New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 3676847 = | 45 (0.760) | 3 (0.050) | 3/244 | NT | 6.7% | intergenic (‑2/‑151) | PP_3241/PP_3242 | hypothetical protein/GGDEF domain‑containing protein |
? | NC_002947 | 3676903 = | 40 (0.710) | intergenic (‑58/‑95) | PP_3241/PP_3242 | hypothetical protein/GGDEF domain‑containing protein |
GAATCCCTGGCCCTACGGCGTTCGCCGTCTTCACTATAGTTCAGCGTCGCACGGCCGGAACCGGCGGCAAAAAAGATTAAACCTTTTCCCCGCCTTCACCCTCAACCGTACGCGACATTGAGGTCGCGCCACGGTTTAAAGGAGTGAAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3676995‑3676847 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtgaagGCGGGGAAAAGGTTTAATCTTTTTTGCCGCCGGTTCCGGCCGTGCGACGCTGAACTATAGTGAAGACGGCGAACGCCGTAGGGCCAGGGATTCCAATGTGCGCAGCCAGGAAACAGGACGACGATGGGCTTTTCGCCATCAGTGGC > NC_002947/3676903‑3677048 GAATCCCTGGCCCTACGGCGTTCGCCGTCTTCACTATAGTTCAGCGTCGCACGGCCGGAACCGGCGGCAAAAAAGATTAAACCTTTTCCCCGCCTTCACCCTCAACCGTACGCGACATTGAGGTCGCGCCACGGTTTAAAGGAGTGAAG > 8:342329/1‑149 AACCTTTTCCCCGCCTTCACCCTCAACCGTACGCGACATTGAGGTCGCGCCACGGTTTAAAGGAGTGAAGGCGGGGAAAAGGTTTAATCTTTTTTGCCGCCGGTTCCGGCCGTGCGACGCTG > 1:231920/1‑122 AACCTTTTCCCCGCCTTCACCCTCAACCGTACGCGACATTGAGGTCGCGCCACGGTTTAAAGGAGTGAAGGCGGGGAAAAGGTTTAATCTTTTTTGCCGCCGGTTCCGGCCGTGCGACGCTG < 2:231920/122‑1 CCCCGCCTTCACCCTCAACCGTACGCGACATTGAGGTCGCGCCACGGTTTAAAGGAGTGAAGGCGGGGAAAAGGTTTAATCTTTTTTGCCGCCGGTTCCGGCCGTGCGACGCTGAACTATAGTGAAGACGGCGAACGCCGTAGGGCCAG > 8:4405/1‑149 AGGCGGGGAAAAGGTTTAATCTTTTTTGCCGCCGGTTCCGGCCGTGCGACGCTGAACTATAGTGAAGACGGCGAACGCCGTAGGGCCAGGGATTCCAATGTGCGCAGCCAGGAAACAGGACGACGATGGGCTTTTCGCCATCAGTGGC < 8:337755/148‑1 GAATCCCTGGCCCTACGGCGTTCGCCGTCTTCACTATAGTTCAGCGTCGCACGGCCGGAACCGGCGGCAAAAAAGATTAAACCTTTTCCCCGCCTTCACCCTCAACCGTACGCGACATTGAGGTCGCGCCACGGTTTAAAGGAGTGAAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3676995‑3676847 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtgaagGCGGGGAAAAGGTTTAATCTTTTTTGCCGCCGGTTCCGGCCGTGCGACGCTGAACTATAGTGAAGACGGCGAACGCCGTAGGGCCAGGGATTCCAATGTGCGCAGCCAGGAAACAGGACGACGATGGGCTTTTCGCCATCAGTGGC > NC_002947/3676903‑3677048 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |