New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	4963231 =	53 (0.900)	3 (0.050)	3/244	NT	5.6%	coding (424/1218 nt)	fleS	two‑component system sensor histidine kinase FleS
	?	NC_002947	4963267 =	50 (0.890)					coding (388/1218 nt)	fleS	two‑component system sensor histidine kinase FleS

TGGCGAGCCAGCTGGTCCTGGAGGCGACGGGTTTCAGTCAGGTCGTTGAGCAGCACCAATTGGCCAGGCTCGGCATCCAGTGAGCGGGTGGCGATCGACAGGCGGCGACCGTCGCGCAGCGAGACTTCG‑TGGCCGTCGTCCTTGCGCGGGGCAAAGCTACGGGCGATCACCTGGCGCCACAATTGGCCGATCAGAGGCTCACCGAGCAACTCGCAGGCGGCCGGGTTGGCTTCG‑CGCACCAGGCCCTGACCATCGATCACGATCACCCCGCCAGGCAGCAAGTCCAGCAGGTTC  >  NC_002947/4963119‑4963412                                                                                                                                                      |                                                                                                                                                   tGGCGAGCCAGCTGGTCCTGGAGGCGACGGGTTTCAGTCAGGTCGTTGAGCAGCACCAATTGGCCAGGCTCGGCATCCAGTGAGCGGGTGGCGATCGACAGGCGGCGACCGTCGCGCAGCGAGACTTCG‑TGGCCGTCGTCCTTGCGCgg                                                                                                                                                    <  2:157074/149‑1 (MQ=255)  tgatcgatggtcagggcctggtgcgcgaagccaacccggccgcctgcgagttgctcggtgagcctctgatcggccaattgtggcgccaggtgatcgcccgtagctttgcccCGCGCAGCGAGACTTCG‑TGGCCGTCGTCCTTGCGCggg                                                                                                                                                   >  3:334455‑M1/112‑149 (MQ=255)   gCGAGCCAGCTGGTCCTGGAGGCGACGGGTTTCAGTCAGGTCGTTGAGCAGCACCAATTGGCCAGGCTCGGCATCCAGTGAGCGGGTGGCGATCGACAGGCGGCGACCGTCGCGCAGCGAGACTTCG‑TGGCCGTCGTCCTTGCGCggg                                                                                                                                                   <  7:93017/148‑1 (MQ=255)       gCCAGCTGGTCCTGGAGGCGACGGGTTTCAGTCAGGTCGTTGAGCAGCACCAATTGGCCAGGCTCGGCATCCAGTGAGCGGGTGGCGATCGACAGGCGGCGACCGTCGCGCAGCGAGACTTCG‑TGGCCGTCGTCCTTGCGCGGGGCaaa                                                                                                                                              <  2:304544/149‑1 (MQ=255)             tGGTCCTGGAGGCGACGGGTTTCAGTCAGGTCGTTGAGCAGCACCAATTGGCCAGGCTCGGCATCCAGTGAGCGGGTGGCGATCGACAGGCGGCGACCGTCGCGCAGCGAGACTTCG‑TGGCCGTCGTCCTTGCGCGGGGCAAAGCTACg                                                                                                                                        <  4:118759/149‑1 (MQ=255)                        gCGACGGGTTTCAGTCAGGTCGTTGAGCAGCACCAATTGGCCAGGCTCGGCATCCAGTGAGCGGGTGGCGATCGACAGGCGGCGACCGTCGCGCAGCGAGACTTCG‑TGGCCGTCGTCCTTGCGCGGGGCAAAGCTACGGGCGATCACCt                                                                                                                             >  2:280177/1‑149 (MQ=255)                          gACGGGTTTCAGTCAGGTCGTTGAGCAGCACCAATTGGCCAGGCTCGGCATCCAGTGAGCGGGTGGCGATCGACAGGCGGCGACCGTCGCGCAGCGAGACTTCG‑TGGCCGTCGTCCTTGCGCGGGGCAAAGCTACGGGCGATCACCTgg                                                                                                                           >  3:196868/1‑149 (MQ=255)                               gTTTCAGTCAGGTCGTTGAGCAGCACCAATTGGCCAGGCTCGGCATCCAGTGAGCGGGTGGCGATCGACAGGCGGCGACCGTCGCGCAGCGAGACTTCGCTGGCCGTCGTCCTTGCGCGGGGCAAAGCTACGGGCGATCACCTGGCGcc                                                                                                                       <  1:280177/149‑1 (MQ=255)                               gTTTCAGTCAGGTCGTTGAGCAGCACCAATTGGCCAGGCTCGGCATCCAGTGAGCGGGTGGCGATCGACAGGCGGCGACCGTCGCGCAGCGAGACTTCG‑TGGCCGTCGTCCTTGCGCGGGGCAAAGCTACGGGCGATCACCTGGCGCca                                                                                                                      >  3:198409/1‑149 (MQ=255)                                tttCAGTCAGGTCGTTGAGCAGCACCAATTGGCCAGGCTCGGCATCCAGTGAGCGGGTGGCGATCGACAGGCGGCGACCGTCGCGCAGCGAGACTTCG‑TGGCCGTCGTCCTTGCGCGGGGCAAAGCTACGGGCGATCACCTGGCGCca                                                                                                                      >  7:152769/1‑148 (MQ=255)                                    cccggccgcctgcgagttgctcggtgagcctctgatcggccaattgtggcgccaggtgatcgcccgtagctttgcccCGCGCAGCGAGACTTCG‑TGGCCGTCGTCCTTGCGCGGGGCaaa                                                                                                                                              >  3:323150‑M1/78‑120 (MQ=255)                                    cccggccgcctgcgagttgctcggtgagcctctgatcggccaattgtggcgccaggtgatcgcccgtagctttgcccCGCGCAGCGAGACTTCG‑TGGCCGTCGTCCTTGCGCGGGGCaaa                                                                                                                                              <  4:323150‑M1/43‑1 (MQ=255)                                        agGTCGTTGAGCAGCACCAATTGGCCAGGCTCGGCATCCAGTGAGCGGGTGGCGATCGACAGGCGGCGACCGTCGCGCAGCGAGACTTGG‑TGGCCGTCGTCCTTGCGCGGGGCAAAGCTACGGGCGATCACCTGGCGCCACAATTGGcc                                                                                                             >  8:318009/1‑149 (MQ=255)                                          gTCGTTGAGCAGCACCAATTGGCCAGGCTCGGCATCCAGTGAGCGGGTGGCGATCGACAGGCGGCGACCGTCGCGCAGCGAGACTTCG‑TGGCCGTCGTCCTTGCGCGGGGCAAAGCTACGGGCGATCACCTGGCGCCACAATTGGCCGa                                                                                                           >  2:324560/1‑149 (MQ=255)                                            cGTTGAGCAGCACCAATTGGCCAGGCTCGGCATCCAGTGAGCGGGTGGCGATCGACAGGCGGCGACCGTCGCGCAGCGAGACTTCG‑TGGCCGTCGTCCTTGCGCGGGGCAAAGCTACGGGCGATCACCTGGCGCCACAATTGGCCGAt                                                                                                          >  1:179298/1‑148 (MQ=255)                                             gTTGAGCAGCACCAATTGGCCAGGCTCGGCATCCAGTGAGCGGGTGGCGATCGACAGGCGGCGACCGTCGCGCAGCGAGACTTCG‑TGGCCGTCGTCCTTGCGCGGGGCAAAGCTACGGGCGATCACCTGGCGCCACAATTGGCCGAt                                                                                                          >  4:332860/1‑147 (MQ=255)                                             gTTGAGCAGCACCAATTGGCCAGGCTCGGCATCCAGTGAGCGGGTGGCGATCGACAGGCGGCGACCGTCGCGCAGCGAGACTTCG‑TGGCCGTCGTCCTTGCGCGGGGCAAAGCTACGGGCGATCACCTGGCGCCACAATTGGCCGAt                                                                                                          >  6:55668/1‑147 (MQ=255)                                             gTTGAGCAGCACCAATTGGCCAGGCTCGGCATCCAGTGAGCGGGTGGCGATCGACAGGCGGCGACCGTCGCGCAGCGAGACTTCG‑TGGCCGTCGTCCTTGCGCGGGGCAAAGCTACGGGCGATCACCTGGCGCCACAATTGGCCGAt                                                                                                          >  1:21593/1‑147 (MQ=255)                                                gAGCAGCACCAATTGGCCAGGCTCGGCATCCAGTGAGCGGGTGGCGATCGACAGGCGGCGACCGTCGCGCAGCGAGACTTCG‑TGGCCGTCGTCCTTGCGCGGGGCAAAGCTACGGGCGATCACCTGGCGCCACAATTGGCCGATCaga                                                                                                      <  4:231872/148‑1 (MQ=255)                                                  gcagcaCCAATTGGCCAGGCTCTGAATCCAGTGAGCGGGTGGCGATCGACAGGCGGCGACCGTCGCGCAGCGAGACTTCG‑TGGCCGTCGTCCTTGCGCGGGGCAAAGCTAAGGGCGATCACATGGCGCAACAATTgga                                                                                                              >  7:56441/1‑137 (MQ=255)                                                  gcagcaCCAATTGGCCAGGCTCGGCATCCAGTGTGCGGGTGGCGATCGACAGGCGGCGACCGTCGCGCAGCGAGACTTCG‑TGTCCGTCGTCCTTGCGCGGGGCAAAGCTACGGGTGATCACCTGGCGTCACAATTGGc                                                                                                              <  8:56441/138‑1 (MQ=255)                                                    agcaCCAATTGGCCAGGCTCGGCATCCAGTGAGCGGGTGGCGATCGACAGGCGGCGACCGTCGCGCAGCGAGACTTCG‑TGGCCGTCGTCCTTGCGCGGGGCAAAGCTACGGGCGATCACCTGGCGCCACAATTGGCCGATCAGAGGCt                                                                                                  >  6:317866/1‑148 (MQ=255)                                                     gcaCCAATTGGCCAGGCTCGGCATCCAGTGAGCGGGTGGCGATCGACAGGCGGCGACCGTCGCGCAGCGAGACTTCG‑TGGCCGTCGTCCTTGCGCGGGGCAAAGCTACGGGCGATCACCTGGCGCCACAATTGGCCGATCAGAGGCTCa                                                                                                >  6:2045/1‑149 (MQ=255)                                                      caCCAATTGGCCAGGCTCGGCATCCAGTGAGCGGGTGGCGATCGACAGGCGGCGACCGTCGCGCAGCGATACTTCG‑TGGCCGTCGTCCTTGCGCGGGGCAAAGCTACGGGCGATCACCTGGCGCCACAAtt                                                                                                                 <  5:267264/131‑1 (MQ=255)                                                      caCCAATTGGCCAGGCTCGGCATCCAGTGAGCGGGTGGCGATCGACAGGCGGCGACCGTCGCGCAGCGAGACTTCG‑TGGCCGTCGTCCTTGCGCGGGGCAAAGCTACGGGCGATCACCTGGCGCCACAATTGGCCGATCAGAGGCTCAc                                                                                               >  3:201439/1‑149 (MQ=255)                                                      caCCAATTGGCCAGGCTCGGCATCCAGTGAGCGGGTGGCGATCGACAGGCGGCGACCGTCGCGCAGCGAGACTTCG‑TGGCCGTCGTCCTTGCGCGGGGCAAAGCTACGGGCGATCACCTGGCGCAACAAtt                                                                                                                 >  6:267264/1‑131 (MQ=255)                                                          aaTTGGCCAGGCTCGGCATCCAGTGAGCGGGTGGCGATCGACAGGCGGCGACCGTCGCGCAGCGAGACTTCG‑TGGCCGTCGTCCTTGCGCGGGGCAAAGCTACGGGCGATCACCTGGCGCCACAATTGGCCGATCAGAGGCTCACCGAg                                                                                           <  1:324560/149‑1 (MQ=255)                                                                  aGGCTCGGCATCCAGTGAGCGGGTGGCGATCGACAGGCGGCGACCGTCGCGCAGCGAGACTTCG‑TGGCCGTCGTCCTTGCGCGGGGCAAAGCTACGGGCGATCACCTGGCGCCACAATTGGCCGATCAGAgg                                                                                                    >  5:44595/1‑132 (MQ=255)                                                                  aGGCTCGGCATCCAGTGAGCGGGTGGCGATCGACAGGCGGCGACCGTCGCGCAGCGAGACTTCG‑TGGCCGTCGTCCTTGCGCGGGGCAAAGCTACGGGCGATCACCTGGCGCCACAATTGGCCGATCAGAgg                                                                                                    <  6:44595/132‑1 (MQ=255)                                                                   ggCTCGGCATCCAGTGAGCGGGTGGCGATCGACAGGCGGCGACCGTCGCGCAGCGAGACTTCG‑TGGCCGTCGTCCTTGCGCGGGGCAAAGCTACGGGCGATCACCTGGCGCCACAATTGGCCGATCAGAGGCTCACCGAGCAACTcaca                                                                                  <  5:317866/149‑1 (MQ=255)                                                                     cTCGGCATCCAGTGAGCGGGTGGCGATCGACAGGCGGCGACCGTCGCGCAGCGAGACTTCG‑TGGCCGTCGTCCTTGCGCGGGGCAAAGCTACGGGCGATCACCTGGCGCCACAATTGGCCGATCAGAGGCTCACCGAGCAACTCGCAgg                                                                                <  5:2045/149‑1 (MQ=255)                                                                      tCGGCATCCAGTGAGCGGGTGGCGATCGACAGGCGGCGACCGTCGCGCAGCGAGACTTCG‑TGGCCGTCGTCCTTGCGCGGGGCAAAGCTACGGGCGATCACCTGGCGCCACAATTGGCCGATCAGAGGCTCACCGAGCAACTCGCAggc                                                                               >  6:18215/1‑149 (MQ=255)                                                                          cATCCAGTGAGCGGGTGGCGATCGACAGGCGGCGACCGTCGCGCAGCGAGACTTCG‑TGGCCGTCGTCCTTGCGCGGGGCAAAGCTACGGGCGATCACCTGGCGCCACAATTGGCCGATCAGAGGCTCACCGAGCAACTCGCAGGCGGcc                                                                           >  5:246336/1‑149 (MQ=255)                                                                                 tGAGCGGGTGGCGATCGACAGGCGGCGACCGTCGCGCAGCGAGACTTCG‑TGGCCGTCGTCCTTGCGCGGGGCAAAGCTACGGGCGATCACCTGGCGCCACAATTGGCCGATCAGAGGCTCACCGAGCAACTCGCAGGCGGCCGGGTTgg                                                                    <  7:318009/149‑1 (MQ=255)                                                                                   aGCGGGTGGCGATCGACAGGCGGCGACCGTCGCGCAGCGAGACTTCG‑TGGCCGTCGTCCTTGCGCGGGGCAAAGCTACGGGCGATCACCTGGCGCCACAATTGGCCGATCAGAGGCTCACCGAGCAACTCGCAGGCGGCCGGGTTGGc                                                                   <  5:55668/148‑1 (MQ=255)                                                                                        gTGGCGATCGACAGGCGGCGACCGTCGCGCAGCGAGACTTCG‑TGGCCGTCGTCCTTGCGCGGGGCAAAGCTACGGGCGATCACCTGGCGCCACAATTGGCCGATCAGAGGCTCACCGAGCAACTCGCAGGCGGCCGGGTTGGCTTcg‑cg                                                            >  8:145012/1‑149 (MQ=255)                                                                                           gCGATCGACAGGCGGCGACCGTCGCGCAGCGAGACTTCG‑TGGCCGTCGTCCTTGCGCGGGGCAAAGCTACGGGCGATCACCTGGCGCCACAATTGGCCGATCAGAGGCTCACCGAGCAACTCGCAGGCGGCCGGGTTGGCTTCG‑CGCAc                                                         <  2:179298/149‑1 (MQ=255)                                                                                           gCGATCGACAGGCGGCGACCGTCGCGCAGCGAGACTTCG‑TGGCCGTCGTCCTTGCGCGGGGCAAAGCTACGGGCGATCACCTGGCGCCACAATTGGCCGATCAGAGGCTCACCGAGCAACTCGCAGGCGGCCGGGTTGGCTTCG‑CGCAc                                                         <  4:196868/149‑1 (MQ=255)                                                                                                 gACAGGCGGCGACCGTCGCGCAGCGAGACTTCG‑TGGCCGTCGTCCTTGCGCGGGGCAAAGCTACGGGCGATCACCTGGCGCCACAATTGGCCGATCAGAGGCTCACCGAGCAACTCGCAGGCGGCCGGGTTGGCTTCG‑CGCACCAGGcc                                                   <  3:50832/149‑1 (MQ=255)                                                                                                    aGGCGGCGACCGTCGCGCAGCGAGACTTCG‑TGGCCGTCGTCCTTGCGCGGGGCAAAGCTACGGGCGATCACCTGGCGCCACAATTGGCCGATCAGAGGCTCACCGAGCAACTCGCAGGCGGCCGGGTTGGCTTCG‑CGCACCAGGCCCt                                                 >  3:99335/1‑148 (MQ=255)                                                                                                         gcgACCGTCGCGCAGCGAGACTTCG‑TGGCCGTCGTCCTTGCGCGGGGCAAAGCTACGGGCGATCACCTGGCGCCACAATTGGCCGATCAGAGGCTCAcc                                                                                              <  7:71341/99‑1 (MQ=255)                                                                                                         gcgACCGTCGCGCAGCGAGACTTCG‑TGGCCGTCGTCCTTGCGCGGGGCAAAGCTACGGGCGATCACCTGGCGCCACAATTGGCCGATCAGAGGCTCAcc                                                                                              >  8:71341/1‑99 (MQ=255)                                                                                                           tttgccccgcgcaaggacgacggccacgaagtctcgctgcgcgGGGCAAAGCTACGGGCGATCACCTGGCGCCACAATTGGCCGATCAGAGGCTCACCGAGCAACTCGCAGGCGGCCggg                                                                        >  3:323150‑M2/44‑120 (MQ=255)                                                                                                           tttgccccgcgcaaggacgacggccacgaagtctcgctgcgcgGGGCAAAGCTACGGGCGATCACCTGGCGCCACAATTGGCCGATCAGAGGCTCACCGAGCAACTCGCAGGCGGCCggg                                                                        <  4:323150‑M2/77‑1 (MQ=255)                                                                                                             ccGTCGCGCAGCGAGACTTCG‑TGGCCGTCGTCCTTGCGCGGGGCAAAGCTACGGGCGATCACCTGGCGCCACAATTGGCCGATCAGAGGCTCACCGAGCAACTCGCAGGCGGCCGGGTTGGCTTCG‑CGCACCAGGCCCTGACCATcgat                                       >  2:45398/1‑149 (MQ=255)                                                                                                              cGTCGCGCAGCGAGACTTCG‑TGGCCGTCGTCCTTGCGCGGGGCAAAGCTACGGGCGATCACCTGGCGCCACAATTGGCCGATCAGAGGCTCACCGAGCAACTCGCAGGCGGCCGGGTTGGCTTCG‑CGCACCAGGCCCTGACCATcgat                                       >  3:78722/1‑148 (MQ=255)                                                                                                               gTCGCGCAGCGAGACTTCG‑TGGCCGTCGTCCTTGCGCGGGGCAAAGCTACGGGCGATCACCTGGCGCCACAATTGGCCGATCAGAGGCTCACCGAGCAACTCGCAGGCGGCCGGGTTGGCTTCG‑CGCACCAGGCCCTGACCATcgatca                                     <  4:198409/149‑1 (MQ=255)                                                                                                                cccgcgcaaggacgacggccacgaagtctcgctgcgcgGGGCAAAGCTACGGGCGATCACCTGGCGCCACAATTGGCCGATCAGAGGCTCACCGAGCAACTCGCAGGCGGCCGGGTTGGCTTCG‑CGCACCAGGCCCTGACCATcgatca                                     >  3:334455‑M2/39‑149 (MQ=255)                                                                                                                  GCGCAGCGAGACTTCG‑TGGCCGTCGTCCTTGCGCGGGGCAAAGCTACGGGCGATCACCTGGCGCCACAATTGGCCGATCAGAGGCTCACCGAGCAACTCGCAGGCGGCCGGGTTGGCTTCG‑CGCACCAGGCCCTGACCATcgatcacga                                  <  7:50229‑M1/149‑1 (MQ=255)                                                                                                                  GCGCAGCGAGACTTCG‑TGGCCGTCGTCCTTGCGCGGGGCAAAGCTACGGGCGATCACCTGGCGCCACAATTGGCCGATCAGAGGCTCACCGAGCAACTCGCAGGCGGCCGGGTTGGCTTCG‑CGCACCAGGCCCTGACCATcgatcacg                                   <  6:240643‑M1/148‑1 (MQ=255)                                                                                                                        cGAGACTTCG‑TGGCCGTCGTCCTTGCGCGGGGCAAAGCTACGGGCGATCACCTGGCGCCACAATTGGCCGATCAGAGGCTCACCGAGCAACTCGCAGGCGGCCGGGTTGGCTTCG‑CGCACCAGGCCCTGACCATCGATCACGATCAccc                            >  2:89643/1‑149 (MQ=255)                                                                                                                        cGAGACTTCG‑TGGCCGTCGTCCTTGCGCGGGGCAAAGCTACGGGCGATCACCTGGCGCCACAATTGGCCGATCAGAGGCTCACCGAGCAACTCGCAGGCGGCCGGGTTGGCTTCG‑CGCACCAGGCCCTGACCATCGATCACGATCAccc                            <  2:21593/149‑1 (MQ=255)                                                                                                                             cTTCG‑TGGCCGTCGTCCTTGCGCGGGGCAAAGCTACGGGCGATCACCTGGCGCCACAATTGGCCGATCAGAGGCTCACCGAGCAACTCGCAGGCGGCCGGGTTGGCTTCG‑CGCACCAGGCCCTGACCATCGATCACGATCACCCCGCCa                       <  4:201439/149‑1 (MQ=255)                                                                                                                              ttCG‑TGGCCGTCGTCCTTGCGCGGGGCAAAGCTACGGGCGATCACCTGGCGCCACAATTGGCCGATCAGAGGCTCACCGAGCAACTCGCAGGCGGCCGGGTTGGCTTCG‑CGCACCAGGCCCTGACCATCGATCACGATCACCCCGCCAg                      >  8:40733/1‑149 (MQ=255)                                                                                                                              ttCG‑TGGCCGTCGTCCTTGCGCGGGGCAAAGCTACGGGCGATCACCTGGCGCCACAATTGGCCGATCAGAGGCTCACCGAGCAACTCGCAGGCGGCCGGGTTGGCTTCG‑CGCACCAGGCCCGGACCATCGCTCACGATCACCCCGCCAg                      >  7:149575/1‑149 (MQ=255)                                                                                                                                   tGGCCGTCGTCCTTGCGCGGGGCAAAGCTACGGGCGATCACCTGGCGCCACAATTGGCCGATCAGAGGCTCACCGAGCAACTCGCAGGCGGCCGGGTTGGCTTCG‑CGCACCAGGCCCTGACCATCGATCACGATCACCCCGCCAGgcag                  >  7:155915/1‑149 (MQ=255)                                                                                                                                      ccGTCGTCCTTGCGCGGGGCAAAGCTACGGGCGATCACCTGGCGCCACAATTGGCCGATCAGAGGCTCACCGAGCAACTCGCAGGCGGCCGGGTTGGCTTCG‑CGCACCAGGCCCTGACCATCGATCACGATCACCCCGCCAGGCAGCaa               <  7:145012/149‑1 (MQ=255)                                                                                                                                       cgtcgtCCTTGCGCGGGGCAAAGCTACGGGCGATCACCTGGCGCCACAATTGGCCGATCAGAGGCTCACCGAGCAACTCGCAGGCGGCCGGGTTGGCTTCG‑CGCACCAGGCCCTGACCATCGATCACGATCACCCCGCCAGgca                   <  5:184181/144‑1 (MQ=255)                                                                                                                                       cgtcgtCCTTGCGCGGGGCAAAGCTACGGGCGATCACCTGGCGCCACAATTGGCCGATCAGAGGCTCACCGAGCAACTCGCAGGCGGCCGGGTTGGCTTCG‑CGCACCAGGCCCTGACCATCGATCACGATCACCCCGCCAGgca                   >  6:184181/1‑144 (MQ=255)                                                                                                                                         tcgtcCTTGCGCGGGGCAAAGCTACGGGCGATCACCTGGCGCCACAATTGGCCGATCAGAGGCTCACCGAGCAACTCGCAGGCGGCCGGGTTGGCTTCG‑CGCACCAGGCCCTGACCATCGATCACGATCACCCCGCCAGGCAGCAAGTc            <  8:152769/149‑1 (MQ=255)                                                                                                                                           gtcCTTGCGCGGGGCAAAGCTACGGGCGATCACCTGGCGCCACAATTGGCCGATCAGAGGCTCACCGAGCAACTCGCAGGCGGCCGGGTTGGCTTCGCCGCACCAGGCCCTGACCATCGATCACGATCACCCCGCCAGGCAGCAAGTc            <  1:89643/148‑1 (MQ=255)                                                                                                                                              cTTGCGCGGGGCAAAGCTACGGGCGATCACCTGGCGCCACAATTGGCCGATCAGAGGCTCACCGAGCAACTCGCAGGCGGCCGGGTTGGCTTCG‑CGCACCAGGCCCTGACCATCGATCACGATCACCCCGCCAGGCAGCAAGTCcag         >  6:75000/1‑147 (MQ=255)                                                                                                                                                   gcgGGGCAAAGCTACGGGCGATCACCTGGCGCCACAATTGGCCGATCAGAGGCTCACCGAGCAACTCGCAGGCGGCCGGGTTGGCTTCG‑CGCACCAGGCCCTGACCATCGCGCACGATCACCCCGCCAGGCAGCAAGTCAAGCAGGTTc  >  2:58011‑M2/4‑149 (MQ=255)                                                                                                                                                   gcgGGGCAAAGCTACGGGCGATCACCTGGCGCCACAATTGGCCGATCAGAGGCTCACCGAGCAACTCGCAGGCGGCCGGGTTGGCTTCG‑CGCACCAGGCCCTGACCATCGATCACGATCACCCCGCCAGGCAGCAAGTCCAGCAGGTTc  <  5:240643‑M2/146‑1 (MQ=255)                                                                                                                                                      |                                                                                                                                                   TGGCGAGCCAGCTGGTCCTGGAGGCGACGGGTTTCAGTCAGGTCGTTGAGCAGCACCAATTGGCCAGGCTCGGCATCCAGTGAGCGGGTGGCGATCGACAGGCGGCGACCGTCGCGCAGCGAGACTTCG‑TGGCCGTCGTCCTTGCGCGGGGCAAAGCTACGGGCGATCACCTGGCGCCACAATTGGCCGATCAGAGGCTCACCGAGCAACTCGCAGGCGGCCGGGTTGGCTTCG‑CGCACCAGGCCCTGACCATCGATCACGATCACCCCGCCAGGCAGCAAGTCCAGCAGGTTC  >  NC_002947/4963119‑4963412

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.