New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 2700177 = | 44 (0.740) | 3 (0.050) | 3/248 | NT | 6.6% | coding (334/1263 nt) | fsr‑II | fosmidomycin efflux system |
? | NC_002947 | 2700210 = | 42 (0.730) | coding (301/1263 nt) | fsr‑II | fosmidomycin efflux system |
CGATTTCGCGCTGAGCTTCGCCCAGATCGGCTGGATCGCCTTGGTGTATCAGGTGACCGCTTCCCTGCTGCAACCTTGGGTCGGCATGTTCACCGACAAGCACCCACAACCCTACCTGTTACCTGCCGGCATGCTGGTGACGCTGGTGGGTA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2700328‑2700177 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggtaACAGGTAGGGTTGTGGGTGCTTGTCGGTGAACATGCCGACCCAAGGTTGCAGCAGGGAAGCGGTCACCTGATACACCAAGGCGATCCAGCCGATCTGGGCGAAGCTCAGCGCGAAATCGCTTTTCAGCATGGGGTAGATCGACGGCA > NC_002947/2700210‑2700356 CGATTTCGCGCTGAGCTTCGCCCAGATCGGCTGGATCGCCTTGGTGTATCAGGTGACCGCTTCCCTGCTGCAACCTTGGGTCGGCATGTTCACCGACAAGCACCCACAACCCTACCTGTTACCTGCCGGCATGCTGGTGACGCTGGTGG < 8:134586/149‑1 TTTCGCGCTGAGCTTCGCCCAGATCGGCTGGATCGCCTTGGTGTATCAGGTGACCGCTTCCCTGCTGCAACCTTGGGTCGGCATGTTCACCGACAAGCACCCACAACCCTACCTGTTACCTGCCGGCATGCTGGTGACGCTGGTGGGTA < 6:118989/149‑1 TGTTACCTGCCGGCATGCTGGTGACGCTGGTGGGTAACAGGTAGGGTTGTGGGTGCTTGTCGGTGAACATGCCGACCCAAGGTTGCAGCAGGGAAGCGGTCACCTGATACACCAAGGCGATCCAGCCGATCTGGGCGAAGCTCAGCGC > 5:173478/1‑148 CCTGCCGGCATGCTGGTGACGCTGGTGGGTAACAGGTAGGGTTGTGGGTGCTTGTCGGTGAACATGCCGACCCAAGGTTGCAGCAGGGAAGCGGTCACCTGATACACCAAGGCGATCC < 3:238450/118‑1 CCTGCCGGCATGCTGGTGACGCTGGTGGGTAACAGCTAGGGTTGTGGGTGCTTGTCGGTGAACATGCCGACACAAGGAAGCAGCAGGGAAGCGGTCACCTGATACACCAAGGCGATCa > 4:238450/1‑117 TAACAGGTAGGGTTGTGGGTGCTTGTCGGTGAACATGCCGACCCAAGGTTGCAGCAGGGAAGCGGTCACCTGATACACCAAGGCGATCCAGCCGATCTGGGCGAAGCTCAGCGCGAAATCGCTTTTCAGCATGGGGTAGATCGACGGCA < 3:218122/149‑1 CGATTTCGCGCTGAGCTTCGCCCAGATCGGCTGGATCGCCTTGGTGTATCAGGTGACCGCTTCCCTGCTGCAACCTTGGGTCGGCATGTTCACCGACAAGCACCCACAACCCTACCTGTTACCTGCCGGCATGCTGGTGACGCTGGTGGGTA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2700328‑2700177 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggtaACAGGTAGGGTTGTGGGTGCTTGTCGGTGAACATGCCGACCCAAGGTTGCAGCAGGGAAGCGGTCACCTGATACACCAAGGCGATCCAGCCGATCTGGGCGAAGCTCAGCGCGAAATCGCTTTTCAGCATGGGGTAGATCGACGGCA > NC_002947/2700210‑2700356 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |