New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5055940 =	46 (0.780)	4 (0.070)	4/244	NT	9.3%	coding (387/942 nt)	gsiC	glutathione ABC transporter permease
	?	NC_002947	5055976 =	34 (0.600)					coding (351/942 nt)	gsiC	glutathione ABC transporter permease

CTCAATGACCAGCGGCAGAACTGTGCTGCAGGAGGTATCCCTGGTTCTACCGTGGACGCTGCAATTGACGTTTGCATCCGTGTTGATCGGCCTCGTGTTCGGTCTGCCCCTTGGTGTCTGGGCGGCGCTTCGTCGCAACGCCTGGCCAGAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/5056090‑5055940 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccagacACCAAGGGGCAGACCGAACACGAGGCCGATCAACACGGATGCAAACGTCAATTGCAGCGTCCACGGTAGAACCAGGGATACCTCCTGCAGCACAGTTCTGCCGCTGGTCATTGAGACCCCGAAATTCCCTGAGAGCATGTCGCCGA  >  NC_002947/5055976‑5056121                                                                                                                                                                                                                                                                                                           CTCAATGACCAGCGGCAGAACTGTGCTGCAGGAGGTATCCCTGGTTCTACCGTGGACGCTGCAATTGACGTTTGCATCCGTGTTGATCGGCCTCGTGTTCGGTCTGCCCCTTGGTGTCTGGGCGGCGCTTCGTCGCAACGCCTGGC                                                                                                                                                         >  1:36529/1‑146  TCAATGACCAGCGGCAGAACTGTGCTGCAGGAGGTATCCCTGGTTCTACCGTGGACGCTGCAATTGACGTTTGCATCCGTGTTGATCGGCCTCGTGTTCGGTCTGCCCCTTGGTGTCTGGGCGGCGCTTCGTCGCAACGCCTGGCCAGA                                                                                                                                                     >  5:271151/1‑149                                                                                                                    GTCTGGGCGGCGCTTCGTCGCAACGCCTGGCCAGACACCAAGGGGCAGACCGAACACGAGGCCGATCAACACGGATGCAAACGTCAATTGCAGCGTCCACGGCAGAACCAGGGATACCTCCTGCAGCACAGTTCTGCCGCTGGTCATT                                    >  4:306899/1‑148                                                                                                                       TGGGCGGCGCTTCGTCGCAACGCCTGGCCAGACACCAAGGGGCAGACCGAACACGAGGCCGATCAACACGGATGCAAACGTCAATTGCAGCGTCCACGGTAGAACCAGGGAT                                                                     <  5:98466/112‑1                                                                                                                       TGGGCGGCGCTTCGTCGCAACGCCTGGCCAGACACCAAGGGGCAGACCGAACACGAGGCCGATCAACACGGATGCAAACGTCAATTGCAGCGTCCACGGTAGAACCAGGGAT                                                                     >  6:98466/1‑112                                                                                                                             GCGCTTCGTCGCAACGCCTGGCCAGACACCAAGGGGCAGACCGAACACGAGGCCGATCAACACGGATGCAAACGTCAATTGCAGCGTCCACGGCAGAACCAGGGATACCTCCTGCAGCACAGTTCTGCCGCTGGTCATTGAGACCCCGA                          <  3:306899/149‑1                                                                                                                                                  CCAGACACCAAGGGGCAGACCGAACACGAGGCCGATCAACACGGATGCAAACGTCAATTGCAGCGTCCACGGTAGAACCAGGGATACCTCCTGCAGCACAGTTCTGCCGCTGGTCATTGAGACACCGAAATTCCCTGAGAGCATGTCGC     >  1:375486/1‑149                                                                                                                                                    AGACACCAAGGGGCAGACCGAACACGAGGCCGATCAACACGGATGCAAACGTCAATTGCAGCGTCCACGGTAGAACCAGTGATACCTCCTGCAGGACAGTTCTGCCTCTGGTCATTGAGACCCCGAAATTCCCTGAGAGCATGTCGCCG   <  4:349500/149‑1                                                                                                                                                     GACACCAAGGGGCAGACGGAACACGATGCCGATCAACGCGGATGCAAACGTCAATTGCAGCGTCCACGGTAGAACCAGGGATACCTCCTGCAGCACAGTTCTGCCGCTGGTCATTGAGACCCCGAAATTCCCTGAGAGCATGTCGCCGA  <  1:76737/149‑1                                                                                                                                                                                                                                                                                                           CTCAATGACCAGCGGCAGAACTGTGCTGCAGGAGGTATCCCTGGTTCTACCGTGGACGCTGCAATTGACGTTTGCATCCGTGTTGATCGGCCTCGTGTTCGGTCTGCCCCTTGGTGTCTGGGCGGCGCTTCGTCGCAACGCCTGGCCAGAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/5056090‑5055940 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccagacACCAAGGGGCAGACCGAACACGAGGCCGATCAACACGGATGCAAACGTCAATTGCAGCGTCCACGGTAGAACCAGGGATACCTCCTGCAGCACAGTTCTGCCGCTGGTCATTGAGACCCCGAAATTCCCTGAGAGCATGTCGCCGA  >  NC_002947/5055976‑5056121

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.