New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 513467849 (0.830)3 (0.050) 3/246 NT 6.2% coding (262/600 nt) PP_4520 hypothetical protein
?NC_002947 = 5134729 44 (0.770)coding (211/600 nt) PP_4520 hypothetical protein

CCCCAGCGTCACCCGTGGCAGCCCCCCCAGCAACGGGTTCAGGTACAGCAGCTTGCGCGCCTTGCGCCAGGTGCCGTCGGGCACGATCAGCAGCAAAGGTTTGTCGCCCGCCTCGCCATAAGCTGTCAGCACCTGGGCGTCATCACCCGGGAACAGCAGCACCGGGTGGTATCCGGGGGTGGCGAGCAGGTCATGCAGGTCATCGAACACCTCTCCAATCCGCAGCTCGGCATTGTTCAGGCCAAGGGCAGCCAGGCGCGCCGTGTTCAGGGCATGGGCAGT  >  NC_002947/5134544‑5134825
                                                                                                                                      |                                                                                                                                                   
ccccAGCGTCACCCGTGGCAGCCCCCCCAGCAACGGGTTCAGGTACAGCAGCTTGCGCGCCTTGCGCCAGGTGCCGTCGGGCACGATCAGCAGCAAAGGTTTGTCGCCCGCCTCGCCATAAGCTGTCAGCACCTGGGCGTCATCACCCg                                                                                                                                       >  5:38565/1‑149 (MQ=255)
 cccAGCGTCACCCGTGGCAGCCCCCCCAGCAACGGGTTCAGGTACAGCAGCTTGCGCGCCTTGCGCCAGGTGCCGTCGGGCACGATCAGCAGCAAAGGTTTGTCGCCCGCCTCGCCATAAGCTGTCAGCACCTGGGCGTCATCACCCgg                                                                                                                                      <  4:327476/149‑1 (MQ=255)
           cccGTGGCAGCCCCCCCAGCAACGGGTTCAGGTACAGCAGCTTGCGCGCCTTGCGCCAGGTGCCGTCGGGCACGATCAGCAGCAAAGGTTTGTCGCCCGCCTCGCCATAAGCTGTCAGCACCTGGGCGTCATCACCCgg                                                                                                                                      >  7:140166/1‑139 (MQ=255)
           cccGTGGCAGCCCCCCCAGCAACGGGTTCAGGTACAGCAGCTTGCGCGCCTTGCGCCAGGTGCCGTCGGGCACGATCAGCAGCAAAGGTTTGTCGCCCGCCTCGCCATAAGCTGTCAGCACCTGGGCGTCATCACCCgg                                                                                                                                      <  8:140166/139‑1 (MQ=255)
            ccGTGGCAGCCCCCCCAGCAACGGGTTCAGGTACAGCAGCTTGCGCGCCTTGCGCCAGGTGCCGTCGGGCACGATCAGCAGCAAAGGTTTGTCGCCCGCCTCGCCATAAGCTGTCAGCACCTGGGCGTCATCACCCGGGAAcagca                                                                                                                              <  1:315710/146‑1 (MQ=255)
            ccGTGGCAGCCCCCCCAGCAACGGGTTCAGGTACAGCAGCTTGCGCGCCTTGCGCCAGGTGCCGTCGGGCACGATCAGCAGCAAAGGTTTGTCGCCCGCCTCGCCATAAGCTGTCAGCACCTGGGCGTCATCACCCGGGAAcagca                                                                                                                              >  2:315710/1‑146 (MQ=255)
            ccGTGGCAGCCCCCCCAGCAACGGGTTCAGGTACAGCAGCTTGCGCGCCTTGCGCCAGGTGCCGTCGGGCACGATCAGCAGCAAAGGTTTGTCGCCCGCCTCGCCATAAGCTGTCAGCACCTGGGCGTCATCACCCGGGAACAgcagca                                                                                                                           >  2:244011/1‑149 (MQ=255)
                 gCAGCCCCCCCAGCAACGGGTTCAGGTACAGCAGCTTGCGCGCCTTGCGCCAGGTGCCGTCGGGCACGATGAGCAGCAAAGGTTTGTCGCCCGCCTCGCCATAAGCTGTCAGCACCTGGGCGTCATCACCCGGGAACAGCAGCACCgg                                                                                                                       <  1:120252/148‑1 (MQ=255)
                       cccccAGCAACGGGTTCAGGTACAGCAGCTTGCGCGCCTTGCGCCAGGTGCCGTCGGGCACGATCAGCAGCAAAGGTTTGTCGCCCGCCTCGCCATAAGCTGTCAGCACCTGGGCGTCATCACCCg                                                                                                                                       <  5:290017/126‑1 (MQ=255)
                       cccccAGCAACGGGTTCAGGTACAGCAGCTTGCGCGCCTTGCGCCAGGTGCCGTCGGGCACGATCAGCAGCAAAGGTTTGTCGCCCGCCTCGCCATAAGCTGTCAGCACCTGGGCGTCATCACCCg                                                                                                                                       >  6:290017/1‑126 (MQ=255)
                       cccccAGCAACGGGTTCAGGTACAGCAGCTTGCGCGCCTTGCGCCAGGTGCCGTCGGGCACGATCAGCAGCAAAGGTTTGTCGCCCGCCTCGCCATAAGCTGTCAGCACCTGGGCGTCATCACCCGGGAACAGCAGCACCGGGTGGTAt                                                                                                                >  8:184359/1‑149 (MQ=255)
                         cccAGCAACGGGTTCAGGTACAGCAGCTTGCGCGCCTTGCGCCAGGTGCCGTCGGGCACGATCAGCAGCAAAGGTTTGTCGCCCGCCTCGCCATAAGCTGTCAGCACCTGGGCGTCATCACCCGGGAACAGCAGCACCGGGTGGTATcc                                                                                                              >  5:176262/1‑149 (MQ=255)
                           cAGCAACGGGTTCAGGTACAGCAGCTTGCGCGCCTTGCGCCAGGTGCCGTCGGGCACGATCAGCAGCAAAGGTTTGTCGCCCGCCTCGCCATAAGCTGTCAGCACCTGGGCGTCATCACCCGGGAACAGCAGCACCGGGTGGTATCCgg                                                                                                            >  4:50168/1‑149 (MQ=255)
                            aGCAACGGGTTCAGGTACAGCAGCTTGCGCGCCTTGCGCCAGGTGCCGTCGGGCACGATCAGCAGCAAAGGTTTGTCGCCCGCCTCGCCATAAGCTGTCAGCACCTGGGCGTCATCACCCGGGAACAGCAGCACCGGGTGGTATCCggg                                                                                                           <  6:176262/149‑1 (MQ=255)
                                aCGGGTTCAGGTACAGCAGCTTGCGCGCCTTGCGCCAGGTGCCGTCGGGCACGATCAGCAGCAAAGGTTTGTCGCCCGCCTCGCCATAAGCTGTCAGCACCTGGGCGTCATCACCCGGGAACAGCAGCACCGGGTGGTATCCGGGGGTg                                                                                                       >  1:65681/1‑149 (MQ=255)
                                  gggTTCAGGTACAGCAGCTTGCGCGCCTTGCGCCAGGTGCCGTCGGGCACGATCAGCAGCAAAGGTTTGTCGCCCGCCTCGCCATAAGCTGTCAGCACCTGGGCGTCATCACCCGGGAACAGCAGCACCGGGTGGTATCCGGGGGTGGc                                                                                                     >  6:77835/1‑149 (MQ=255)
                                    gTTCAGGTACAGCAGCTTGCGCGCCTTGCGCCAGGTGCCGTCGGGCACGATCAGCAGCAAAGGTTTGTCGCCCGCCTCGCCATAAGCTGTCAGCACCTGctcgccacccccggataccacccggtgctgctgttcccgggtgatgacgc                                                                                                   >  2:192725‑M1/1‑99 (MQ=255)
                                       cAGGTACAGCAGCTTGCGCGCCTTGCGCCAGGTGCCGTCGGGCACGATCAGCAGCAAAGGTTTGTCGCCCGCCTCGCCATAAGCTGTCAGCACCTGctcgccacccccggataccacccggtgctgctgttcccgggtgatgacgccc                                                                                                 <  1:192725‑M1/148‑53 (MQ=255)
                                        aGGTACAGCAGCTTGCGCGCCTTGCGCCAGGTGCCGTCGGGCACGATCAGCAGCAAAGGTTTGTCGCCCGCCTCGCCATAAGCTGTCAGCACCTGctcgccacccccggataccacccggtgctgctgttcccgggtgatgacgccca                                                                                                <  1:144104‑M1/148‑54 (MQ=255)
                                        aGGTACAGCAGCTTGCGCGCCTTGCGCCAGGTGCCGTCGGGCACGATCAGCAGCAAAGGTTTGTCGCCCGCCTCGCCATAAGCTGTCAGCACCTGGGCGTCATCACCCGGGAACAGCAGCACCGGGTGGTATCCGGGGGTGGCGAGcag                                                                                               <  7:160526‑M2/149‑4 (MQ=255)
                                        aGGTACAGCAGCTTGCGCGCCTTGCGCCAGGTGCCGTCGGGCACGATCAGCAGCAAAGGTTTGTCGCCCGCCTCGCCATAAGCTGTCAGCACCTGGGCGTCATCACCCGGGAACAGCAGCACCGGGTGGTATCCGGGGGTGGCGAGca                                                                                                >  6:38565‑M2/1‑146 (MQ=255)
                                             cagcagCTTGCGCGCCTTGCGCCAGGTGCCGTCGGGCACGATCAGCAGCAAAGGTTTGTCGCCCGCCTCGCCATAAGCTGTCAGCACCTGGGCGTCATCACCCGGGAACAGCAGCACCGggtg                                                                                                                    <  1:4572/123‑1 (MQ=255)
                                             cagcagCTTGCGCGCCTTGCGCCAGGTGCCGTCGGGCACGATCAGCAGCAAAGGTTTGTCGCCCGCCTCGCCATAAGCTGTCAGCACCTGGGCGTCATCACCCGGGAACAGCAGCACCGggtg                                                                                                                    >  2:4572/1‑123 (MQ=255)
                                             cagcagCTTGCGCGCCTTGCGCCAGGTGCCGTCGGGCACGATCAGCAGCAAAGGTTTGTCGCCCGCCTCGCCATAAGCTGTCAGCACCTGGGCGTCATCACCCGGGAACAGCAGCACCGGGTGGTATCCGGGGGTGGCGAgcaggtcat                                                                                          <  5:77835/149‑1 (MQ=255)
                                              agcagcTTGCGCGCCTTGCGCCAGGTGCCGTCGGGCACGATCAGCAGCAAAGGTTTGTCGCCCGCCTCGCCATAAGCTGTCAGCACCTGGGCGTCATCACCCGGGAACAGCAGCACCGGGTGGTATCCGGGGGTGGCGAgcaggtcatg                                                                                         <  3:50168/149‑1 (MQ=255)
                                               gcagcTTGCGCGCCTTGCGCCAGGTGCCGTCGGGCACGATCAGCAGCAAAGGTTTGTCGCCCGCCTCGCCATAAGCTGTCAGCACCTGGGCGTCATCACCCGGGAACAGCAGCACCGGGTGGTATCCGGGGGTGGCGAgcaggtcatg                                                                                         >  4:324658/1‑148 (MQ=255)
                                               gcagcTTGCGCGCCTTGCGCCAGGTGCCGTCGGGCACGATCAGCAGCAAAGGTTTGTCGCCCGCCTCGCCATAAGCTGTCAGCACCTGGGCGTCATCACCCGGGAACAGCAGCACCGGGTGGTATCCGGGGGTGGCGAgcaggtcatg                                                                                         >  4:330110/1‑148 (MQ=255)
                                               gcagcTTGCGCGCCTTGCGCCAGGTGCCGTCGGGCACGATCAGCAGCAAAGGTTTGTCGCCCGCCTCGCCATAAGCTGTCAGCACCTGGGCGTCATCACCCGGGAACAGCAGCACCGGGTGGTATCCGGGGGTGGCGAgcaggtcatg                                                                                         >  6:227415/1‑148 (MQ=255)
                                                        gcgcCTTGCGCCAGGTGCCGTCGGGCACGATCAGCAGCAAAGGTTTGTCGCCCGCCTCGCCATAAGCTGTCAGCACCTGGGCGTCATCACCCGGGaa                                                                                                                                   <  7:162514/97‑1 (MQ=255)
                                                        gcgcCTTGCGCCAGGTGCCGTCGGGCACGATCAGCAGCAAAGGTTTGTCGCCCGCCTCGCCATAAGCTGTCAGCACCTGGGCGTCATCACCCGGGaa                                                                                                                                   >  8:162514/1‑97 (MQ=255)
                                                          gcCTTGCGCCAGGTGCCGTCGGGCACGATCAGCAGCAAAGGTTTGTCGCCCGCCTCGCCATAAGCTGTCAGCACCTGGGCGTCATCACCCGGGAACAGCAGCACCGGGTGGTATCCGGGGGTGGCGAGCAGGTCATGCAGGTCATCGaa                                                                             <  1:244011/149‑1 (MQ=255)
                                                                 gcCAGGTGCCGTCGGGCACGATCAGCAGCAAAGGTTTGTCGCCCGCCTCGCCATAAGCTGTCAGCACCTGGGCGTCATCACCCGGGAACAGCAGCACCGGGTGGTATCCGGGGGTGGCGAGCAGGTCATGCAGGTCATCGAACACctct                                                                      >  7:289089/1‑149 (MQ=255)
                                                                 gcCAGGTGCCGTCGGGCACGATCAGCAGCAAAGGTTTGTCGCCCGCCTCGCCATAAGCTGTCAGCACCTGGGCGTCATCACCCGGGAACAGCAGCACCGGGTGGTATCCGGGGGTGGCGAGCAGGTCATGCAGGTCATCGAACACctct                                                                      >  5:93393/1‑149 (MQ=255)
                                                                 gcCAGGTGCCGTCGGGCACGATCAGCAGCAAAGGTTTGTCGCCCGCCTCGCCATAAGCTGTCAGCACCTGGGCGTCATCACCCGGGAACAGCAGCACCGGGTGGTATCCGGGGGTGGCGAGCAGGTCATGCAGGTCATCGAACACctct                                                                      <  2:234625/149‑1 (MQ=255)
                                                                  ccAGGTGCCGTCGGGCACGATCAGCAGCAAAGGTTTGTCGCCCGCCTCGCCATAAGCTGTCAGCACCTGGGCGTCATCACCCGGGAACAGCAGCACCGGGTGGTATCCGGGGGTGGCGAGCAGGTCATGCAGGTCATCGAACACCtctc                                                                     <  2:65681/149‑1 (MQ=255)
                                                                  ccAGGTGCCGTCGGGCACGATCAGCAGCAAAGGTTTGTCGCCCGCCTCGCCATAAGCTGTCAGCACCTGGGCGTCATCACCCGGGAACAGCAGCACCGGGTGGTATCCGGGGGTGGCGAGCAGGTCATGCAGGTCATCGAACACCtctc                                                                     <  7:184359/149‑1 (MQ=255)
                                                                     ggTGCCGTCGGGCACGATCAGCAGCAAAGGTTTGTCGCCCGCCTCGCCATAAGCTGTCAGCACCTGGGCGTCATCACCCGGGAACAGCAGCACCGGGTGGTATCCGGGGGTGGCGAGCAGGTCATGCAGGTCATCGAACACCTCTCCaa                                                                  <  6:93393/149‑1 (MQ=255)
                                                                         ccGTCGGGCACGATCAGCAGCAAAGGTTTGTCGCCCGCCTCGCCATAAGCTGTCAGCACCTGGGCGTCATCACCCGGGAACAGCAGCACCGGGTGGTATCCGGGGGTGGCGAGCAGGTCATGCAGGTCATCGAACACCTCTCCAATCCg                                                              >  8:218202/1‑149 (MQ=255)
                                                                                  aCGATCAGCAGCAAAGGTTTGTCGCCCGCCTCGCCATAAGCTGTCAGCACCTGGGCGTCATCACCCGGGAACAGCAGCACCGGGTGGTATCCGGGGGTGGCGAGCAGGTCATGCAGGTCATCGAACACctct                                                                      >  8:136748/1‑132 (MQ=255)
                                                                                  aCGATCAGCAGCAAAGGTTTGTCGCCCGCCTCGCCATAAGCTGTCAGCACCTGGGCGTCATCACCCGGGAACAGCAGCACCGGGTGGTATCCGGGGGTGGCGAGCAGGTCATGCAGGTCATCGAACACctct                                                                      <  7:136748/132‑1 (MQ=255)
                                                                                    gATCAGCAGCAAAGGTTTGTCGCCCGCCTCGCCATAAGCTGTCAGCACCTGGGCGTCATCACCCGGGAACAGCAGCACCGGGTGGTATCCGGGGGTGGCGAGCAGGTCATGCAGGTCATCGAACACCTCTCCAATCCGCAGCTCGGCAt                                                   >  6:290307/1‑149 (MQ=255)
                                                                                           agcaAAGGTTTGTCGCCCGCCTCGCCATAAGCTGTCAGCACCTGGGCGTCATCACCCGGGAACAGCAGCACCGGGTGGTATCCGGGGGTGGCGAGca                                                                                                >  5:295401‑M2/1‑95 (MQ=255)
                                                                                           agcaAAGGTTTGTCGCCCGCCTCGCCATAAGCTGTCAGCACCTGGGCGTCATCACCCGGGAACAGCAGCACCGGGTGGTATCCGGGGGTGGCGAGca                                                                                                <  6:295401‑M2/97‑3 (MQ=255)
                                                                                           agcaAAGGTTTGTCGCCCGCCTCGCCATAAGCTGTCAGCACCTGGGCGTCATCACCCGGGAACAGCAGCACCGGGTGGTATCCGGGGGTGGCGAGCAGGTCATGCAGGTCATCGAACACCTCTCCAATCCGCAGCTCGGCATTGTTCAg                                            <  7:218202/149‑1 (MQ=255)
                                                                                           agcaAAGGTTTGTCGCCCGCCTCGCCATAAGCTGTCAGCACCTGGGCGTCATCACCCGGGAACAGCAGCACCGGGTGGTATCCGGGGGTGGCGAGCAGGTCATGCAGGTCATCGAACACCTCTCCAATCCGCAGCTCGGCATTGTTCAg                                            <  8:160526/149‑1 (MQ=255)
                                                                                            gcaAAGGTTTGTCGCCCGCCTCGCCATAAGCTGTCAGCACCTGGGCGTCATCACCCGGGAACAGCAGCACCGGGTGGTATCCGGGGGTGGCGAGCAGGTCATGCAGGTCATCGAACACCTCTCCAATCCGCAGCTCGGCATTGTTCAgg                                           >  2:221519/1‑149 (MQ=255)
                                                                                                  gTTTGTCGCCCGCCTCGCCATAAGCTGTCAGCACCTGGGCGTCATCACCCGGGAACAGCAGCACCGGGTGGTATCCGGGGGTGGCGAGCAGGTCATGCAGGTCATCGAACACCTCTCCAATCCGCAGCTCGGCATTGTTCAGGCCAAgg                                     <  3:330110/149‑1 (MQ=255)
                                                                                                  gTTTGTCGCCCGCCTCGCCATAAGCTGTCAGCACCTGGGCGTCATCACCCGGGAACAGCAGCACCGGGTGGTATCCGGGGGTGGCGAGCAGGTCATGCAGGTCATCGAACACCTCTCCAATCCGCAGCTCGGCATTGTTCAGGCCAAgg                                     <  3:324658/149‑1 (MQ=255)
                                                                                                   tttGTCGCCCGCCTCGCCATAAGCTGTCAGCACCTGGGCGTCATCACCCGGGAACAGCAGCACCGGGTGGTATCCGGGGGTGGCGAGCAGGTCATGCAGGTCATCGAACACCTCTCCAATCCGCAGCTCGGCATTGTTCAGGCCAAggg                                    >  7:71785/1‑149 (MQ=255)
                                                                                                      gTCGCCCGCCTCGCCATAAGCTGTCAGCACCTGGGCGTCATCACCCGGGAACAGCAGCACCGGGTGGTATCCGGGGGTGGCGAGCAGGTCATGCAGGTCATCGAACACCTCTCCAATCCGCAGCTCGGCATTGTTCAGGCCAAGGGCAg                                 >  6:312189/1‑149 (MQ=255)
                                                                                                       tCGCCCGCCTCGCCATAAGCTGTCAGCACCTGGGCGTCATCACCCGGGAACAGCAGCACCGGGTGGTATCCGGGGGTGGCGAGCAGGTCATGCAGGTCATCGAACACCTCTCCAATCCGCAGCTCGGCATTGTTCAGGCCAAGGGCAGc                                >  8:306353/1‑149 (MQ=255)
                                                                                                               cTCGCCATAAGCTGTCAGCACCTGGGCGTCATCACCCGGGAACAGCAGCACCGGGTGGTATCCGGGTGTGGCGAGCAGGTCATGCAGGTCATCGAACACCTCTCCAATCCGCAGCTCgg                                                      <  5:147941/119‑1 (MQ=255)
                                                                                                               cTCGCCATAAGCTGTCAGCACCTGGGCGTCATCACCCGGGAACAGCAGCACCGGGTGGTATCCGGGGGTGGCGAGCAGGTCATGCAGGTCATCGAACACCTCTCCAATCCGCAGCTCgg                                                      >  6:147941/1‑119 (MQ=255)
                                                                                                                 cGCCATAAGCTGTCAGCACCTGGGCGTCATCACCCGGGAACAGCAGCACCGGGTGGTATCCGGGGGTGGCGAGCAGGTCATGCAGGTCATCGAACACCTCTCCAATCCGCAGCTCGGCATTGTTCAGGCCAAGGGCAGCCAGGCGCGcc                      >  4:28748/1‑149 (MQ=255)
                                                                                                                               aGCACCTGGGCGTCATCACCCGGGAACAGCAGCACCGGGTGGTATCCGGGGGTGGCGAGCAGGTCATGCAGGTCATCGAACACCTCTCCAATCCGCAGCTCGGCATTGTTCAGGCCAAGGGCAGCCAGGCGCGCCGTGTTCAGGGCAt         <  5:290307/148‑1 (MQ=255)
                                                                                                                                 cACCTGGGCGTCATCACCCGGGAACAGCAGCACCGGGTGGTATCCGGGGGTGGCGAGCAGGTCATGCAGGTCATCGAACACCTCTCCAATCCGCAGCTCGGCATTGTTCAGGCCAAGGGCAGCCAGGCGCGCCGTGTTCAGGGCATggg      <  5:312189/149‑1 (MQ=255)
                                                                                                                                    cTGctcgccacccccggataccacccggtgctgctgttcccgggtgatgacgcccaggtgctgacagcttatggcgaggcgggcgacaaacctttgctgctgatcgtgcccgacggcacctggcgcaaggcgcgcaagctgctgtacct   <  7:160526‑M1/149‑147 (MQ=255)
                                                                                                                                    cTGGGCGTCATCACCCGGGAACAGCAGCACCGGGTGGTATCCGGGGGTGGCGAGCAGGTCATGCAGGTCATCGAACACCTCTCCAATCCGCAGCTCGGCATTGTTCAGGCCAAGGGCAGCCAGGCGCGCCGTGTTCAGGGCATGGGCAg   >  2:1972/1‑149 (MQ=255)
                                                                                                                                     tGctcgccacccccggataccacccggtgctgctgttcccgggtgatgacgcccaggtgctgacagcttatggcgaggcgggcgacaaacctttgctgctgatcgtgcccgacggcacctggcgcaaggcgcgcaagctgctgtacct   >  6:38565‑M1/1‑2 (MQ=255)
                                                                                                                                     tGctcgccacccccggataccacccggtgctgctgttcccgggtgatgacgcccaggtgctgacagcttatggcgaggcgggcgacaaacctttgct                                                      <  6:295401‑M1/97‑96 (MQ=255)
                                                                                                                                     tGctcgccacccccggataccacccggtgctgctgttcccgggtgatgacgcccaggtgctgacagcttatggcgaggcgggcgacaaacctttgct                                                      >  5:295401‑M1/1‑2 (MQ=255)
                                                                                                                                     tGGGCGTCATCACCCGGGAACAGCAGCACCGGGTGGTATCCGGGGGTGGCGAGcaggtgctgacagcttatggcgaggcgggcgacaaacctttgctgctgatcgtgcccgacggcacctggcgcaaggcgcgcaagctgctgtacct   <  1:144104‑M2/148‑96 (MQ=255)
                                                                                                                                      gggCGTCATCACCCGGGAACAGCAGCACCGGGTGGTATCCGGGGGTGGCGAGcaggtgctgacagcttatggcgaggcgggcgacaaacctttgctgctgatcgtgcccgacggcacctggcgcaaggcgcgcaagctgctgtacctg  <  1:192725‑M2/148‑97 (MQ=255)
                                                                                                                                      |                                                                                                                                                   
CCCCAGCGTCACCCGTGGCAGCCCCCCCAGCAACGGGTTCAGGTACAGCAGCTTGCGCGCCTTGCGCCAGGTGCCGTCGGGCACGATCAGCAGCAAAGGTTTGTCGCCCGCCTCGCCATAAGCTGTCAGCACCTGGGCGTCATCACCCGGGAACAGCAGCACCGGGTGGTATCCGGGGGTGGCGAGCAGGTCATGCAGGTCATCGAACACCTCTCCAATCCGCAGCTCGGCATTGTTCAGGCCAAGGGCAGCCAGGCGCGCCGTGTTCAGGGCATGGGCAGT  >  NC_002947/5134544‑5134825

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.