New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 4541305	49 (0.830)	4 (0.070)	4/246	NT	7.8%	coding (22/1503 nt)	nhaB	Na(+)/H(+) antiporter NhaB
	?	NC_002947	= 4541332	47 (0.830)					coding (49/1503 nt)	nhaB	Na(+)/H(+) antiporter NhaB

GTTCATGACACCGATGGTAACCCAGCCCAATGGCCGTACATGTGCCAAAAACGGGACTGTGCGCCTTGCCTAAGACGCGTATATCCGGCACCGTGCGCCATCGCTGAATTATAAGGATACATATTTATGTCACGCCCCCTGACCGGCGCCCTCGCCCACG‑GT‑TTTCTGGGCAAGTCGCCGATTTGGTACAAGGTGGTCATCTGCCTGTTTTTGGTGCTCAACCCGCTGTTGTTGGTAACCATTGGCCCGGTTGCGACCGGCTGGGCACTGGTGCTCGAATTCATCTTCACCCTGGC  >  NC_002947/4541158‑4541453                                                                                                                                                    |                                                                                                                                                       gTTCATGACACCGATGGTAACCCAGCCCAATGGCCGTACATGTGCCAAAAACGGGACTGTGCGCCTTGCCTAAGACGCGTATATCCGGCACCGTGCGCCATCGCTGAATTATAAGGATACATATTTATGTCACGCCCCCTGACCGgcgc                                                                                                                                                       <  1:334434/149‑1 (MQ=255)          acCGATGGTAACCCAGCCCAATGGCCGTACATGTGCCAAAAACGGGACTGTGCGCCTTGCCTAAGACGCGTATATCCGGCACCGTGCGCCATCGCTGAATTATAAGGATACATATTTATGTCACGCCCCCTGACAGGCGCCCTCGCCCa                                                                                                                                              >  2:163164/1‑149 (MQ=255)                    aCCCAGCCCAATGGCCGTACATGTGCCAAAAACGGGACTGTGCGCCTTGCCTAAGACGCGTATATCCGGCACCGTGCGCCATCGCTGAATTATAAGGATACATATTTATGTCACGCCCCCTGACCGGCGCCCTCGCCCACG‑GT‑TTTCt                                                                                                                                   <  7:323336/148‑1 (MQ=255)                      ccAGCCCAATGGCCGTACATGTGCCAAAAACGGGACTGTGCGCCTTGCCTAAGACGCGTATATCCGGCACCGTGCGCCATCGCTGAATTATAAGGATACATATTTATGTCACGCCCCCTGACCGGCGCCCTCGCCCACG‑GT‑TTTCTggg                                                                                                                                <  2:242652/149‑1 (MQ=255)                        aGCCCAATGGCCGTACATGTGCCAAAAACGGGACTGTGCGCCTTGCCTAAGACGCGTATATCCGGCACCGTGCGCCATCGCTGAATTATAAGGATACATATTTATGTCACGCCCCCTGACCGGCGCCCTCGCCCACG‑GT‑TTTCTGGGc                                                                                                                               >  3:149458/1‑148 (MQ=255)                           ccAATGGCCGTACATGTGCCAAAAACGGGACTGTGCGCCTTGCCTAAGACGCGTATATCCGGCACCGTGCGCCATCGCTGAATTATAAGGATACATATTTATGTCACGCCCCCTGACCGGCGCCCTCGCCCACG‑GT‑TTTCt                                                                                                                                   >  8:44433/1‑141 (MQ=255)                           ccAATGGCCGTACATGTGCCAAAAACGGGACTGTGCGCCTTGCCTAAGACGCGTATATCCGGCACCGTGCGCCATCGCTGAATTATAAGGATACATATTTATGTCACGCCCCCTGACCGGCGCCCTCGCCCACG‑GT‑TTTCt                                                                                                                                   <  7:44433/141‑1 (MQ=255)                           ccAATGGCCGTACATGTGCCAAAAACGGGACTGTGCGCCTTGCCTAAGACGCGTATATCCGGCACCGTGCGCCATCGCTGAATTATAAGGATACATATTTATGTCACGCCCCCTGACCGGCGCCCTCGCCCACG‑GT‑TTTCTGGGCAAGt                                                                                                                           >  7:191998/1‑149 (MQ=255)                            cAATGGCCGTACATGTGCCAAAAACGGGACTGTGCGCCTTGCCTAAGACGCGTATATCCGGCACCGTGCGCCATCGCTGAATTATAAGGATACATATTTATGTCACGCCCCCTGACCGGCGacttgcccagaaaaccgtgggcgagggc                                                                                                                            >  5:96611‑M1/1‑121 (MQ=255)                              aTGGCCGTACATGTGCCAAAAACGGGACTGTGCGCCTTGCCTAAGACGCGTATATCCGGCACCGTGCGCCATCGCTGAATTATAAGGATACATATTTATGTCACGCCCCCTGACCGGCGCCCTCGCCCACG‑GT‑TTTCTGGGCaa                                                                                                                             <  2:35048/144‑1 (MQ=255)                              aTGGCCGTACATGTGCCAAAAACGGGACTGTGCGCCTTGCCTAAGACGCGTATATCCGGCACCGTGCGCCATCGCTGAATTATAAGGATACATATTTATGTCACGCCCCCTGACCGGCGCCCTCGCCCACG‑GT‑TTTCTGGGCAAGTcgc                                                                                                                        <  1:100126‑M2/149‑4 (MQ=255)                              aTGGCCGTACATGTGCCAAAAACGGGACTGAGCGCCTTGCCTAAGACGCGTATATCCGGCACCGTGCGCCATCGCTGAATTATAAGGATACATATTTATGTCACGCCCCCTGACCGGCGCCCTCGCCCACG‑GT‑TTTCTGGGCaa                                                                                                                             >  1:35048/1‑144 (MQ=255)                                 gCCGTACATGTGCCAAAAACGGGACTGTGCGCCTTGCCTAAGACGCGTATATCCGGCACCGTGCGCCATCGCTGAATTATAAGGATACATATTTATGTCACGCCCCCTGACCGGCGCCCTCGCCCACG‑GT‑TTTCTGGGCAAGTcgccg                                                                                                                      >  8:112591‑M2/1‑143 (MQ=255)                                    gTACATGTGCCAAAAACGGGACTGTGCGCCTTGCCTAAGACGCGTATATCCGGCACCGTGCGCCATCGCTGAATTATAAGGATACATATTTATGTCACGCCCCCTGACCGGCGacttgcccagaaaaccgtgggcgagggcgccggtca                                                                                                                    <  6:96611‑M1/149‑37 (MQ=255)                                    gTACATGTGCCAAAAACGGGACTGTGCGCCTTGCCTAAGACGCGTATATCCGGCACCGTGCGCCATCGCTGAATTATAAGGATACATATTTATGTCACGCCCCCTGACCGGCGacttgcccagaaaaccgtgggcgagggcgccgg                                                                                                                       <  6:144650‑M1/146‑34 (MQ=255)                                    gTACATGTGCCAAAAACGGGACTGTGCGCCTTGCCTAAGACGCGTATATCCGGCACCGTGCGCCATCGCTGAATTATAAGGATACATATTTATGTCACGCCCCCTGACCGGCGacttgcccagaaaaccgtgggcgagggcgccgg                                                                                                                       >  5:144650‑M1/1‑113 (MQ=255)                                     tACATGTGCCAAAAACGGGACTGTGCGCCTTGCCTAAGACGCGTATATCCGGCACCGTGCGCCATCGCTGAATTATAAGGATACATATTTATGTCACGCCCCCTGACCGGCGCCCTCGCCCACG‑GT‑TTTCTGGGCAAGTCGCCGATTTg                                                                                                                 <  6:1603/149‑1 (MQ=255)                                          gtgCCAAAAACGGGACTGTGCGCCTTGCCTAAGACGCGTATATCCGGCACCGTGCGCCATCGCTGAATTATAAGGATACATATTTATGTCACGCCCCCTGACCGGCGCCCTCGCCCACG‑GT‑TTTCTGGGCAAGTCGCCGATTTGGTAc                                                                                                             >  7:207487/1‑148 (MQ=255)                                                      ggACTGTGCGCCTTGCCTAAGACGCGTATATCCGGCACCGTGCGCCATCGCTGAATTATAAGGATACATATTTATGTCACGCCCCCTGACCGGCGCCCTCGCCCACG‑GT‑TTTCTGGGCAAGTCGCCGATTTGGTACAAGGTGGTCATCt                                                                                                <  2:100126/149‑1 (MQ=255)                                                       gACTGTGCGCCTTGCCTAAGACGCGTATATCCGGCACCGTGCGCCATCGCTGAATTATAAGGATACATATTTATGTCACGCCCCCTGACCGGCGCCCTCGCCCACGAGTGTTTGTGCGCAAGTCGCCGATTTTGAACAAGGTGGTCATc                                                                                                 >  1:126154/1‑149 (MQ=255)                                                                 cTTGCCTAAGACGCGTATATCCGGCACCGTGCGCCATCGCTGAATTATAAGGATACATATTTATGTCACGCCCCCTGACCGGCGCCCTCGCCCACG‑GT‑TTTCTGGGCAAGTCGCCGATTTGGTACAAGGTGGTCATCTGCCTGTTTTTg                                                                                     <  2:43625/149‑1 (MQ=255)                                                                    gCCTAAGACGCGTATATCCGGCACCGTGCGCCATCGCTGAATTATAAGGATACATATTTATGTCACGCCCCCTGACCGGCGCCCTCGCCCACG‑GT‑TTTCTGGGCAAGTCGCCGATTTGGTACAAGGTGGTCATCTGCCTGTTTTTGGt                                                                                   <  4:149458/148‑1 (MQ=255)                                                                     ccTAAGACGCGTATATCCGGCACCGTGCTCCATCGCTGAATTATAAGGATACATATTTATGTCACGCCCCCTGACCGGCGCCCTCGCCCACG‑GT‑TATCTGGGCAAGTCGCCGATTTGGTACAAGGTGGTCATCTGCCTGTTTTTGGTGc                                                                                 <  8:183824/149‑1 (MQ=255)                                                                     ccTAAGACGCGTATATCCGGCACCGTGCGCCATCGCTGAATTATAAGGATACATATTTATGTCACGCCCCCTGACCGGCGCCCTCGCCCACG‑GT‑TTTCTGGGCAAGTCGCCGATTTGGTACAAGGTGGTCATCTGCCTGTTTTTGGTGc                                                                                 <  5:64889/149‑1 (MQ=255)                                                                       tAAGACGCGTATATCCGGCACCGTGCGCCATCGCTGAATTATAAGGATACATATTTATGTCACGACCCCTGACCGGCGCCCTCGCCCACG‑GT‑TTTCTGGGCAAGTCGCCGATTTGGTACAAGGTGGTCATCTGCCTGTTTTTGGTGCt                                                                                >  6:298829/1‑148 (MQ=255)                                                                          gACGCGTATATCCGGCACCGTGCGCCATCGCTGAATTATAAGGATACATATTTATGTCACGCCCCCTGACCGGCGCCCTCGCCCACG‑GT‑TTTCTGGGCAAGTCGCCGATTTGGTACAAGGTGGTCATCTGCCTGTTTTTGGTGCTCAAc                                                                            <  1:16600/149‑1 (MQ=255)                                                                           aCGCGTATATCCGGCACCGTGCGCCATCGCTGAATTATAAGGATACATATTTATGTCACGCCCCCTGACCGGCGCCCTCGCCCACG‑GT‑TTTCTGGGCAAGTCGCAGATTTGGTACAAGGTGGTCATCTGCCTGTTTTTGGTCCTCAAcc                                                                           >  5:168150/1‑149 (MQ=255)                                                                                  tatCCGGCACCGTGCGCCATCGCTGAATTATAAGGATACATATTTATGTCACGCCCCCTGACCGGCGCCCTCGCCCACG‑GT‑TTTCTGGGCAAGTCGCCGATTTGGTACAAGGTGGTCATCTGCCTGTTTTTGGTGCTCAACCCGCtgtt                                                                    >  4:111816/1‑149 (MQ=255)                                                                                    tCCGGCACCGTGCGCCATCGCTGAATTATAAGGATACATATTTATGTCACGCCCCCTGACCGGCGCCCTCGCCCACG‑GT‑TTTCTGGGCAAGTCGCCGATTTGGTACAAGGTGGTCATCTGCCTGTTTTTGGTGCTCAACCCGCtgttgt                                                                  >  7:256737/1‑149 (MQ=255)                                                                                      cGGCACCGTGCGCCATCGCTGAATTATAAGGATACATATTTATGTCACGCCCCCTGACCGGCGCCCTCGCCCACG‑GT‑TTTCTGGGCAAGTCGCCGATTTGGTACAAGGTGGTCATCTGCCTGTTTTTGGTGCTCAACCCGCTGttgttg                                                                <  8:207487/149‑1 (MQ=255)                                                                                                 gcCATCGCTGAATTATAAGGATACATATTTATGTCACGCCCCCTGACCGGCGCCCTCGCCCACG‑GT‑TTTCTGGGCAAGTCGCCGATTTGGTACAAGGTGGTCATCTGCCTGTTTTTGGTGCTCAACCCGCTGTTGTTGGTAACCATTgg                                                     >  1:90362/1‑149 (MQ=255)                                                                                                 gcCATCGCTGAATTATAAGGATACATATTTATGTCACGCCCCCTGACCGGCGCCCTCGCCCACG‑GT‑TTTCTGGGCAAGTCGCCGATTTGGTACAAGGTGGTCATCTGCCTGTTTTTGGTGCTCAACCCGCTGTTGTTGGTAACCATTgg                                                     >  4:335389/1‑149 (MQ=255)                                                                                                  ccATCGCTGAATTATAAGGATACATATTTATGTCACGCCCCCTGACCGGCGCCCTCGCCCACG‑GT‑TTTCTGGGCAAGTCGCCGATTTGGTACAAggtgg                                                                                                      >  8:123428/1‑99 (MQ=255)                                                                                                  ccATCGCTGAATTATAAGGATACATATTTATGTCACGCCCCCTGACCGGCGCCCTCGCCCACG‑GT‑TTTCTGGGCAAGTCGCCGATTTGGTACAAggtgg                                                                                                      <  7:123428/99‑1 (MQ=255)                                                                                                           aaTTATAAGGATACATATTTATGTCACGCCCCCTGACCGGCGCCCTCGCCCACG‑GT‑TTTCTGGGCAAGTCGCCGATTTGGTACAAGGTGGTCATCTGCCTGTTTTTGGTGCTCAACCCGCTGTTGTTGGTAACCATTGGCCCGGTCGc                                            <  2:90362/148‑1 (MQ=255)                                                                                                            aTTATAAGGATACATATTTATGTCACGCCCCCTGACCGGCGCCCTCGCCCACG‑GT‑TTTCTGGGCAAGTCGCCGATTTGGTACAAGGTGGTCATCTGCCTGTTTTTGGTGCTCAACCCGCTGTTGTTGGTAACCATTGGCCCGGTTGCg                                           <  3:111816/148‑1 (MQ=255)                                                                                                              tataAGGATACATATTTATGTCACGCCCCCTGACCGGCGCCCTCGCCCACG‑GT‑TTTCTGGGCAAGTCGCCGATTTGGTACAAGGTGGTCATCTGCCTGTTTTTGGTGCTCAACCCGCTGTTGTTGGTAACCATTGGCCCGGTTGCGAcc                                        >  3:53855/1‑149 (MQ=255)                                                                                                               ataAGGATACATATTTATGTCACGCCCACTGACCGGCGCCCTCGCCCACG‑GT‑TTTCTGGGCAAGTCGCCGATTTGGTACAAGGTGGTCATCTGCCTGTTTTTGGTGCTCAACCCGCTGTTGTTGGTAACCATTGGCCCGGTTGCGACCg                                       >  1:210645/1‑149 (MQ=255)                                                                                                                   ggATACATATTTATGTCACGCCCCCTGACCGGCGCCCTCGCCCACG‑GT‑TTTCTGGGCAAGTCGCCGATTTGGTACAAGGTGGTCATCTGCCTGTTTTTGGTGCTCAACCCGCTGTTGTTGGTAACCATTGGCCCGGTTGCGACCGGCTg                                   >  4:134657/1‑149 (MQ=255)                                                                                                                     aTACATATTTATGTCACGCCCCCTGACCGGCGCCCTCGCCCACG‑GT‑TTTCTGGGCAAGTCGCCGATTTGGTACAAGGTGGTCATCTGCCTGTTTTTGGTGCTCAACCCGCTGTTGTTGGTAACCATTGGCCCGGTTGCGACCGGCTggg                                 <  2:126154/149‑1 (MQ=255)                                                                                                                     aTACATATTTATGTCACGCCCCCTGACCGGCGCCCTCGCCCACG‑GT‑TTTCTGGGCAAGTCGCCGATTTGGTACAAGGTGGTCATCTGCCTGTTTTTGGTGCTCAACCCGCTGTTGTTGGTAACCATTGGCCCGGTTGCGACCGGCTggg                                 <  3:335389/149‑1 (MQ=255)                                                                                                                       aCATATTTATGTCACGCCCCCTGACCGGCGCCCTCGCCCACG‑GT‑TTTCTGGGCAAGTCGCCGATTTGGTACAAGGTGGTCATCTGCCTGTTTTTGGTGCTCAACCCGCTGTTGTTGGTAACCATTGGCCCGGTTGCGACCGGCTGGGCa                               >  6:107492/1‑149 (MQ=255)                                                                                                                       aCATATTTATGTCACGCCCCCTGACCGGCGCCCTCGCCCACG‑GT‑TTTCTGGGCAAGTCGCCGATTTGGTACAAGGTGGTCATCTGCCTGTTTTTGGTGCTCAACCCGCTGTTGTTGGTAACCATTGGCCCGGTTGCGACCGGCTGGGCa                               >  1:255433/1‑149 (MQ=255)                                                                                                                        cATATTTATGTCACGCCCCCTGACCGGCGCCCTCGCCCACG‑GT‑TTTCTGGGCAAGTCGCCGATTTGGTACAAGGTGGTCATCTGCCTGTTTTTGGTGCTCAACCCGCTGTTGTTGGTAACCATTGGCCCGGTTGCGACCGGCTGGGCAc                              <  5:298829/149‑1 (MQ=255)                                                                                                                         atatTTATGTCACGCCCCCTGACCGGCGCCCTCGCCCACG‑GT‑TTTCTGGGCAAGTCGCCGATTTGGTACAAGGTGGTCATCTGCCTGTTTTTGGTGCTCAACCCGCtg                                                                      <  4:290135/108‑1 (MQ=255)                                                                                                                         atatTTATGTCACGCCCCCTGACCGGCGCCCTCGCCCACG‑GT‑TTTCTGGGCAAGTCGCCGATTTGGTACAAGGTGGTCATCTGCCTGTTTTTGGTGCTCAACCCGCtg                                                                      >  3:290135/1‑108 (MQ=255)                                                                                                                         atatTTATGTCACGCCCCCTGACCGGCGCCCTCGCCCACG‑GT‑TTTCTGGGCAAGTCGCCGATTTGGTACAAGGTGGTCATCTGCCTGTTTTTGGTGCTCAACCCGCTGTTGTTGGTAACCATTGGCCCGGTTGCGACCGGCTGGGCACt                             <  2:210645/149‑1 (MQ=255)                                                                                                                         atatTTATGTCACGCCCCCTGACCGGCGCCCTCGCCCACG‑GT‑TTTCTGGGCAAGTCGCCGATTTGGTACAAGGTGGTCATCTGCCTGTTTTTGGTGCTCAACCCGCTGTTGTTGGTAACCATTGGCCCGGTTGCGACCGGCTGGGCACt                             >  4:43145/1‑149 (MQ=255)                                                                                                                           atTTATGTCACGCCCCCTGACCGGCGCCCTCGCCCACG‑GT‑TTTCTGGGCAAGTCGCCGATTTGGTACAAGGTGGTCATCTGCCTGTTTTTGGTGCTCAACCCGCTGTTGTTGGTAACCATTGGCCCGGTTGCGACCGGCTGGGCACTgg                           >  7:251187/1‑149 (MQ=255)                                                                                                                               aTGTCACGCCCCCTGACCGGCGCCCTCGCCCACG‑GT‑TTTCTGGGCAAGTCGCCGATTTGGTACAAGGTGGTCATCTGCCTGTTTTTGGTGCTCAACCCGCTGTTGTTGTTAACCATTGGCCCGGTTGCGACCGGCTGGGCACTGGTGc                        <  6:168150/148‑1 (MQ=255)                                                                                                                                  tCACGCCCCCTGACCGGCGCCCTCGCCCACG‑GT‑TTTCTGGGCAAGTCGCCGATTTGGTACAAGGTGGTCATCTGCCTGTTTTTGGTGCTCAACCCGCTGTTGTTGGTAACCATTGGCCCGGTTGCGACCGGCTGGGCACTGGTGCtag                     >  8:216723/1‑146 (MQ=255)                                                                                                                                  tCACGCCCCCTGACCGGCGCCCTCGCCCACG‑GT‑TTTCTGGGCAAGTCGCCGATTTGGTACAAGGTGGTCATCTGCCTGTTTTTGGTGCTCAACCCGCTGTTGTTGGTAACCATTGGCCCGGTTGCGACCGGCTGGGCACTGGTGCTCg                     <  1:163164/148‑1 (MQ=255)                                                                                                                                    aCGCCCCCTGACCGGCGCCCTCGCCCACG‑GT‑TTTCTGGGCAAGTCGCCGATTTGGTACAAGGTGGTCATCTGCCTGTTTTTGGTGCTCAACCCGCTGTTGTTGGTAACCa                                                         <  2:59089/110‑1 (MQ=255)                                                                                                                                    aCGCCCCCTGACCGGCGCCCTCGCCCACG‑GT‑TTTCTGGGCAAGTCGCCGATTTGGTACAAGGTGGTCATCTGCCTGTTTTTGGTGCTCAACCCGCTGTTGTTGGTAACCa                                                         >  1:59089/1‑110 (MQ=255)                                                                                                                                         cccTGACCGGCGCCCTCGCCCACG‑GT‑TTTCTGGGCAAGTCGCCGATTTGGTACAAGGTGGTCATCTGCCTGTTTTTGGTGCTCAACCCGCTGTTGTTGGTAACCATTGGCCCGGTTGCGACCGGCTGGGCACTGGTGCTCGAATTCATc             <  8:256737/149‑1 (MQ=255)                                                                                                                                            tGACCGGCGCCCTCGCCCACG‑GT‑TTTCTGGGCAAGTcgccggtcagggggcgtgacataaatatgtatccttataattcagcgatggcgcacggtgccggatatacgcgtcttaggcaaggcgcacagtcccgtttttggcacatgtac          <  6:96611‑M2/149‑114 (MQ=255)                                                                                                                                              aCCGGCGCCCTCGCCCACG‑GT‑TTTCTGGGCAAGTCGCCGATTTGGTACAAGGTGGTCATCTGCCTGTTTTTGGTGCTCAACCCGCTGTTGTTGGTAACCATTGGCCCGGTTGCGACCGGCTGGGCACTGGTGCTCGAATTCATCTTCAc        <  8:191998/149‑1 (MQ=255)                                                                                                                                               ccGGCGCCCTCGCCCACG‑GT‑TTTCTGGGCAAGTcgccggtcagggggcgtgacataaatatgtatccttataattcagcgatggcgcacggtgccggatatacgcgtcttaggcaaggcgcacagtcccgtttttggcacatgtac          <  6:144650‑M2/146‑114 (MQ=255)                                                                                                                                               ccGGCGCCCTCGCCCACG‑GT‑TTTCTGGGCAAGTcgccggtcagggggcgtgacataaatatgtatccttataattcagcgatggcgcacggtgccggatatacgcgtcttaggcaaggcgcacagtcccgtttttggcacatgtac          >  5:144650‑M2/1‑33 (MQ=255)                                                                                                                                                cGGCGacttgcccagaaaaccgtgggcgagggcgccggtcagggggcgtgacataaatatgtatccttataattcagcgatggcgcacggtgccggatatacgcgtcttaggcaaggcgcacagtcccgtttttggcacatgtacggc         >  8:112591‑M1/1‑5 (MQ=255)                                                                                                                                                  gCGacttgcccagaaaaccgtgggcgagggcgccggtcagggggcgtgacataaatatgtatccttataattcagcgatggcgcacggtgccggatatacgcgtcttaggcaaggcgcacagtcccgtttttggcacatgtacggccat      <  1:100126‑M1/149‑147 (MQ=255)                                                                                                                                                    gcCCTCGCCCACG‑GT‑TTTCTGGGCAAGTcgccggtcagggggcgtgacataaatatgtatccttataattcagcgatggcgcacggtgccggatatacgcgtcttaggcaaggcgcacagtcccgtttttggcacatgtacggccattg  >  5:96611‑M2/1‑28 (MQ=255)                                                                                                                                                    |                                                                                                                                                       GTTCATGACACCGATGGTAACCCAGCCCAATGGCCGTACATGTGCCAAAAACGGGACTGTGCGCCTTGCCTAAGACGCGTATATCCGGCACCGTGCGCCATCGCTGAATTATAAGGATACATATTTATGTCACGCCCCCTGACCGGCGCCCTCGCCCACG‑GT‑TTTCTGGGCAAGTCGCCGATTTGGTACAAGGTGGTCATCTGCCTGTTTTTGGTGCTCAACCCGCTGTTGTTGGTAACCATTGGCCCGGTTGCGACCGGCTGGGCACTGGTGCTCGAATTCATCTTCACCCTGGC  >  NC_002947/4541158‑4541453

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.