| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 3140748 = | 51 (0.860) | 3 (0.050) | 3/246 | NT | 6.6% | coding (48/387 nt) | PP_2756 | hypothetical protein |
| ? | NC_002947 | 3140802 = | 36 (0.630) | coding (102/387 nt) | PP_2756 | hypothetical protein | |||||
GAGGCGTCGGCGCGTGCCAGCAACGCGTCGGCGGCGTCGATACGGATGCGCAACTCGCCGACTGCAGCGATGACCAGCGCTTCATGGCGAGCACTCTGCCCGCGCAGGTAGTCAAGCAGAGCTGCCTCGACATGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3140882‑3140748‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑catgaAGCGCTGGTCATCGCTGCAGTCGGCGAGTTGCGCATCCGTATCGACGCCGCCGACGCGTTGCTGGCACGCGCCGACGCCTCGCAGTCGGCCGCCA > NC_002947/3140802‑3140896 GAGGCGTCGGCGCGTGCCAGCAACGCGTCGGCGGCGTCGATACGGATGCGCAACTCGCCGACTGCAGCGATGACCAGCGCTTCATGGCGAGCACTCTGCCCGCGCAGGTAGTCAAGCAGAGCTGCCTCGACATGA < 3:67133/135‑1GAGGCGTCGGCGCGTGCCAGCAACGCGTCGGCGGCGTCGATACGGATGCGCAACTCGCCGACTGCAGCGATGACCAGCGCTTCATGGCGAGCACTCTGCCCGCGCAGGTAGTCAAGCAGAGCTGCCTCGACATGA > 4:67133/1‑135 TTCATGGCGAGCACTCTGCCCGCGCAGGTAGTCAAGCAGAGCTGCCTCGACATGAAGCGCTGGTCATCGCTGCAGTCGGCGAGTTGCGCATCCGTATCGACGCCGCCGACGCGTTGCTGGCACGCGCCGACGCCTCGCAGTC > 7:310069/1‑142 TTCATGGCGAGCACTCTGCCCGCGCAGGTAGTCAAGCAGAGCTGCCTCGACATGAAGCGCTGGTCATCGCTGCAGTCGGCGAGTTGCGCATCCGTATCGACGCCGCCGACGCGTTGCTGGCACGCGCCGACGCCTCGCAGTC < 8:310069/142‑1 TCATGGCGAGCACTCTGCCCGCGCAGGTAGTCAAGCAGAGCTGCCTCGACATGAAGCGCTGGTCATCGCTGCAGTCGGCGAGTTGCGCATCCGTATCGACGCCGCCGACGCGTTGCTGGCACGCGCCGACGCCTCGCAGTCGGCCGCCA > 1:53055/1‑149 GAGGCGTCGGCGCGTGCCAGCAACGCGTCGGCGGCGTCGATACGGATGCGCAACTCGCCGACTGCAGCGATGACCAGCGCTTCATGGCGAGCACTCTGCCCGCGCAGGTAGTCAAGCAGAGCTGCCTCGACATGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3140882‑3140748‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑catgaAGCGCTGGTCATCGCTGCAGTCGGCGAGTTGCGCATCCGTATCGACGCCGCCGACGCGTTGCTGGCACGCGCCGACGCCTCGCAGTCGGCCGCCA > NC_002947/3140802‑3140896 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |