New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 4963231 = | 53 (0.900) | 3 (0.050) | 3/244 | NT | 5.6% | coding (424/1218 nt) | fleS | two‑component system sensor histidine kinase FleS |
? | NC_002947 | 4963267 = | 50 (0.890) | coding (388/1218 nt) | fleS | two‑component system sensor histidine kinase FleS |
TCGTGATCGATGGTCAGGGCCTGGTGCGCGAAGCCAACCCGGCCGCCTGCGAGTTGCTCGGTGAGCCTCTGATCGGCCAATTGTGGCGCCAGGTGATCGCCCGTAGCTTTGCCCCGCGCAAGGACGACGGCCACGAAGTCTCGCTGCGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4963380‑4963231 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgcgcgGGGCAAAGCTACGGGCGATCACCTGGCGCCACAATTGGCCGATCAGAGGCTCACCGAGCAACTCGCAGGCGGCCGGGTTGGCTTCGCGCACCAGGCCCTGACCATCGATCACGATCACCCCGCCAGGCAGCAAGTCCAGCAGGTTC > NC_002947/4963267‑4963412 TCGTGATCGATGGTCAGGGCCTGGTGCGCGAAGCCAACCCGGCCGCCTGCGAGTTGCTCGGTGAGCCTCTGATCGGCCAATTGTGGCGCCAGGTGATCGCCCGTAGCTTTGCCCCGCGCAAGGACGACGGCCACGAAGTCTCGCTGCGC < 7:50229/149‑1 CGTGATCGATGGTCAGGGCCTGGTGCGCGAAGCCAACCCGGCCGCCTGCGAGTTGCTCGGTGAGCCTCTGATCGGCCAATTGTGGCGCCAGGTGATCGCCCGTAGCTTTGCCCCGCGCAAGGACGACGGCCACGAAGTCTCGCTGCGC < 6:240643/148‑1 TTTGCCCCGCGCAAGGACGACGGCCACGAAGTCTCGCTGCGCGGGGCAAAGCTACGGGCGATCACCTGGCGCCACAATTGGCCGATCAGAGGCTCACCGAGCAACTCGCAGGCGGCCGGG > 3:323150/1‑120 TTTGCCCCGCGCAAGGACGACGGCCACGAAGTCTCGCTGCGCGGGGCAAAGCTACGGGCGATCACCTGGCGCCACAATTGGCCGATCAGAGGCTCACCGAGCAACTCGCAGGCGGCCGGG < 4:323150/120‑1 CCCGCGCAAGGACGACGGCCACGAAGTCTCGCTGCGCGGGGCAAAGCTACGGGCGATCACCTGGCGCCACAATTGGCCGATCAGAGGCTCACCGAGCAACTCGCAGGCGGCCGGGTTGGCTTCGCGCACCAGGCCCTGACCATCGATCA > 3:334455/1‑149 GCGGGGCAAAGCTACGGGCGATCACCTGGCGCCACAATTGGCCGATCAGAGGCTCACCGAGCAACTCGCAGGCGGCCGGGTTGGCTTCGCGCACCAGGCCCTGACCATCGCGCACGATCACCCCGCCAGGCAGCAAGTCAAGCAGGTTC > 2:58011/1‑149 GCGGGGCAAAGCTACGGGCGATCACCTGGCGCCACAATTGGCCGATCAGAGGCTCACCGAGCAACTCGCAGGCGGCCGGGTTGGCTTCGCGCACCAGGCCCTGACCATCGATCACGATCACCCCGCCAGGCAGCAAGTCCAGCAGGTTC < 5:240643/149‑1 TCGTGATCGATGGTCAGGGCCTGGTGCGCGAAGCCAACCCGGCCGCCTGCGAGTTGCTCGGTGAGCCTCTGATCGGCCAATTGTGGCGCCAGGTGATCGCCCGTAGCTTTGCCCCGCGCAAGGACGACGGCCACGAAGTCTCGCTGCGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4963380‑4963231 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgcgcgGGGCAAAGCTACGGGCGATCACCTGGCGCCACAATTGGCCGATCAGAGGCTCACCGAGCAACTCGCAGGCGGCCGGGTTGGCTTCGCGCACCAGGCCCTGACCATCGATCACGATCACCCCGCCAGGCAGCAAGTCCAGCAGGTTC > NC_002947/4963267‑4963412 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |