New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 367298242 (0.710)3 (0.050) 3/240 NT 6.3% coding (30/891 nt) PP_3237 universal stress protein family protein
?NC_002947 = 3673037 50 (0.900)coding (85/891 nt) PP_3237 universal stress protein family protein

CCCCTCTCGATGCAACCCGAGCGACCTGAGTGATCAGGCCGGCCCACCGTTGGAGGTAATCATGAGCCACTATCAACGCCTGTTGCTGATCATGCGCCCAATGCTGCACCAGGCGGTCGCCCTGGAGCAGGCCGGTGCACTGGCCCGATCAGCATCGGCCAGCTTGCACATTGTCGCCTTGCTCGAAGCACTGGACAAACTCTGGCTACTGGAGTCCGGTAAGCACCAAACGGAGCGGGAGGCTTACCGGCACACTCAGCAGCAACAGCTGGAAACCCAGGCGAACGCG  >  NC_002947/3672892‑3673180
                                                                                                                                                  |                                                                                                                                               
ccccTCTCGATGCAACCCGAGCGACCTGAGTGATCAGGCCGGCCCACCGTTGGAGGTAATCATGAGCCACTATCAACGCCTGTTGCTGATCATGCGCCCAATGCTGCACCAGGCGGTCGCCCTGGAGCAGGCCGGTGCACTGGCCCgat                                                                                                                                              >  4:208567‑M2/1‑146 (MQ=255)
 cccTCTCGATGCAACCCGAGCGACCTGAGTGATCAGGCCGGCCCACCGTTGGAGGTAATCATGAGCCACTATCAACGCCTGTTGCTGATCATGCGCCCAATGCTGCACCAGGCGGTCGCCCTGGAGCAGGCCGGTGCACTGGCCCgat                                                                                                                                              <  4:32709‑M2/148‑4 (MQ=255)
   ctctCGATGCAACCCGAGCGACCTGAGTGATCAGGCCGGCCCACCGTTGGAGGTAATCATGAGCCACTATCAACGCCTGTTGCTGATCATGCGCCCAATGCTGCACCAGGCGGTCGCCCTGGAGCAGGCCGGTGCACTGGCCCgatcag                                                                                                                                           <  2:134875‑M2/149‑7 (MQ=255)
    tctcGATGCAACCCGAGCGACCTGAGTGATCAGGCCGGCCCACCGTTGGAGGTAATCATGAGCCACTATCAACGCCTGTTGCTGATCATGCGCCCAATGCTGCACCAGGCGGTCGCCCTGGAGCAGGCCGGTGCACTGGCCCgatcag                                                                                                                                           <  1:178102‑M2/148‑7 (MQ=255)
        gATGCAACCCGAGCGACCTGAGTGATCAGGCCGGCCCACCGTTGGAGGTAATCATGAGCCACTATCAACGCCTGTTGCTGATCATGCGCCCAATGCTGCACCAGGCGGTCGCCCTGGAGCAGGCCGGTGCACTGGCCCGATCAGCATCg                                                                                                                                      >  7:86423/1‑149 (MQ=255)
            cAACCCGAGCGACCTGAGTGATCAGGCCGGCCCACCGTTGGAGGTAATCATGAGCCACTATCAACGCCTGTTGCTGATCATGCGCCCAATGCTGCACCAGGCGGTCGCCCTGGAGCAGGCCGGTGCACTGGCCCGATCAGCATCGGCCa                                                                                                                                  <  1:335791/149‑1 (MQ=255)
             aaCCCGAGCGACCTGAGTGATCAGGCCGGCCCACCGTTGGAGGTAATCATGAGCCACTATCAACGCCTGTTGCTGATCATGCGCCCAATGCTGCACCAGGCGGTCGCCCTGGAGCAGGCCGGTGCACTGGCCCGATCAGCATCGGCCAg                                                                                                                                 >  8:192279/1‑149 (MQ=255)
              aCCCGAGCGACCTGAGTGATCAGGCCGGCCCACCGTTGGAGGTAATCATGAGCCACTATCAACGCCTGTTGCTGATCATGCGCCCAATGCTGCACCAGGCGGTCGCCCTGGAGCAGGCCGGTGCACTGGCCCGATCAGCATCGGCCAGc                                                                                                                                >  5:128574/1‑149 (MQ=255)
                          tGAGTGATCAGGCCGGCCCACCGTTGGAGGTAATCGATGAGCCACTATCAACGCCTGTTGCTGATCATGCGCCCAATGCTGCACCAGGCGGTCGCCCTGGAGCAGGCCGGTGCACTGGCCCGATCAGCATc                                                                                                                                       >  1:248034/1‑131 (MQ=255)
                          tGAGTGATCAGGCCGGCCCACCGTTGGAGGTAATCATGAGCCACTATCAACGCCTGTTGCTGATCATGCGCCCAATGCTGCACCAGGCGGTCGCCCTGGAGCAGGCCGGTGCACTGGCCCGATCAGCATc                                                                                                                                       <  2:248034/130‑1 (MQ=255)
                              tGATCAGGCCGGCCCACCGTTGGAGGTAATCATGAGCCACTATCAACGCCTGTTGCTGATCATGCGCCCAATGCTGCACCAGGCGGTCGCCCTGGAGCAGGCCGGTGCACTGGCCCGATCAGCATCGGCCAGCTTGCACATTGTCGCCt                                                                                                                <  3:32709/149‑1 (MQ=255)
                                 tCAGGCCGGCCCACCGTTGGAGATAATCATGAGCCACTATCAACGCCTGTTGCTGATCATGCGCCCAATGCTGCACCAGGCGGTCGCCCTGGCGCAGGCCGGTGCACTGGCCCGATCAGCATCGGCCAGCTTGCACATTGTCGCCTTGc                                                                                                             >  1:50445/1‑149 (MQ=255)
                                     gccggccCACCGTTGGAGGTAATCATGAGCCACTATCAACGCCTGTTGCTGATCATGCGCCCAATGCTGCACCAGGCGGTCGCCCTGGAGCAGGCCGGTGCACTGGCCCGATCAGCATCGGCCAGCTTGCACATTGTCGCCTTGCTCg                                                                                                          >  4:170504/1‑148 (MQ=255)
                                      ccggccCACCGTTGGAGGTAATCATGAGCCACTATCAACGCCTGTTGCTGATCATGCGCCCAATGCTGCACCAGGCGGTCGCCCTGGAGCAGGCCGGTGCACTGGCCCGATCAGCATCGGCCAGCTTGCACATTGTCGCCTTGCTCGaa                                                                                                        <  1:134875/149‑1 (MQ=255)
                                         gccCACCGTTGGAGGTTATCATGAGCCACTATCAACGCCTGTTGCTGATCATGCGCCCAATGCTGCACCAGGCGGTCGCCCTGGAGCAGGCCGGTGCACTGGCCCGATCAGCATCGGCCCGCTTGAAAATTGTCGCCGTGGTAGACGCa                                                                                                     >  4:310149/1‑149 (MQ=255)
                                             aCCGTTGGAGGTAATCATGAGCCACTATCAACGCCTGTTGCTGATCATGCGCCCAATGCTGCACCAGGCGGTCGCCCTGGAGCAGGCCGGTGCACTGGCCCGATCAGCATCGGCCAGCTTGCACATTGTCGCCTTGCTCGAAGCACTg                                                                                                  <  8:218022/148‑1 (MQ=255)
                                             aCCGTTGGAGGTAATCATGAGCCACTATCAACGCCTGTTGCTGATCATGCGCCCAATGCTGCACCAGGCGGTCGCCCTGGAGCAGGCCGGTGCACTGGCCCGATCAGCATCGGCCAGCTTGCACATTGTCGCCTTGCTCGAAGCACTg                                                                                                  >  7:218022/1‑148 (MQ=255)
                                                   ggAGGTAATCATGAGCCACTATCAACGCCTGTTGCTGATCATGCGCCCAATGCTGCACCAGGCGGTCGCCCTGGAGCAGGCCGGTGCACTGGCCCGATCAGCATCGGCCAGCTTGcaca                                                                                                                         <  2:211374/119‑1 (MQ=255)
                                                   ggAGGTAATCATGAGCCACTATCAACGCCTGTTGCTGATCATGCGCCCAATGCTGCACCAGGCGGTCGCCCTGGAGCAGGCCGGTGCACTGGCCCGATCAGCATCGGCCAGCTTGCACATTGTCGCCTTGCTCGAAGCACTGGACaaa                                                                                            <  6:128574/148‑1 (MQ=255)
                                                       gTAATCATGAGCCACTATCAACGCCTGTTGCTGATCATGCGCCCAATGCTGCACCAGGCGGTCGCCCTGGAGCAGGCCGGTGCACTGGCCCGATCAGCATCGGCCAGCTTGCACATTGTCGCCTTGCTCGAAGCACTGGACAAACTCTg                                                                                       <  6:70125/149‑1 (MQ=255)
                                                        tAATCATGAGCCACTATCAACGCCTGTTGCTGATCATGCGCCCAATGCTGCACCAGGCGGTCGCCCTGGAGCAGGCCGGTGCACTGGCCCGATCAGCATCGGCCAGCTTGCACATTGTCGCCTTGCTCGAAGCACTGGACAAACTCTgg                                                                                      <  3:27528/149‑1 (MQ=255)
                                                         aaTCATGAGCCACTATCAACGCCTGTTGCTGATCATGCGCCCAATGCTGCACCAGGCGGTCGCCCTGGAGCAGGCCGGTGCACTGGCCCGATCAGCATCGGCCAGCTTGCACATTGTCGCCTTGCTCGAAGCACTGGACAAACTCTGGc                                                                                     >  4:188043/1‑149 (MQ=255)
                                                           tCATGAGCCACTATCAACGCCTGTTGCTGATCATGCGCCCAATGCTGCACCAGGCGGTCGCCCTGGAGCAGGCCGGTGCACTGGCCCGATCAGCATCGGCCAGCTTGCACATTGTCGCCTTGCTCGAAGCACTGGACAAActct                                                                                        >  6:157824/1‑144 (MQ=255)
                                                           tCATGAGCCACTATCAACGCCTGTTGCTGATCATGCGCCCAATGCTGCACCAGGCGGTCGCCCTGGAGCAGGCCGGTGCACTGGCCCGATCAGCATCGGCCAGCTTGCACATTGTCGCCTTGCTCGAAGCACTGGACAAActct                                                                                        <  5:157824/144‑1 (MQ=255)
                                                               tGAGCCACTATCAACGCCTGTTGCTGATCATGCGCCCAATGCTGCACCAGGCGGTCGCCCTGGAGCAGGCCGGTGCTCTGGCCCGATCAGCATCGGCCAGCTTGCACATTGTCGCCTTGCTCGAAGCACTGGACAAACTCTGGCTACTg                                                                                <  3:56103/149‑1 (MQ=255)
                                                               tGAGCCACTATCAACGCCTGTTGCTGATCATGCGCCCAATGCTGCACCAGGCGGTCGCCCTGGAGCAGGCCGGTGCACTGGCCCGATCAGCATCGGCCAGCTTGCACATTGTCGCCTTGCTCGAAGCACTGGACAAACTCTGGCTACTg                                                                                >  3:221329/1‑149 (MQ=255)
                                                                gAGCCACTATCAACGCCTGTTGCTGATCATGCGCCCAATGCTGCCCCAGGCGGTCGCCCTGGAGCAGGCCGGTGCACTGGCCCGATCAGCATCGGCCAGCTTGCCCATTGTCGCCTTGCTCGAAGCACTGGACAAACTCTGGCTACTg                                                                                >  8:237541/1‑148 (MQ=255)
                                                                 aGCCACTATCAACGCCTGTTGCTGATCATGCGCCCAATGCTGCACCAGGCGGTCGCCCTGGAGCAGGCCGGTGCACTGGCCCGATCAGCATCGGCCAGCTTGCACATTGTCGCCTTGCTCGAAGCACTGGACAAACTCTGGCTACTGGa                                                                              <  7:192279/149‑1 (MQ=255)
                                                                           aaCGCCTGTTGCTGATCATGCGCCCAATGCTGCACCAGGCGGTCGCCCTGGAGCAGGCCGGTGCACTGGCCCGATCAGCATCGGCCAGCTTGca                                                                                                                           <  1:265386/94‑1 (MQ=255)
                                                                           aaCGCCTGTTGCTGATCATGCGCCCAATGCTGCACCAGGCGGTCGCCCTGGAGCAGGCCGGTGCACTGGCCCGATCAGCATCGGCCAGCTTGca                                                                                                                           >  2:265386/1‑94 (MQ=255)
                                                                           aaCGCCTGTTGCTGATCATGCGCCCAATGCTGCACCAGGCGGTCGCCCTGGAGCAGGCCGGTGCACTGGCCCGATCAGCATCGGCCAGCTTGCACATTGTCGCCTTGCTCGAAGCACTGGACAAACTCTGGCTACTGGAGTCCGGTAAg                                                                    <  8:86423/149‑1 (MQ=255)
                                                                                cTGTTGCTGATCATGCGCCCAATGCTGCACCAGGCGGTCGCCCTGGAGCAGGCCGGTGCACTGGCCCGATCAGCATCGGCCAGCTTGCACATTGTCGCCTTGCTCGAAGCACTGGACAAACTCTGGCTACTg                                                                                <  4:315162/132‑1 (MQ=255)
                                                                                cTGTTGCTGATCATGCGCCCAATGCTGCACCAGGCGGTCGCCCTGGAGCAGGCCGGTGCACTGGCCCGATCAGCATCGGCCAGCTTGCACATTGTCGCCTTGCTCGAAGCACTGGACAAACTCTGGCTACTg                                                                                >  3:315162/1‑132 (MQ=255)
                                                                                  gTTGCTGATCATGCGCCCAATGCTGCACCAGGCGGTCGCCCTGGAGCAGGCCGGTGCACTGGCCCGATCAGCATCGGCCAGCTTGCACATTGTCGCCTTGCTCGAAGCACTGGACAAACTCTGGCTACTGGAGTCCgg                                                                        >  4:266673/1‑138 (MQ=255)
                                                                                  gTTGCTGATCATGCGCCCAATGCTGCACCAGGCGGTCGCCCTGGAGCAGGCCGGTGCACTGGCCCGATCAGCATCGGCCAGCTTGCACATTGTCGCCTTGCTCGAAGCACTGGACAAACTCTGGCTACTGGAGTCCgg                                                                        <  3:266673/138‑1 (MQ=255)
                                                                                   ttGCTGATCATGCGCCCAATGCTGCACCAGGCGGTCGCCCTGGAGCAGGCCGGTGCACTGGCCCgatcagcaacaggcgttgatagtggctcatgattacctccaacggtgggccggcctgatcactcaggtcgctcgggttgcatc                                                              <  4:324923‑M2/147‑84 (MQ=255)
                                                                                      cTGATCATGCGCCCAATGCTGCACCAGGCGGTCGCCCTGGAGCAGGCCGGTGCACTGGCCCGATCAGCATCGGCCAGCTTGCACATTGTCGCCTTGCTCGAAGCACTGGACAAACTCTGGCTACTGGAGTCCGGTAAGCACCAAACGGa                                                         <  2:50445/149‑1 (MQ=255)
                                                                                        gATCATGCGCCCAATGCTGCACCAGGCGGTCGCCCTGGAGCAGGCCGGTGCACTGGCCCgatcagcaacaggcgttgatagtggctcatgattacctccaacggtgg                                                                                                 >  4:264085‑M2/1‑59 (MQ=255)
                                                                                        gATCATGCGCCCAATGCTGCACCAGGCGGTCGCCCTGGAGCAGGCCGGTGCACTGGCCCgatcagcaacaggcgttgatagtggctcatgattacctccaacggtgg                                                                                                 <  3:264085‑M2/107‑49 (MQ=255)
                                                                                         aTCATGCGCCCAATGCTGCACCAGGCGGTCGCCCTGGAGCAGGCCGGTGCACTGGCCCGATCAGCATCGGCCAGCTTGCACATTGTCGCCTTGCTCGAAGCACTGGACAAACTCTGGCTACTGGAGTCCGGTAAGCACCAAACGGAg                                                        <  1:101418/147‑1 (MQ=255)
                                                                                            aTGCGCCCAATGCTGCACCAGGCGGTCGCCCTGGAGCAGGCCGGTGCACTGGCCCGATCAGCATCGGCCAGCTTGCACATTGTCGCCTTGCTCGAAGCACTGGACAAACTCTGGCTACTGGAGTCCGGTAAGCACCAAACGGAGCgg                                                     >  2:302275/1‑147 (MQ=255)
                                                                                            aTGCGCCCAATGCTGCACCAGGCGGTCGCCCTGGAGCAGGCCGGTGCACTGGCCCGATCAGCATCGGCCAGCTTGCACATTGTCGCCTTGCTCGAAGCACTGGACAAACTCTGGCTACTGGAGTCCGGTAAGCACCAAACGGAGCGGGa                                                   <  8:68048/149‑1 (MQ=255)
                                                                                            aTGCGCCCAATGCTGCACCAGGCGGTCGCCCTGGAGCAGGCCGGTGCACTGGCCCGATCAGCATCGGCCAGCTTGCACATTGTCGCCTTGCTCGAAGCACTGGACAAACTCTGGCTACTGGAGTCCGGTAAGCACCAAACGGAGCGGGa                                                   <  2:113526/149‑1 (MQ=255)
                                                                                              gcgcCCAATGCTGCACCAGGCGGTCGCCCTGGAGCAGGCCGGTGCACTGGCCCGATCAGCATCGGCCAGCTTGCACATTGTCGCCTTGCTCGAAGCACTGGACAAACTCTGGCTACTGGAGTCCGGTAAGCACCAAACGGAGCGGGAgg                                                 >  4:60986/1‑149 (MQ=255)
                                                                                                 cccAATGCTGCACCAGGCGGTCGCCCTGGAGCAGGCCGGTGCACTGGCCCGATCAGCATCGGCCAGCTTGCACATTGTCGCCTTGCTCGAAg                                                                                                       <  2:197474/92‑1 (MQ=255)
                                                                                                 cccAATGCTGCACCAGGCGGTCGCCCTGGAGCAGGCCGGTGCACTGGCCCGATCAGCATCGGCCAGCTTGCACATTGTCGCCTTGCTCGAAg                                                                                                       >  1:197474/1‑92 (MQ=255)
                                                                                                 cccAATGCTGCACCAGGCGGTCGCCCTGGAGCAGGCCGGTGCACTGGCCCGATCAGCATCGGCCAGCTTGCACATTGTCGCCTTGCTCGAAGCACTGGACAAACTCTGGCTACTGGAGTCCGGTAAGCACCAAACGGAGCGGGAGGCt                                               >  7:269050/1‑148 (MQ=255)
                                                                                                   cAATGCTGCACCAGGCGGTCGCCCTGGAGCAGGCCGGTGCACTGGCCCGATCAGCATCGGCCAGCTTGCACATTGTCGCCTTGCTCGAAGCACTGGACAAACTCTGGCTACTGGAGTCCGGTAAGCACCAAACGGAGCGGGAGGCTTAc                                            <  8:269050/149‑1 (MQ=255)
                                                                                                      tgctgcACCAGGCGGTCGCCCTGGAGCAGGCCGGTGCACTGGCCCGATCAGCATCGGCCAGCTTGCACATTGTCGCCTTGCTCGAAGCACTGGACAAACTCTGGCTACTGGAGTCCGGTAAGCACCAAACGGAGCGGGAGGCTTACCgg                                         <  4:221329/149‑1 (MQ=255)
                                                                                                          gcACCAGGCGGTCGCCCTGGAGCAGGCCGGTGCACTGGCCCGATCAGCATCGGCCAGCTTGCACATTGTCGCCTTGCTCGAAGCACTGGACAAACTCTGGCTACTGGAGTCCGGTAAGCACCAAACGGAGCGGGAGGCTTACCGGcaca                                     <  3:170504/149‑1 (MQ=255)
                                                                                                           cACCAGGCGGTCGCCCTGGAGCAGGCCGGTGCACTGGCCCGATCAGCATCGGCCAGCTTGCACATTGTCGCCTTGCTCGAAGCACTGGACAAACTCTGGCTACTGGAGTCCGGTAAGCACCAAACGGAGCGGGAGGCTTACCGGCccac                                    >  5:20778/1‑149 (MQ=255)
                                                                                                                ggCGGTCGCCCTGGAGCAGGCCGGTGCACTGGCCCGATCAGCATCGGCCAGCTTGCACATTGTCGCCTTGCTCGAAGCACTGGACAAACTCTGGCTACTGGAGTCCGGTAAGCACCAAACGGAGCGGGAGGCTTACCGGCACACTcag                                >  6:120860/1‑148 (MQ=255)
                                                                                                                       gCCCTGGAGCAGGCCGGTGCACTGGCCCGATCAGCATCGGCCAGCTTGCACATTGTCGCCTTGCTCGAAGCACTGGACAAACTCTGGCTACTGGAGTCCGGTAAGCACCAAACGGAGCGGGAGGCTTACCGGCACACTCAGCAGCaa                          >  3:278584/1‑147 (MQ=255)
                                                                                                                         ccTGGAGCAGGCCGGTGCACTGGCCCGATCAGCATCGGCCAGCTTGCACATTGTCGCCTTGCTCGAAGCACTGGACAAACTCTGGCTACTGGAGTCCGGTAAGCACCAAACGGAGCGGGAGGCTTACCGGCACACTCAGCAGCAACAGc                      >  5:384423/1‑149 (MQ=255)
                                                                                                                            ggAGCAGGCCGGTGCACTGGCCCGATCAGCATCGGCCAGCTTGCACATTGTCGCCTTGCTCGAAGCACTGGACAAACTCTGGCTACTGGAGTCCGGTAAGCACCAAACGGAGCGGGAGGCTTACCGGCACACTc                                  <  6:368441/134‑1 (MQ=255)
                                                                                                                            ggAGCAGGCCGGTGCACTGGCCCGATCAGCATCGGCCAGCTTGCACATTGTCGCCTTGCTCGAAGCACTGGACAAACTCTGGCTACTGGAGTCCGGTAAGCACCAAACGGAGCGGGAGGCTTACCGGCACACTc                                  >  5:368441/1‑134 (MQ=255)
                                                                                                                               gCAGGCCGGTGCACTGGCCCGATCAGCATCGGCCAGCTTGCACATTGTCGCCTTGCTCGAAGCACTGGACAAACTCTGGCTACTGGAGTCCGGTAAGCACCAAACGGAGCGGGAGGCTTACCGGCACACTCAGCAGCAACAGCTGGaaa                <  3:188043/149‑1 (MQ=255)
                                                                                                                                  ggCCGGTGCACTGGCCCGATCAGCATCGGCCAGCTTGCACATTGTCGCCTTGCTCGAAGCACTGGACAAACTCTGGCTACTGTAGTCCGGTAAGCACCAAACGGAGCGGGAGGCTTACCGGCACACTCAGCAGCAACAGCTGGAAAccc             <  1:302275/149‑1 (MQ=255)
                                                                                                                                          cACTGGCCCGATCAGCATCGGCCAGCTTGCACATTGTCGCCTTGCTCGAAGCACTGGACAAACTCTGGCTACTGGAGTCCGGTAAGCACCAAACGGAGCGGGAGGCTTACCGGCACACTCAGCAGCAACAGCTGGAAACCCAGGCGAAc     <  2:178102/149‑1 (MQ=255)
                                                                                                                                             tGGCCCGATCAGCATCGGCCAGCTTGCACATTGTCGCCTTGCTCGAAGCACTGGACAAACTCTGGCTACTGGAGTCCGGTAAGCACCAAACGGAGCGGGAGGCTTACCGGCACACTCAGCAGCAACAGCTGGAAACCCAGGCGAAcgcg  >  6:307700/1‑149 (MQ=255)
                                                                                                                                                  |                                                                                                                                               
CCCCTCTCGATGCAACCCGAGCGACCTGAGTGATCAGGCCGGCCCACCGTTGGAGGTAATCATGAGCCACTATCAACGCCTGTTGCTGATCATGCGCCCAATGCTGCACCAGGCGGTCGCCCTGGAGCAGGCCGGTGCACTGGCCCGATCAGCATCGGCCAGCTTGCACATTGTCGCCTTGCTCGAAGCACTGGACAAACTCTGGCTACTGGAGTCCGGTAAGCACCAAACGGAGCGGGAGGCTTACCGGCACACTCAGCAGCAACAGCTGGAAACCCAGGCGAACGCG  >  NC_002947/3672892‑3673180

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.