New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5134678	49 (0.830)	3 (0.050)	3/246	NT	6.2%	coding (262/600 nt)	PP_4520	hypothetical protein
	?	NC_002947	= 5134729	44 (0.770)					coding (211/600 nt)	PP_4520	hypothetical protein

GCGTGAAGCGGCCACCTGCCCCAGCGTCACCCGTGGCAGCCCCCCCAGCAACGGGTTCAGGTACAGCAGCTTGCGCGCCTTGCGCCAGGTGCCGTCGGGCACGATCAGCAGCAAAGGTTTGTCGCCCGCCTCGCCATAAGCTGTCAGCACCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5134526‑5134678 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acctgCTCGCCACCCCCGGATACCACCCGGTGCTGCTGTTCCCGGGTGATGACGCCCAGGTGCTGACAGCTTATGGCGAGGCGGGCGACAAACCTTTGCTGCTGATCGTGCCCGACGGCACCTGGCGCAAGGCGCGCAAGCTGCTGTACCT  <  NC_002947/5134729‑5134584                                                                                                                                                                                                                                                                                                             GCGTGAAGCGGCCACCTGCCCCAGCGTCACCCGTGGCAGCCCCCCCAGCAACGGGTTCAGGTACAGCAGCTTGCGCGCCTTGCGCCAGGTGCCGTCGGGCACGATCAGCAGCAAAGGTTTGTCGCCCGCCTCGCCATAAGCTGTCAGCA                                                                                                                                                        >  2:144104/1‑149                                                       GTTCAGGTACAGCAGCTTGCGCGCCTTGCGCCAGGTGCCGTCGGGCACGATCAGCAGCAAAGGTTTGTCGCCCGCCTCGCCATAAGCTGTCAGCACCTGCTCGCCACCCCCGGATACCACCCGGTGCTGCTGTTCCCGGGTGATGACGC                                                                                                  >  2:192725/1‑149                                                          CAGGTACAGCAGCTTGCGCGCCTTGCGCCAGGTGCCGTCGGGCACGATCAGCAGCAAAGGTTTGTCGCCCGCCTCGCCATAAGCTGTCAGCACCTGCTCGCCACCCCCGGATACCACCCGGTGCTGCTGTTCCCGGGTGATGACGCCC                                                                                                <  1:192725/148‑1                                                           AGGTACAGCAGCTTGCGCGCCTTGCGCCAGGTGCCGTCGGGCACGATCAGCAGCAAAGGTTTGTCGCCCGCCTCGCCATAAGCTGTCAGCACCTGCTCGCCACCCCCGGATACCACCCGGTGCTGCTGTTCCCGGGTGATGACGCCCA                                                                                               <  1:144104/148‑1                                                                                                                                                       CTGCTCGCCACCCCCGGATACCACCCGGTGCTGCTGTTCCCGGGTGATGACGCCCAGGTGCTGACAGCTTATGGCGAGGCGGGCGACAAACCTTTGCTGCTGATCGTGCCCGACGGCACCTGGCGCAAGGCGCGCAAGCTGCTGTACCT  <  7:160526/149‑1                                                                                                                                                        TGCTCGCCACCCCCGGATACCACCCGGTGCTGCTGTTCCCGGGTGATGACGCCCAGGTGCTGACAGCTTATGGCGAGGCGGGCGACAAACCTTTGCTGCTGATCGTGCCCGACGGCACCTGGCGCAAGGCGCGCAAGCTGCTGTACCT  >  6:38565/1‑148                                                                                                                                                        TGCTCGCCACCCCCGGATACCACCCGGTGCTGCTGTTCCCGGGTGATGACGCCCAGGTGCTGACAGCTTATGGCGAGGCGGGCGACAAACCTTTGCT                                                     >  5:295401/1‑97                                                                                                                                                        TGCTCGCCACCCCCGGATACCACCCGGTGCTGCTGTTCCCGGGTGATGACGCCCAGGTGCTGACAGCTTATGGCGAGGCGGGCGACAAACCTTTGCT                                                     <  6:295401/97‑1                                                                                                                                                                                                                                                                                                             GCGTGAAGCGGCCACCTGCCCCAGCGTCACCCGTGGCAGCCCCCCCAGCAACGGGTTCAGGTACAGCAGCTTGCGCGCCTTGCGCCAGGTGCCGTCGGGCACGATCAGCAGCAAAGGTTTGTCGCCCGCCTCGCCATAAGCTGTCAGCACCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5134526‑5134678 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acctgCTCGCCACCCCCGGATACCACCCGGTGCTGCTGTTCCCGGGTGATGACGCCCAGGTGCTGACAGCTTATGGCGAGGCGGGCGACAAACCTTTGCTGCTGATCGTGCCCGACGGCACCTGGCGCAAGGCGCGCAAGCTGCTGTACCT  <  NC_002947/5134729‑5134584

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.