New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 4990473 | 66 (1.120) | 5 (0.090) | 5/242 | NT | 6.9% | coding (659/1242 nt) | PP_4399 | glutamine synthetase |
? | NC_002947 | = 4990503 | 72 (1.290) | coding (629/1242 nt) | PP_4399 | glutamine synthetase |
TTGACGTTGGGTGCAAACAGGGCGGTGAAGTCGGCCATGCACGCCTGCAACCCGCCGATGAAATGGTGGAAGGTTTCTGTCGGCAGGCCTTGCTCGTCACTGAATACGTTACGGCCGCTGCCGGCCTCGACCAGGCTCTGGTGAATGTGCATGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4990320‑4990473 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgcatggCCAAGCCGCTGGCGCGTACGCCCGGCAGTTCCATGCACATTCACCAGAGCCTGGTCGAGGCCGGCAGCGG‑CCGTAACGTATTCAGTGACGAGCAAGGCCTGCCGACAGAAACCTTCCACCATTTCATCGGCGGGTTGCAGGCGTG < NC_002947/4990503‑4990359 TTGACGTTGGGTGCAAACAGGGCGGTGAAGTCGGCCATGCACGCCTGCAACCCGCCGATGAAATGGTGGAAGGTTTCTGTCGTCAGGCCTTGCTCGTCACTGAATACGTTACGGCCGCTGCCGGCCTCGACCAGGCTCTGGTGAATGTG < 5:365325/149‑1 TTGGGTGCAAACAGGGCGGTGAAGTCGGCCATGCACGCCTGCAACCCGCCGATGAAATGGTGGAAGGTTTCTGTCGGCAGGCCTTGCTCGTCACTGAATACGTTACGGCCGCTGCCGGCCTCGCCCAGGCTCTGGTGAATGTGCATGG > 7:351946/1‑148 GGTGAAGTCGGCCATGCACGCCTGCAACCCGCCGATGAAATGGTGGAAGGTTTCTGTCGGCAGGCCTTGCTCGTCACTGAATACGTTACGGCCGCTGCCGGCCTCGACCAGGCTCTGGTGAATGTGCATG > 3:315496/1‑130 GGTGAAGTCGGCCATGCACGCCTGCAACCCGCCGATGAAATGGTGGAAGGTTTCTGTCGGCAGGCCTTGCTCGTCACTGAATACGTTACGGCCGCTGCCGGCCTCGACCAGGCTCTGGTGAATGTGCATG < 4:315496/130‑1 GGCCATGCACGCCTGCAACCCGCCGATGAAATGGTGGAAGGTTTCTGTCGGCAGGCCTTGCTCGTCACTGAATACGTTACGGCCGCTGCCGGCCTCGACCAGGCTCTGGTGAATGTGCATGGCCAAGCCGCTGGCGCGTACGCCCGG > 6:367802/1‑147 CGCCTGCAACCCGCCGATGAAATGGTGGAAGGTTTCTGTCGGCAGGCCTTGCTCGTCACTGAATACGTTACGGCCGCTGCCGGCCTCGACCAGGCTCTGGTGAATGTGCATGGCCAAGCCGCTGGCGCGTACGCCCGGCAGTTCCATGC < 5:367802/149‑1 CCTGCAACCCGCCGATGAACTCGTGTAAGGGTGCTGTCGGCAGGCCTTGCTCGTCACTGAATACGTTACGGCCGCTGCCGGCCTCGACCAGGCTCTGGTGAATGTGCATGGCCAAGCCGCTGGCGCGTACGCCCGGCAGTTCCATGCAC < 4:191797/149‑1 CTGCAACCCGCCGATGAAATGGTGGAAGGTTTCTGTCGGCAGGCCTTGCTCGTCACTGAATACGTTACGGCCGCTGCCGGCCTCGACCAGGCTCTGGTGAATGTGCATGGCCAAGCCGCTGGCGCGTACGCCCGGCAGTTCCATGCACA > 6:108664/1‑149 AACCCGCCGATGAAATGGTGGAAGGTTTCTGTCGGCAGGCCTTGCTCGTCACTGAATACGTTACGGCCGCTGCCGGCCTCGACCAGGCTCTGGTGAATGTGCATGGCCAAGCCGCTGGCGCGTACGCCCGGCAGTTCCATGCACATTCA < 5:108664/149‑1 GCATGGCCAAGCCGCTGGCGCGTACGCCCGGCAGTTCCATGCACATTCACCAGAGCCTGGTCGAGGCCGGCAGCGG‑CCGTAACGTATTCAGTGACGAGCAAGGCCTGCCGACAGAAACCTTCCACCATTTCATCGGCGGGTTGCAGGCG > 7:253221/1‑149 ATGGCCAAGCCGCTGGCGCGTACGCCCGGCAGTTCCATGCACATTCACCAGAGCCTGGTCGAGGCCGGCAGCGG‑CCGTAACGTATTCAGTGACGAGCAAGGCCTGCCGACAGAAACCTTCCACCATTTCATCGGCGGGTTGCAGGCGTG < 1:162956/149‑1 GGCCAAGCCGCTGGCGCGTACGCCCGGCAGTTCCATGCACATTCACCAGAGCCTGGTCGAGGCCGGCAGCGGCCCGTAACGTATTCAGTGACGAGCAAG < 1:3735/99‑1 GGCCAAGCCGCTGGCGCGTACGCCCGGCAGTTCCATGCACATTCACCAGAGCCTGGTCGAGGCCGGCAGCGG‑CCGTAACGTATTCAGTGACGAGCAAG > 2:3735/1‑98 TTGACGTTGGGTGCAAACAGGGCGGTGAAGTCGGCCATGCACGCCTGCAACCCGCCGATGAAATGGTGGAAGGTTTCTGTCGGCAGGCCTTGCTCGTCACTGAATACGTTACGGCCGCTGCCGGCCTCGACCAGGCTCTGGTGAATGTGCATGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4990320‑4990473 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgcatggCCAAGCCGCTGGCGCGTACGCCCGGCAGTTCCATGCACATTCACCAGAGCCTGGTCGAGGCCGGCAGCGG‑CCGTAACGTATTCAGTGACGAGCAAGGCCTGCCGACAGAAACCTTCCACCATTTCATCGGCGGGTTGCAGGCGTG < NC_002947/4990503‑4990359 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |