New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 3672982	42 (0.710)	3 (0.050)	3/240	NT	6.3%	coding (30/891 nt)	PP_3237	universal stress protein family protein
	?	NC_002947	= 3673037	50 (0.900)					coding (85/891 nt)	PP_3237	universal stress protein family protein

CCAAGCGCCAAGGGCGGCATGAACTGGATGCTGGCAGCAGCAGTCAATCACTGCCCGCCGAAAGCCCCCTCTCGATGCAACCCGAGCGACCTGAGTGATCAGGCCGGCCCACCGTTGGAGGTAATCATGAGCCACTATCAACGCCTGTTGCTGATC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/3672827‑3672982 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgctgatcGGGCCAGTGCACCGGCCTGCTCCAGGGCGACCGCCTGGTGCAGCATTGGGCGCATGATCAGCAACAGGCGTTGATAGTGGCTCATGATTACCTCCAACGGTGGGCCGGCCTGATCACTCAGGTCGCTCGGGTTGCATCGAGAGGGG  <  NC_002947/3673037‑3672892                                                                                                                                                                                                                                                                                                                CCAAGCGCCAAGGGCGGCATGAACTGGATGCTGGCAGCAGCAGTCAATCACTGCCCGCCGAAAGCCCCCTCTCGATGCAACCCGAGCGACCTGAGTGATCAGGCCGGCCCACCGTTGGAGGTAATCATGAGCCACTATCAACGCCTGTT                                                                                                                                                           >  6:73549/1‑149  CAAGCGCCAAGGGCGGCATGAACTGGATGCTGGCAGCAGCAGTCAATCACTGCCCGCCGAAAGCCCCCTCTCGATGCAACCCGAGCGACCTGAGTGATCAGGCCGGCCCACCGTTGGAGGTAATCATGAGCCACTATCAACGCCTGTTG                                                                                                                                                          >  3:208567/1‑149   AAGCGCCAAGGGCGGCATGAACTGGATGCTGGCAGCAGCAGTCAATCACTGCCCGCCGAAAGCCCCCTCTCGATGCAACCCGAGCGACCTGAGTGATCAGGCCGGCCCACCGTTGGAGGTAATCATGAGCCACTATCAACGCCTGTTGC                                                                                                                                                         >  3:324923/1‑149   AAGCGCCAAGGGCGGCATGAACTGGATGCTGGCAGCAGCAGTCAATCACTGCCCGCCGAAAGCCCCCTCTCGATGCAACCCGAGCGACCTGAGTGATCAGGCCGGCCCACCGTTGGAGGTAATCATGAGCCACTATCAACGCCTGTTGC                                                                                                                                                         <  7:243493/149‑1                            ATGCTGGCAGCAGCAGTCAATCACTGCCCGCCGAAAGCCCCCTCTCGATGCAACCCGAGCGACCTGAGTGAACAGGCCGGCCCACCGTTGGAGGTAATCATGAGCCACTATCAACGCCTGTTG                                                                                                                                                          >  3:263318/1‑123                            ATGCTGGCAGCAGCAGTCAATCACTGCCCGCCGAAAGCCCCCTCTCGATGCAACCCGAGCGACCTGAGTGAACAGGCCGGCCCACCGTTGGAGGTAATCATGAGCCACTATCAACGCCTGTTG                                                                                                                                                          <  4:263318/123‑1                              GCTGGCAGCAGCAGTCAATCACTGCCCGCCGAAAGCCCCCTCTCGATGCAACCCGAGCGACCTGAGTGATCAGGCCGGCCCACCGTTGGAGGTAATCATGAGCCACTATCAACGCCTGTTGCTGATC                                                                                                                                                    >  5:262256/1‑127                              GCTGGCAGCAGCAGTCAATCACTGCCCGCCGAAAGCCCCCTCTCGATGCAACCCGAGCGACCTGAGTGATCAGGCCGGCCCACCGTTGGAGGTAATCATGAGCCACTATCAACGCCTGTTGCTGATC                                                                                                                                                    <  6:262256/127‑1                                                                          GATGCAACCCGAGCGACCTGAGTGATCAGGCCGGCCCACCGTTGGAGGTAATCATGAGCCACTATCAACGCCTGTTGCTGATCGGGCCAGTGCACCGGCCTGCTCCAGGGCGACCGCCTGGTGCAGCATTGGGCGCATGATCAGCAA                                                                                    <  4:324923/147‑1                                                                                                             CCACCGTTGGAGGTAATCATGAGCCACTATCAACGCCTGTTGCTGATCGGGCCAGTGCACCGGCCTGCTCCAGGGCGACCGCCTGGTGCAGCATTGGGCGCATGATC                                                                                         <  3:264085/107‑1                                                                                                             CCACCGTTGGAGGTAATCATGAGCCACTATCAACGCCTGTTGCTGATCGGGCCAGTGCACCGGCCTGCTCCAGGGCGACCGCCTGGTGCAGCATTGGGCGCATGATC                                                                                         >  4:264085/1‑107                                                                                                                                                       CTGATCGGGCCAGTGCACCGGCCTGCTCCAGGGCGACCGCCTGGTGCAGCATTGGGCGCATGATCAGCAACAGGCGTTGATAGTGGCTCATGATTACCTCCAACGGTGGGCCGGCCTGATCACTCAGGTCGCTCGGGTTGCATCGAGAG     <  2:134875/149‑1                                                                                                                                                       CTGATCGGGCCAGTGCACCGGCCTGCTCCAGGGCGACCGCCTGGTGCAGCATTGGGCGCATGATCAGCAACAGGCGTTGATAGTGGCTCATGATTACCTCCAACGGTGGGCCGGCCTGATCACTCAGGTCGCTCGGGTTGCATCGAGA      <  1:178102/148‑1                                                                                                                                                          ATCGGGCCAGTGCACCGGCCTGCTCCAGGGCGACCGCCTGGTGCAGCATTGGGCGCATGATCAGCAACAGGCGTTGATAGTGGCTCATGATTACCTCCAACGGTGGGCCGGCCTGATCACTCAGGTCGCTCGGGTTGCATCGAGAGGGG  >  4:208567/1‑149                                                                                                                                                          ATCGGGCCAGTGCACCGGCCTGCTCCAGGGCGACCGCCTGGTGCAGCATTGGGCGCATGATCAGCAACAGGCGTTGATAGTGGCTCATGATTACCTCCAACGGTGGGCCGGCCTGATCACTCAGGTCGCTCGGGTTGCATCGAGAGGG   <  4:32709/148‑1                                                                                                                                                                                                                                                                                                                CCAAGCGCCAAGGGCGGCATGAACTGGATGCTGGCAGCAGCAGTCAATCACTGCCCGCCGAAAGCCCCCTCTCGATGCAACCCGAGCGACCTGAGTGATCAGGCCGGCCCACCGTTGGAGGTAATCATGAGCCACTATCAACGCCTGTTGCTGATC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/3672827‑3672982 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgctgatcGGGCCAGTGCACCGGCCTGCTCCAGGGCGACCGCCTGGTGCAGCATTGGGCGCATGATCAGCAACAGGCGTTGATAGTGGCTCATGATTACCTCCAACGGTGGGCCGGCCTGATCACTCAGGTCGCTCGGGTTGCATCGAGAGGGG  <  NC_002947/3673037‑3672892

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.