCTGGCCGATTACCACACCGCCGTGGGCGAGCGGCAGGTCATTACCCTGACAGATGGCACACGGGTGACGCTGAACAGCGCCAGTGCCTTGAGCGTGGCGTTCAGCGAGCATGAACGGCGTGTGGTACTCGATGCGGGTGAg                                                                                                                    >  2:25098/1‑149 (MQ=255)
                                   gATACTGCTGGCCGATTACCACACCGCCGTGGGCGAGCGGCAGGTCATTACCCTGACAGATGGCACACGGGTGACGCTGAACAGCGCCAGTGCCTTGAGCGTGGCGTTCAGCGAGCATGAACGGCGTGTGGTACTCGATGCGGGTGAgg                                                                                                                   >  4:116491/1‑149 (MQ=255)
                                        tgctgGCCGATTACCACACCGCCGTGGGCGAGCGGCAGGTCATTACCCTGACAGATGGCACACGGGTGACGCTGAACAGCGCCAGTGCCTTGAGCGTGGCGTTCAGCGAGCATGAACGGCGTGTGGTACTCGATGCGGGTGAGGCgttg                                                                                                              >  1:28030/1‑149 (MQ=255)
                                          ctgGCCGATTACCACACCGCCGTGGGCGAGCGGCAGGTCATTACCCTGACAGATGGCACACGGGTGACGCTGAACAGCGCCAGTGCCTTGAGCGTGGCGTTCAGCGAGCATGAACGGCGTGTGGTACTCGATGCGGGTGAGGCgttgtt                                                                                                            <  4:88086/149‑1 (MQ=255)
                                          ctgGCCGATTACCACACCGCCGTGGGCGAGCGGCAGGTCATTACCCTGACAGATGGCACACGGGTGACGCTGAACAGCGCCAGTGCCTTGAGCGTGGCGTTCAGCGAGCATGAACGGCGTGTGGTACTCGATGCGGGTGAGGCgttgt                                                                                                             <  2:28030/148‑1 (MQ=255)
                                            ggCCGATTACCACACCGCCGTGGGCGAGCGGCAGGTCATTACCCTGACAGATGGCACACGGGTGACGCTGAACAGCGCCAGTGCCTTGAGCGTGGCGTTCAGCGAGCATGAACGGCGTGTGGTACTCGATGCgg                                                                                                                         <  4:367954/134‑1 (MQ=255)
                                            ggCCGATTACCACACCGCCGTGGGCGAGCGGCAGGTCATTACCCTGACAGATGGCACACGGGTGACGCTGAACAGCGCCAGTGCCTTGAGCGTGGCGTTCAGCGAGCATGAACGGCGTGTGGTACTCGATGCgg                                                                                                                         >  3:367954/1‑134 (MQ=255)
                                               cGATTACCACACCGCCGTGGGCGAGCGGCAGGTCATTACCCTGACAGATGGCACACGGGTGACGCTGAACAGCGCCAGTGCCTTGAGCGTGGCGTTCAGCGAGCATGAACGGCGTGTGGTACTCGATGCGGGTGAGGCGTTGTTCgaga                                                                                                       >  3:331673/1‑149 (MQ=255)
                                                 aTTACCACACCGCCGTGGGCGAGCGGCAGGTCATTACCCTGACAGATGGCACACGGGTGACGCTGAACAGCGCCAGTGCCTTGAGCGTGGCGTTCAGCGAGCATGAACGGCGTGTGGTACTCGATGCGGGTGAGGCGTTGTTCGAGAcc                                                                                                     <  5:366688/149‑1 (MQ=255)
                                                  ttACCACACCGCCGTGGGCGAGCGGCAGGTCATTACCCTGACAGATGGCACACGGGTGACGCTGAACAGCGCCAGTGCCTTGAGCGTGGCGTTCAGCGAGCATGAACGGCGTGTGGTACTCGATGCGGGTGAGGCGTTGTTCGAGAccg                                                                                                    >  7:321737/1‑149 (MQ=255)
                                                      cacaCCGCCGTGGGCGAGCGGCAGGTCATTACCCTGACAGATGGCACACGGGTGACGCTGAACAGCGCCAGTGCCTTGAGCGTGGCGTTCAGCGAGc                                                                                                                                                    <  2:22538/97‑1 (MQ=255)
                                                      cacaCCGCCGTGGGCGAGCGGCAGGTCATTACCCTGACAGATGGCACACGGGTGACGCTGAACAGCGCCAGTGCCTTGAGCGTGGCGTTCAGCGAGc                                                                                                                                                    >  1:22538/1‑97 (MQ=255)
                                                      cacaCCGCCGTGGGCGAGCGGCAGGTCATTACCCTGACAGATGGCACACGGGTGACGCTGAACAGCGCCAGTGCCTTGAGCGTGGCGTTCAGCGAGCATGAACGGCGTGTGGTACTCGATGCGGGTGAGGCGTTGTTCg                                                                                                          <  4:271479/139‑1 (MQ=255)
                                                      cacaCCGCCGTGGGCGAGCGGCAGGTCATTACCCTGACAGATGGCACACGGGTGACGCTGAACAGCGCCAGTGCCTTGAGCGTGGCGTTCAGCGAGCATGAACGGCGTGTGGTACTCGATGCGGGTGAGGCGTTGTTCg                                                                                                          >  3:271479/1‑139 (MQ=255)
                                                      cacaCCGCCGTGGGCGAGCGGCAGGTCATTACCCTGACAGATGGCACACGGGTGACGCTGAACAGCGCCAGTGCCTTGAGCGTGGCGTTCAGCGAGCATGAACGGCGTGTGGTACTCGATGCGGGTGAGGCGTTGTTCGAGACCGCCga                                                                                                <  1:25098/149‑1 (MQ=255)
                                                        cacCGCCGTGGGCGAGCGGCAGGTCATTACCCTGACAGATGGCACACGGGTGACGCTGAACAGCGCCAGTGCCTTGAGCGTGGCGTTAAGCGAGCATGAACGGCGTGTGGTACTCGATGCGGGTGAGGCGTTGTTCGAGACCGCCgat                                                                                               >  6:77098/1‑148 (MQ=255)
                                                         acCGCCGTGGGCGAGCGGCAGGTCATTACCCTGACAGATGGCACACGGGTGACGCTGAACAGCGCCAGTGCCTTGAGCGTGGCGTTCAGCGAGCATGAACGGCGTGTGGTACTCGATGCGGGTGAGGCGTTGTTCGAGACCGCCgatga                                                                                             <  8:130532/149‑1 (MQ=255)
                                                            gccgTGGGCGAGCGGCAGGTCATTACCCTGACAGATGGCACACGGGTGACGCTGAACAGCGCCAGTGCCTTGAGCGTGGCGTTCAGCGAGCATGAACGGCGTGTGGTACTCGATGCGGGTGAGGCGTTGTTCGAGACCGCCGATGATTc                                                                                          <  1:83158/149‑1 (MQ=255)
                                                            gccgTGGGCGAGCGGCAGGTCATTACCCTGACAGATGGCACACGGGTGACGCTGAACAGCGCCAGTGCCTTGAGCGTGGCGTTCAGCGAGCATGAACGGCGTGTGGTACTCGATGCGGGTGAGGCGTTGTTCGAGACCGCCGATGATTc                                                                                          <  7:358479/149‑1 (MQ=255)
                                                                tGGGCGAGCGGCAGGTCATTACCCTGACAGATGGCACACGGGTGACGCTGAACAGCGCCAGTGCCTTGAGCGTGGCGTTCAGCGAGCATGAACGGCGTGTGGTACTCGATGCGGGTGAGGCGTTGTTCGAGACCGCCGATGATTCACGt                                                                                      <  3:116491/149‑1 (MQ=255)
                                                                  ggCGAGCGGCAGGTCATTACCCTGACAGATGGCACACGGGTGACGCTGAACAGCGCCAGTGCCTTGAGCGTGGCGTTCAGCGAGCATGAACGGCGTGTGGTACTCGATGCGGGTGAGGCGTTGTTCGAGACCGCCGATGATTCACGTcc                                                                                    <  1:362671/149‑1 (MQ=255)
                                                                            aGGTCATTACCCTGACAGATGGCACACGGGTGACGCTGAACAGCGCCAGTGCCTTGAGCGTGGCGTTCAGCGAGCATGAACGGCGTGTGGTACTCGATGCGGGTGAGGCGTTGTTCGAGACCGCCGATGATTCACGTCCGTTTGTGGTc                                                                          <  2:247338/149‑1 (MQ=255)
                                                                              gTCATTACCCTGACAGATGGCACACGGGTGACGCTGAACAGCGCCAGTGCCTTGAGCGTGGCGTTCAGCGAGCATGAACGGCGTGTGGTACTCGATGCGGGTGAGGCGTTGTTCGAGACCGCCGATGATTCACGTCCGTTTGTGGTCg                                                                         >  2:44220/1‑148 (MQ=255)
                                                                                 aTTACCCTGACAGATGGCACACGGGTGACGCTGAACAGCGCCAGTGCCTTGAGCGTGGCGTTCAGCGAGCATGAACGGCGTGTGGTACTCGATGCGGGTGAGGCGTTGTTCGAGACCGCCGATGATTCACGTCCGTTTGTGGTCGAAAc                                                                     >  7:91233/1‑149 (MQ=255)
                                                                                  ttACCCTGACAGATGGCACACGGGTGACGCTGAACAGCGCCAGTGCCTTGAGCGTGGCGTTCAGCGAGCATGAACGGCGTGTGGTACTCGATGCGGGTGAGGCGTTGTTCGAGACCGCCGATGATTCACGTCCGTTTGTGGTCGAAACg                                                                    >  1:115024/1‑149 (MQ=255)
                                                                                        tGACAGATGGCACACGGGTGACGCTGAACAGCGCCAGTGCCTTGAGCGTGGCGTTCAGCGAGCATGAACGGCGTGTGGTACTc                                                                                                                                <  5:95822/83‑1 (MQ=255)
                                                                                        tGACAGATGGCACACGGGTGACGCTGAACAGCGCCAGTGCCTTGAGCGTGGCGTTCAGCGAGCATGAACGGCGTGTGGTACTc                                                                                                                                >  6:95822/1‑83 (MQ=255)
                                                                                          aCAGATGGCACACGGGTGACGCTGAACAGCGCCAGTGCCTTGAGCGTGGCGTTCAGCGAGCATGAACGGCGTGTGGTACTCGATGCGGGTGAGGCGTTGTTCGAGACCGCCGATGATTCACGTCCGTTTGTGGTCGAAACGGCCGGt                                                              <  8:256463/147‑1 (MQ=255)
                                                                                          aCAGATGGCACACGGGTGACGCTGAACAGCGCCAGTGCCTTGAGCGTGGCGTTCAGCGAGCATGAACGGCGTGTGGTACTCGATGCGGGTGAGGCGTTGTTCGAGACCGCCGATGATTCACGTCCGTTTGTGGTCGAAACGGCCGGt                                                              <  7:187438/147‑1 (MQ=255)
                                                                                                ggCACACGGGTGACGCTGAACAGCGCCAGTGCCTTGAGCGTGGCGTTCAGCGAGCATGAACGGCGTGTGGTACTCGATGCGGGTGAGGCGTTGTTCGAGACCGCCGATGATTCACGTCCGTTTGTGGTCGAAACGGCCGGTGCGCGGGt                                                      >  4:324124/1‑149 (MQ=255)
                                                                                                 gCACACGGGTGACGCTGAACAGCGCCAGTGCCTTGAGCGTGGCGTTCAGCGAGCATGAACGGCGTGTGGTACTCGATGCGGGTGAGGCGTTGTTCGAGACCGCCGATGATTCACGTCCGTTTGTGGTCGAAACGGCCGGTGCGCGGGt                                                      <  3:324124/148‑1 (MQ=255)
                                                                                                   acacGGGTGACGCTGAACAGCGCCAGTGCCTTGAGCGTGGCGTTCAGCGAGCATGAACGGCGTGTGGTACTCGATGCGGGTGAGGCGTTGTTCGAGACCGCCGATGATTCACGTCCGTTTGTGGTCGAAACGGCCGGTGCGCGGGTg                                                     >  6:42933/1‑147 (MQ=255)
                                                                                                   acacGGGTGACGCTGAACAGCGCCAGTGCCTTGAGCGTGGCGTTCAGCGAGCATGAACGGCGTGTGGTACTCGATGCGGGTGAGGCGTTGTTCGAGACCGCCGATGATTCACGTCCGTTTGTGGTCGAAACGGCCGGTGCGCGGGTg                                                     >  6:287371/1‑147 (MQ=255)
                                                                                                    cacGGGTGACGCTGAACAGCGCCAGTGCCTTGAGCGTGGCGTTCAGCGAGCATGAACGGCGTGTGGTACTCGATGCGGGTGAGGCGTTGTTCGAGACCGCCGATGATTCACGTCCGTTTGTGGTCGAAACGGCCGGTGCGCGGGTGCAg                                                  >  2:58781/1‑149 (MQ=255)
                                                                                                     acGGGTGACGCTGAACAGCGCCAGTGCCTTGAGCGTGGCGTTCAGCGAGCATGAACGGCGTGTGGTACTCGATGCGGGTGAGGCGTTGTTCGAGACCGCCGATGATTCACGTCCGTTTGTGGTCGAAACGGCCGGTGCGCGGGTGCAgg                                                 <  8:321737/149‑1 (MQ=255)
                                                                                                      cGGGTGACGCTGAACAGCGCCAGTGCCTTGAGCGTGGCGTTCAGCGAGCATGAACGGCGTGTGGTACTCGATGCGGGTGAGGCGTTGTTCGAGACCGCCGATGATTCACGTCCGTTTGTGGTCGAAACGGCCGGTGCGCGGGTGCAggg                                                <  5:42933/149‑1 (MQ=255)
                                                                                                         gTGACGCTGAACAGCGCCAGTGCCTTGAGCGTGGCGTTCAGCGAGCATGAACGGCGTGTGGTACTCGATGCGGGTGAGGCGTTGTTCGAGACCGCCgat                                                                                               >  7:290924/1‑99 (MQ=255)
                                                                                                         gTGACGCTGAACAGCGCCAGTGCCTTGAGCGTGGCGTTCAGCGAGCATGAACGGCGTGTGGTACTCGATGCGGGTGAGGCGTTGTTCGAGACCGCCgat                                                                                               <  8:290924/99‑1 (MQ=255)
                                                                                                           ctcgctgaacgccacgctcaaggcactggcgctgttcagcgAGCATGAACGGCGTGTGGTACTCGATGCGGGTGAGGCGTTGTTCGAGACCGCCGATGATTCACGTCCGTTTGTGGTCGAAACGGCCGGTGCGCGGGTGCAGGGCAAtg                                           >  2:129911‑M2/42‑149 (MQ=255)
                                                                                                            tcgctgaacgccacgctcaaggcactggcgctgttcagcgAGCATGAACGGCGTGTGGTACTCGATGCGGGTGAGGCGTTGTTCGAGACCGCCGATGATTCACGTCCGTTTGTGGTCGAAACGGCCGGTGCGCGGGTGCAGGGCAAtgc                                          >  4:305712‑M2/41‑149 (MQ=255)
                                                                                                            aCGCTGAACAGCGCCAGTGCCTTGAGCGTGGCGTTCAGCGAGCATGAACGGCGTGTGGTACTCGATGCGGGTGAGGCGTTGTTCGAGACCGCCGATGATTCACGTCCGTTTGTGGTCGAAACGGCCGGTGCGCGGGTGCAGGGCAAtg                                           <  1:44220/148‑1 (MQ=255)
                                                                                                             CGCTGAACAGCGCCAGTGCCTTGAGCGTGGCGCTCAGCGAGCATGAACGGCGTGTGGTACTCGATGCGGGTGAGGCGTTGTTCGAGACCGCCGATGATTCACGTCCGTTTGTGGTCGAAACGGCCGGTGCGCGGGTGCAGGGCAAtgct                                         <  1:229224‑M1/149‑1 (MQ=255)
                                                                                                                tgaacgccacgctcaaggcactggcgctgttcagcgAGCATGAACGGCGTGTGGTACTCGATGCGGGTGAGGCGTTGTTCGAGACCGCCGATGATTCACGTCCGTTTGTGGTCGAAACGGCCGGTGCGCGGGTGCa                                                   >  4:25127‑M2/37‑136 (MQ=255)
                                                                                                                tgaacgccacgctcaaggcactggcgctgttcagcgAGCATGAACGGCGTGTGGTACTCGATGCGGGTGAGGCGTTGTTCGAGACCGCCGATGATTCACGTCCGTTTGTGGTCGAAACGGCCGGTGCGCGGGTGCa                                                   <  3:25127‑M2/100‑1 (MQ=255)
                                                                                                                TGAACAGCGCCAGTGCCTTGAGCGTGGCGTTCAGCGAGCATGAACGGCGTGTGGTACTCGATGCGGGTGAGGCGTTGTTCGAGACCGCCGATGATTCACGTCCGTTTGTGGTCg                                                                         <  6:103982‑M1/114‑1 (MQ=255)
                                                                                                                TGAACAGCGCCAGTGCCTTGAGCGTGGCGTTCAGCGAGCATGAACGGCGTGTGGTACTCGATGCGGGTGAGGCGTTGTTCGAGACCGCCGATGATTCACGTCCGTTTGTGGTCg                                                                         >  5:103982‑M1/1‑114 (MQ=255)
                                                                                                                  aacgccacgctcaaggcactggcgctgttcagcgAGCATGAACGGCGTGTGGTACTCGATGCGGGTGAAGCgtt                                                                                                               <  4:301129‑M2/40‑1 (MQ=255)
                                                                                                                  aacgccacgctcaaggcactggcgctgttcagcgAGCATGAACGGCGTGTGGTACTCGATGCGGGTGAAGCgtt                                                                                                               >  3:301129‑M2/35‑74 (MQ=255)
                                                                                                                   ACAGCGCCAGTGCCTTGAGCGTGGCGTTCAGCGAGCATGAACGGCGTGTGGTACTCGATGCGGGTGAGGCGTTGTTCGAGACCGCCGATGATTCACGTCCGTTTGTGGTCGAAACGGCCGGTGCGCGGGTGCAGGGCAATGCTGCCAc                                    >  5:287371‑M1/1‑148 (MQ=255)
                                                                                                                     aGCGCCAGTGCCTTGAGCGTGGCGTTCAGCGAGCATGAACGGCGTGTGGTACTCGATGCGGGTGAGGCGTTGTTCGAGACCGCCGATGATTCACGTCCGTTTGTGGTCGAAACGGCCGGTGCGCGGGTGCAGGGCAATGCTGCCACCtt                                 >  6:23033/1‑149 (MQ=255)
                                                                                                                      gcgcCAGTGCCTTGAGCGTGGCGTTCAGCGAGCATGAACGGCGTGTGGTACTCGATGCGGGTGAGGCGTTGTTCGAGACCGCCGATGATTCACGTCCGTTTGTGGTCGAAACGGCCGGTGCGCGGGTGCAGGGCAATGCTGCCACCtt                                 >  5:295332/1‑148 (MQ=255)
                                                                                                                             tGCCTTGAGCGTGGCGTTCAGCGAGCATGAACGGCGTGTGGTACTCGATGCGGGTGAGGCGTTGTTCGAGACCGCCGATGATTCACGTCCGTTTGTGGTCGAAACGGCCGGTGCGCGGGTGCAGGGCAAtg                                           >  1:376485/1‑131 (MQ=255)
                                                                                                                             tGCCTTGAGCGTGGCGTTCAGCGAGCATGAACGGCGTGTGGTACTCGATGCGGGTGAGGCGTTGTTCGAGACCGCCGATGATTCACGTCCGTTTGTGGTCGAAACGGCCGGTGCGCGGGTGCAGGGCAAtg                                           <  2:376485/131‑1 (MQ=255)
                                                                                                                                                agcgAGCATGAACGGCGTGTGGTACTCGATGCGGGTGAGGCGTTGTTCGAGACCGCCGATGATTCACGTCCGTTTGTGGTCGAAACGGCCGGTGCGCGGGTGCAGGGCAATGCTGCCACCTTCAGCGTGCAGCGCGATGGCCAcgtcgt      >  4:333486‑M2/5‑149 (MQ=255)
                                                                                                                                                    aGCATGAACGGCGTGTGGTACTCGATGCGGGTGAGGCGTTGTTCGAGACCGCCGATGATTCACGTCCGTTTGTGGTCGAAACGGCCGGTGCGCGGGTGCAGGGCAATGCTGCCACCTTCAGCGTGCAGCGCGATGGCCACGTCGTGTTg  <  5:77098/149‑1 (MQ=255)
                                                                                                                                                    |                                                                                                                                                    
CTGGTCGCCGCTGTGGCGGGTTGGCAGCAAGCCCCGATACTGCTGGCCGATTACCACACCGCCGTGGGCGAGCGGCAGGTCATTACCCTGACAGATGGCACACGGGTGACGCTGAACAGCGCCAGTGCCTTGAGCGTGGCGTTCAGCGAGCATGAACGGCGTGTGGTACTCGATGCGGGTGAGGCGTTGTTCGAGACCGCCGATGATTCACGTCCGTTTGTGGTCGAAACGGCCGGTGCGCGGGTGCAGGGCAATGCTGCCACCTTCAGCGTGCAGCGCGATGGCCACGTCGTGTTG  >  NC_002947/2497309‑2497605

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.