New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 3186577	45 (0.760)	4 (0.070)	4/244	NT	8.0%	coding (193/1659 nt)	actP‑II	acetate permease
	?	NC_002947	= 3186643	49 (0.870)					coding (259/1659 nt)	actP‑II	acetate permease

CCTGCTGCTGGCTTCGCCTTCGCTCGACGCTGGTCAGCGTCAGCCGCTCAACCTGCATGCCATCGGCATGTTCATGGTGTTCGTGCTGTTCACCTTGTGCATCACCTGGTGGGCGGCGCGTCGCACACGCTCGACGACAGACTTCTACAGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/3186426‑3186577 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acagcgTCGAGGCGGACATGTAGTCCCCGGCCAGCGCCAGGCCGTTCTGCCAGCCCTGGATGCCGCCACCGGCGCTGTAGAAGTCTGTCGTCGAGCGTGTGCGACGCGCCGCCCACCAGGTGATGCACAAGGTGAACAGCACGAACACCATG  <  NC_002947/3186643‑3186498                                                                                                                                                                                                                                                                                                            CCTGCTGCTGGCTTCGCCTTCGCTCGACGCTGGTCAGCGTCAGCCGCTCAACCTGCATGCCATCGGCATGTTCATGGTGTTCGTGCTGTTCACCTTGTGCATCACCTGGTGGGCGGCGCGTCGCACACGCTCGACGACAGACTTCTA                                                                                                                                                         >  7:77419/1‑147     CTGCTGGCTTCGCCTTCGCTCGACGCTGGTCAGCGTCAGCCGCTCAACCTGCATGCCATCGGCATGTTCATGGTGTTCGTGCTGTTCACCTTGTGCATCACCTGGTGGGCGGCGCGTCGCACACGCTCGACGACAGACTTCTA                                                                                                                                                         <  3:342535/143‑1     CTGCTGGCTTCGCCTTCGCTCGACGCTGGTCAGCGTCAGCCGCTCAACCTGCATGCCATCGGCATGTTCATGGTGTTCGTGCTGTTCACCTTGTGCATCACCTGGTGGGCGGCGCGTCGCACACGCTCGACGACAGACTTCTA                                                                                                                                                         >  4:342535/1‑143                             GCTGGTCAGCGTCAGCCGCTCAACCTGCATGCCATCGGCATGTTCATGGTGTTCGTGCTGTTCACCTTGTGCATCACCTGGTGGGCGGCGCGTCGCACACGCTCGACGACAGACTTCTACAGCGTCGAGGCGGACATGTAGTCCCCGGC                                                                                                                           >  2:124501/1‑149                                                                           TGGTGTTCGTGCTGTTCACCTTGTGCATCACCTGGTGGGCGGCGCGTCGCACACGCTCGACGACAGACTTCTACAGCGTCGAGGCGGACATGTAGTCCCCGGCCAGCGCCAGGCCGTTCTGCCAGCCCTGGATGCCGCCACCGGCGCTG                                                                             <  4:294816/149‑1                                                                             GTGTTCGTGCTCTTCACCTTGTGCATCACCTGGTGGGCGGCGCGTCGCACACGCTCGACGACAGACTTCTACAGCGTCGAGGCGGACATGTAGTCCCCGGCCAGCGCCAGGCCGTTCTGCCAGCCCTGGATGCCGCCACCGGCGCTGT                                                                            <  6:310351/148‑1                                                                              TGTTCGTGCTGTTCACCTTGTGCATCACCTGGTGGGCGGCGCGTCGCACACGCTCGACGACAGACTTCTACAGCGTCGAGGCGGACATGTAGTCCCCGGCCAGCGCCAGGCCGTTCTGCCAGCCCTGGATGCCGCCACCGGCGCTGTAG                                                                          <  1:124501/149‑1                                                                                                                                                    CAGCGTCGAGGCGGACATGTAGTCCCCGGCCAGCGCCAGGCCGTTCTGCCAGCCCTGGATGCCGCCACCGGCGCTGTAGAAGTCTGTCGTCGAGCGTGTGCGACGCGCCGCCCACCAGGTGATGCACAAGGTGAACAGCACGAACACCA    <  5:291558/149‑1                                                                                                                                                     AGCGTCGAGGCGGACATGTAGTCCCCGGCCAGCGCCAGGCCGTTCTGCCAGCCCTGGATGCCGCCACCGGCGCTGTAGAAGTCTGTCGTCGAGCGTGTGCGACGCGCCGCCCACCAGGTGATGCACAAGGTGAACAGCACGAACACCAT   >  6:185341/1‑149                                                                                                                                                      GCGTCGAGGCGGACATGTAGTCCCCGGCCAGCGCCAGGCCGTTCTGCCAGCCCTGGATGCCGCCACCGGCGCTGTAGAAGTCTGTCGTCGAGCGTGTGCGACGCGCCGCCCACCAGGTGATGCACAAGGTGAACAGCACGAACACCATG  <  4:34565/149‑1                                                                                                                                                                                                                                                                                                            CCTGCTGCTGGCTTCGCCTTCGCTCGACGCTGGTCAGCGTCAGCCGCTCAACCTGCATGCCATCGGCATGTTCATGGTGTTCGTGCTGTTCACCTTGTGCATCACCTGGTGGGCGGCGCGTCGCACACGCTCGACGACAGACTTCTACAGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/3186426‑3186577 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acagcgTCGAGGCGGACATGTAGTCCCCGGCCAGCGCCAGGCCGTTCTGCCAGCCCTGGATGCCGCCACCGGCGCTGTAGAAGTCTGTCGTCGAGCGTGTGCGACGCGCCGCCCACCAGGTGATGCACAAGGTGAACAGCACGAACACCATG  <  NC_002947/3186643‑3186498

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.