New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	3491028 =	47 (0.800)	4 (0.070)	4/242	NT	9.2%	coding (363/2637 nt)	clpV	protein ClpV1
	?	NC_002947	3491058 =	35 (0.630)					coding (333/2637 nt)	clpV	protein ClpV1

GGTCGTCGCCGAACGCCTGCAAGCGCAGCTGGTCACCGCCCTGGGCACCTTCAAGAAAGGTAATACCCGCACCCCGGCGCTGTCGCCGCACATTACCCGCATGATCGAGCAAGCCTGGTTGCTGGCCTCGATCGAATACGGCGTAGGCCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/3491178‑3491028 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aggccagCAACCAGGCTTGCTCGATCATGCGGGTAATGTGCGGCGACAGCGCCGGGGTGCGGGTATTACCTTTCTTGAAGGTGCCCAGGGCGGTGACCAGCTGCGCTTGCAGGCGTTCGGCGACGACCTGGTAGTGGCGCAGGATCGGCGCCAG  >  NC_002947/3491058‑3491204                                                                                                                                                                                                                                                                                                            GGTCGTCGCCGAACGCCTGCAAGCGCAGCTGGTCACCGCCCTGGGCACCTTCAAGAAAGGTAATACCCGCACCCCGGCGCTGTCGCCGCACATTACCCGCATGATCGAGCAAGCCTGGTTGCTGGCCTCGATCGAATACGGCGTAGGCC                                                                                                                                                       <  3:67837/149‑1                                                                                                                       TTGCTGGCCTCGATCGAATACGGCGTAGGCCAGCAACCAGGCTTGCTCGATCATGCGGGTAATGTGCGGCGACAGCGCCGGGGTGCGGGTATTACCTTTCTTGAAGGTGCCCAGGGCGGTGACCAG                                                        >  5:260940/1‑126                                                                                                                       TTGCTGGCCTCGATCGAATACGGCGTAGGCCAGCAACCAGGCTTGCTCGATCATGCGGGTAATGTGCGGCGACAGCGCCGGGGTGCGGGTATTACCTTTCTTGAAGGTGCCCAGGGCGGTGACCAG                                                        <  6:260940/126‑1                                                                                                                         GCTGGCCTCGATCGAATACGGCGTAGGCCAGCAACCAGGCTTGCTCGATCATGCGGGTAATGTGCGGCGACAGCGCCGGGGTGCGG                                                                                              <  5:195523/86‑1                                                                                                                         GCTGGCCTCGATCGAATACGGCGTAGGCCAGCAACCAGGCTTGCTCGATCATGCGGGTAATGTGCGGCGACAGCGCCGGGGTGCGG                                                                                              >  6:195523/1‑86                                                                                                                                                     CAGCAACCAGGCTTGCTCGATCATGCGGGTAATGTGCGGCGACAGCGCCGGGGTGCGGGTATTACCTTTCTTGAAGGTGCCCAGGGCGGTGACCAGCTGCGCTTGCAGGCGTTCGGCGACGACCTGGTAGTGGCGCAGGATCGGCGCCA   <  2:370368/149‑1                                                                                                                                                      AGCAACCAGGCTTGCTCGATCATGCGGGTAATGTGCGGCGACAGCGCCGGGGTGCGGGTATTACCTTTCTTGAAGGTGCCCAGGGCTGTGACCAGCTGCGCTTGCAGGCGTTCGGCGACGACCTGGTAGTGGCGCAGGATCGGCGCCAG  <  4:324424/149‑1                                                                                                                                                      AGCAACCAGGCTTGCTCGATCATGCGGGTAATGTGCGGCGACAGCGCCGGGGTGCGGGTATTACCTTTCTTGAAGGTGCCCAGGGCGGTGACCAGCTGCGCTTGCAGGCGTTCGGCGACGACCTGGTAGTGGCGCAGGATCGGCGCCAG  >  8:240857/1‑149                                                                                                                                                                                                                                                                                                            GGTCGTCGCCGAACGCCTGCAAGCGCAGCTGGTCACCGCCCTGGGCACCTTCAAGAAAGGTAATACCCGCACCCCGGCGCTGTCGCCGCACATTACCCGCATGATCGAGCAAGCCTGGTTGCTGGCCTCGATCGAATACGGCGTAGGCCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/3491178‑3491028 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aggccagCAACCAGGCTTGCTCGATCATGCGGGTAATGTGCGGCGACAGCGCCGGGGTGCGGGTATTACCTTTCTTGAAGGTGCCCAGGGCGGTGACCAGCTGCGCTTGCAGGCGTTCGGCGACGACCTGGTAGTGGCGCAGGATCGGCGCCAG  >  NC_002947/3491058‑3491204

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.