New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 4798741	15 (0.250)	5 (0.090)	5/238	NT	23.8%	intergenic (‑79/‑162)	qseB/PP_4226	two‑component system DNA‑binding transcriptional activator QseB/hypothetical protein
	?	NC_002947	= 4798772	18 (0.330)					intergenic (‑110/‑131)	qseB/PP_4226	two‑component system DNA‑binding transcriptional activator QseB/hypothetical protein

AGCCCTGGGCGGTGAGACCGGCGCAGATGCCGGCGGCGATCAGGTCGTCGTCCTCGCAGAGCAGAACGTGCATGGTGGGGCTCCCGGTGTGGTGTGGCTGTTATTGCACCTTGGGCGGATTAAGGGGGGATTATGGACCTTTTGGGCAGGGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/4798590‑4798741 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggcagggtGGCGTCCCGCGCGGCGCTCGATCTCCCCCCAACCCTGCC  <  NC_002947/4798772‑4798734                                                                                                                                                                                                 AGCCCTGGGCGGTGAGACCGGCGCAGATGCCGGCGGCGATCAGGTCGTCGTCCTCGCAGAGCAGAACGTGCATGGTGGGGCTCCCGGTGTGGTGTGGCTGTTATTGCACCTTGGGCGGATTAAGGGGGGATTATGGACCTTTTGGGCAG                                            <  4:234624/149‑1                              CCGGCGGCGATCAGGTCGTCGTCCTCGCAGAGCAGAACGTGCATGGTGGGGCTCCCGGTGTGGTGTGGCTGTTATTGCACCTTGGGCGGATTAAGGGGGGATTATGGACCTTTTG                                                 <  1:11551/115‑1                              CCGGCGGCGATCAGGTCGTCGTCCTCGCAGAGCAGAACGTGCATGGTGGGGCTCCCGGTGTGGTGTGGCTGTTATTGCACCTTGGGCGGATTAAGGGGGGATTATGGACCTTTTG                                                 >  2:11551/1‑115                                 GCGGCGATCAGGTCGTCGTCCTCGCAGAGCAGAACGTGCATGGTGGGGCTCCCGGTGTGGTGTGGCTGTTATTGCACCTTGGGCGGATTAAGGGGGGATTATGGACCTTTTGGG                                               >  7:302309/1‑114                                 GCGGCGATCAGGTCGTCGTCCTCGCAGAGCAGAACGTGCATGGTGGGGCTCCCGGTGTGGTGTGGCTGTTATTGCACCTTGGGCGGATTAAGGGGGGATTATGGACCTTTTGGG                                               <  8:302309/114‑1                                      GATCAGGTCGTCGTCCTCGCAGAGCAGAACGTGCATGGTGGGGCTCCCGGTGTGGTGTGGCTGTTATTGCACCTTGGGCGGATTAAGGGGGGATTATGGACCTTTTGGGCAGGGTGGCGTCCCGCGCGGCGCTCGATCTCCCCCCAACC       <  5:80828/149‑1                                            GTCGTCGTCCTCGCAGAGCAGAACGTGCATGGTGGGGCTCCCGGTGTGGTGTGGCTGTTATTGCACCTTGGGCGGATTAAGGGGGGATTATGGACCTTTTGGGCAGGGTGGCGTCCCGCGCGGCGCTCGATCTCCCCCCAACCCTG    >  3:297998/1‑146                                            GTCGTCGTCCTCGCAGAGCAGAACGTGCATGGTGGGGCTCCCGGTGTGGTGTGGCTGTTATTGCACCTTGGGCGGATTAAGGGGGGATTATGGACCTTTTGGGCAGGGTGGCGTCCCGCGCGGCGCTCGATCTCCCCCCAACCCTG    <  4:297998/146‑1                                                      TCGCAGAGCAGAACGTGCATGGTGGGGCTCCCGGTGTGGTGTGGCTGTTATTGCACCTTGGGCGGATTAAGGGGGGATTATGGACCTTTTGGGCAGGGTGGCGTCCCGCGCGGCGCTCGATCTCCCCCCAACCCTGCC  >  1:27816/1‑138                                                      TCGCAGAGCAGAACGTGCATGGTGGGGCTCCCGGTGTGGTGTGGCTGTTATTGCACCTTGGGCGGATTAAGGGGGGATTATGGACCTTTTGGGCAGGGTGGCGTCCCGCGCGGCGCTCGATCTCCCCCCAACCCTGCC  <  2:27816/138‑1                                                                                                                                                                                                 AGCCCTGGGCGGTGAGACCGGCGCAGATGCCGGCGGCGATCAGGTCGTCGTCCTCGCAGAGCAGAACGTGCATGGTGGGGCTCCCGGTGTGGTGTGGCTGTTATTGCACCTTGGGCGGATTAAGGGGGGATTATGGACCTTTTGGGCAGGGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/4798590‑4798741 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggcagggtGGCGTCCCGCGCGGCGCTCGATCTCCCCCCAACCCTGCC  <  NC_002947/4798772‑4798734

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.