New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 4541305 | 49 (0.830) | 4 (0.070) | 4/246 | NT | 7.8% | coding (22/1503 nt) | nhaB | Na(+)/H(+) antiporter NhaB |
? | NC_002947 | = 4541332 | 47 (0.830) | coding (49/1503 nt) | nhaB | Na(+)/H(+) antiporter NhaB |
AGGTTCATGACACCGATGGTAACCCAGCCCAATGGCCGTACATGTGCCAAAAACGGGACTGTGCGCCTTGCCTAAGACGCGTATATCCGGCACCGTGCGCCATCGCTGAATTATAAGGATACATATTTATGTCACGCCCCCTGACCGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4541156‑4541305 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggcgACTTGCCCAGAAAACCGTGGGCGAGGGCGCCGGTCAGGGGGCGTGACATAAATATGTATCCTTATAATTCAGCGATGGCGCACGGTGCCGGATATACGCGTCTTAGGCAAGGCGCACAGTCCCGTTTTTGGCACATGTACGGCCAT < NC_002947/4541332‑4541187 AGGTTCATGACACCGATGGTAACCCAGCCCAATGGCCGTACATGTGCCAAAAACGGGACTGTGCGCCTTGCCTAAGACGCGTATATCCGGCACCGTGCGCCATCGCTGAATTATAAGGATACATATTTATGTCACGCCCCCTGACCGGC < 6:360040/149‑1 CAATGGCCGTACATGTGCCAAAAACGGGACTGTGCGCCTTGCCTAAGACGCGTATATCCGGCACCGTGCGCCATCGCTGAATTATAAGGATACATATTTATGTCACGCCCCCTGACCGGCGACTTGCCCAGAAAACCGTGGGCGAGGGC > 5:96611/1‑149 GTACATGTGCCAAAAACGGGACTGTGCGCCTTGCCTAAGACGCGTATATCCGGCACCGTGCGCCATCGCTGAATTATAAGGATACATATTTATGTCACGCCCCCTGACCGGCGACTTGCCCAGAAAACCGTGGGCGAGGGCGCCGGTCA < 6:96611/149‑1 GTACATGTGCCAAAAACGGGACTGTGCGCCTTGCCTAAGACGCGTATATCCGGCACCGTGCGCCATCGCTGAATTATAAGGATACATATTTATGTCACGCCCCCTGACCGGCGACTTGCCCAGAAAACCGTGGGCGAGGGCGCCGG > 5:144650/1‑146 GTACATGTGCCAAAAACGGGACTGTGCGCCTTGCCTAAGACGCGTATATCCGGCACCGTGCGCCATCGCTGAATTATAAGGATACATATTTATGTCACGCCCCCTGACCGGCGACTTGCCCAGAAAACCGTGGGCGAGGGCGCCGG < 6:144650/146‑1 CGGCGACTTGCCCAGAAAACCGTGGGCGAGGGCGCCGGTCAGGGGGCGTGACATAAATATGTATCCTTATAATTCAGCGATGGCGCACGGTGCCGGATATACGCGTCTTAGGCAAGGCGCACAGTCCCGTTTTTGGCACATGTACGGC > 8:112591/1‑148 GCGACTTGCCCAGAAAACCGTGGGCGAGGGCGCCGGTCAGGGGGCGTGACATAAATATGTATCCTTATAATTCAGCGATGGCGCACGGTGCCGGATATACGCGTCTTAGGCAAGGCGCACAGTCCCGTTTTTGGCACATGTACGGCCAT < 1:100126/149‑1 AGGTTCATGACACCGATGGTAACCCAGCCCAATGGCCGTACATGTGCCAAAAACGGGACTGTGCGCCTTGCCTAAGACGCGTATATCCGGCACCGTGCGCCATCGCTGAATTATAAGGATACATATTTATGTCACGCCCCCTGACCGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4541156‑4541305 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggcgACTTGCCCAGAAAACCGTGGGCGAGGGCGCCGGTCAGGGGGCGTGACATAAATATGTATCCTTATAATTCAGCGATGGCGCACGGTGCCGGATATACGCGTCTTAGGCAAGGCGCACAGTCCCGTTTTTGGCACATGTACGGCCAT < NC_002947/4541332‑4541187 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |