| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 3160647 | 41 (0.690) | 4 (0.070) | 4/246 | NT | 7.7% | coding (561/1047 nt) | PP_2775 | glycine betaine/L‑proline ABC transporter substrate‑binding protein |
| ? | NC_002947 | = 3160695 | 57 (1.000) | coding (609/1047 nt) | PP_2775 | glycine betaine/L‑proline ABC transporter substrate‑binding protein | |||||
AAAAAGCCAGAGGTCGCCAAGTTGTTTGCTCCGCTGGGCGGCGGCAAGTCGCAGTTGTTGGTCGGGCCGGCAGGTTGGGAGTCGACGTATATCGGCCAGATAAAAGCCAAGGATTTCGGTTTTGATGGCAACTTCGAGTCGGTCTCCACG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3160498‑3160647‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccacgCTCGGCCTTGTAGGCAGCATCCAGCTTCGCGTAAGTCACCGAGGCCTCCGTGGAGACCGACTCGAAGTTGCCATCAAAACCGAAATCCTTGGCTTTTATCTGGCCGATATACGTCGACTCCCAACCTGCCGGCCCGAC < NC_002947/3160695‑3160558 AAAAAGCCAGAGGTCGCCAAGTTGTTTGCTCCGCTGGGCGGCGGCAAGTCGCAGTTGTTGGTCGGGCCGGCAGGTTGGGAGTCGACGTATATCGGCCAGATAAAAGCCAAGGATTTCGGTTTTGATGGCAACTTCGAGTCGGTCTCCAC > 7:4722/1‑149 TTGCTCCGCTGGGCGGCGGCAAGTCGCAGTTGTTGGTCGGGCCGGCAGGTTGGGAGTCGACGTATATCGGCCAGATAAAAGCCAAGGATTTCGGTTTTGATGGCAACTTCGAGTCGGTCTCCACGCTCGGCCTTGTAGGCAGCATCCAG > 3:119963/1‑149 TTGGTCGGGCCGGCAGGTTGGGAGTCGACGTATATCGGCCAGATAAAAGCCAAGGATTTCGGTTTTGATGGCAACTTCGAGTCGGTCTCCACGCTCGGCCTTGTAGGCAGCATCCAGCTTCGCGTAAGTCACCGAGGCCTCCGTGGAGA < 4:119963/149‑1 ATATCGGCCAGATAAAAGCCAAGGATTTCGGTTTTGATGGCAACTTCGAGTCGGTCTCCACGCTCGGCCTTGTAGGCAGCATCCAGCTTCGCGTAAGTCACCGAGGCCTCCGTGGAGAC < 5:305214/119‑1 ATATCGGCCAGATAAAAGCCAAGGATTTCGGTTTTGATGGCAACTTCGAGTCGGTCTCCACGCTCGGCCTTGTAGGCAGCATCCAGCTTCGCGTAAGTCACCGAGGCCTCCGTGGAGAC > 6:305214/1‑119 CACGCTCGGCCTTGTAGGCAGCATCCAGCTTCGCGTAAGTCACCGAGGCCTCCGCGGAGACCGACTCGAAGTTGCCATCAAAACCGAAATCCTTGGCTTTTATCTGGCCGATATACGTCGACTCCCAACCTGCCGGCCCGAC > 3:113114/1‑142 AAAAAGCCAGAGGTCGCCAAGTTGTTTGCTCCGCTGGGCGGCGGCAAGTCGCAGTTGTTGGTCGGGCCGGCAGGTTGGGAGTCGACGTATATCGGCCAGATAAAAGCCAAGGATTTCGGTTTTGATGGCAACTTCGAGTCGGTCTCCACG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3160498‑3160647‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccacgCTCGGCCTTGTAGGCAGCATCCAGCTTCGCGTAAGTCACCGAGGCCTCCGTGGAGACCGACTCGAAGTTGCCATCAAAACCGAAATCCTTGGCTTTTATCTGGCCGATATACGTCGACTCCCAACCTGCCGGCCCGAC < NC_002947/3160695‑3160558 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |