New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 5134678 | 49 (0.830) | 3 (0.050) | 3/246 | NT | 6.2% | coding (262/600 nt) | PP_4520 | hypothetical protein |
? | NC_002947 | = 5134729 | 44 (0.770) | coding (211/600 nt) | PP_4520 | hypothetical protein |
AGGTACAGCAGCTTGCGCGCCTTGCGCCAGGTGCCGTCGGGCACGATCAGCAGCAAAGGTTTGTCGCCCGCCTCGCCATAAGCTGTCAGCACCTGGGCGTCATCACCCGGGAACAGCAGCACCGGGTGGTATCCGGGGGTGGCGAGCAGGTCATGCAGGTCATCGAACACCTCTCCAATCCGCAGCTCGGCATTGTTCAGGCCAAGGGCAGCCAGGCGCG‑CCGTGTTCAGGGCATGGGCAGTTTCACTGGGGTGCTGCAGCAGGATCACACGGGTGCGGCTGT > NC_002947/5134584‑5134866 | aGGTACAGCAGCTTGCGCGCCTTGCGCCAGGTGCCGTCGGGCACGATCAGCAGCAAAGGTTTGTCGCCCGCCTCGCCATAAGCTGTCAGCACCTGGGCGTCATCACCCGGGAACAGCAGCACCGGGTGGTATCCGGGGGTGGCGAGcag < 7:160526‑M2/149‑4 (MQ=255) aGGTACAGCAGCTTGCGCGCCTTGCGCCAGGTGCCGTCGGGCACGATCAGCAGCAAAGGTTTGTCGCCCGCCTCGCCATAAGCTGTCAGCACCTGGGCGTCATCACCCGGGAACAGCAGCACCGGGTGGTATCCGGGGGTGGCGAGca > 6:38565‑M2/1‑146 (MQ=255) cagcagCTTGCGCGCCTTGCGCCAGGTGCCGTCGGGCACGATCAGCAGCAAAGGTTTGTCGCCCGCCTCGCCATAAGCTGTCAGCACCTGGGCGTCATCACCCGGGAACAGCAGCACCGGGTGGTATCCGGGGGTGGCGAgcaggtcat < 5:77835/149‑1 (MQ=255) agcagcTTGCGCGCCTTGCGCCAGGTGCCGTCGGGCACGATCAGCAGCAAAGGTTTGTCGCCCGCCTCGCCATAAGCTGTCAGCACCTGGGCGTCATCACCCGGGAACAGCAGCACCGGGTGGTATCCGGGGGTGGCGAgcaggtcatg < 3:50168/149‑1 (MQ=255) gcagcTTGCGCGCCTTGCGCCAGGTGCCGTCGGGCACGATCAGCAGCAAAGGTTTGTCGCCCGCCTCGCCATAAGCTGTCAGCACCTGGGCGTCATCACCCGGGAACAGCAGCACCGGGTGGTATCCGGGGGTGGCGAgcaggtcatg > 4:330110/1‑148 (MQ=255) gcagcTTGCGCGCCTTGCGCCAGGTGCCGTCGGGCACGATCAGCAGCAAAGGTTTGTCGCCCGCCTCGCCATAAGCTGTCAGCACCTGGGCGTCATCACCCGGGAACAGCAGCACCGGGTGGTATCCGGGGGTGGCGAgcaggtcatg > 4:324658/1‑148 (MQ=255) gcagcTTGCGCGCCTTGCGCCAGGTGCCGTCGGGCACGATCAGCAGCAAAGGTTTGTCGCCCGCCTCGCCATAAGCTGTCAGCACCTGGGCGTCATCACCCGGGAACAGCAGCACCGGGTGGTATCCGGGGGTGGCGAgcaggtcatg > 6:227415/1‑148 (MQ=255) gcCTTGCGCCAGGTGCCGTCGGGCACGATCAGCAGCAAAGGTTTGTCGCCCGCCTCGCCATAAGCTGTCAGCACCTGGGCGTCATCACCCGGGAACAGCAGCACCGGGTGGTATCCGGGGGTGGCGAGCAGGTCATGCAGGTCATCGaa < 1:244011/149‑1 (MQ=255) gcCAGGTGCCGTCGGGCACGATCAGCAGCAAAGGTTTGTCGCCCGCCTCGCCATAAGCTGTCAGCACCTGGGCGTCATCACCCGGGAACAGCAGCACCGGGTGGTATCCGGGGGTGGCGAGCAGGTCATGCAGGTCATCGAACACctct < 2:234625/149‑1 (MQ=255) gcCAGGTGCCGTCGGGCACGATCAGCAGCAAAGGTTTGTCGCCCGCCTCGCCATAAGCTGTCAGCACCTGGGCGTCATCACCCGGGAACAGCAGCACCGGGTGGTATCCGGGGGTGGCGAGCAGGTCATGCAGGTCATCGAACACctct > 7:289089/1‑149 (MQ=255) gcCAGGTGCCGTCGGGCACGATCAGCAGCAAAGGTTTGTCGCCCGCCTCGCCATAAGCTGTCAGCACCTGGGCGTCATCACCCGGGAACAGCAGCACCGGGTGGTATCCGGGGGTGGCGAGCAGGTCATGCAGGTCATCGAACACctct > 5:93393/1‑149 (MQ=255) ccAGGTGCCGTCGGGCACGATCAGCAGCAAAGGTTTGTCGCCCGCCTCGCCATAAGCTGTCAGCACCTGGGCGTCATCACCCGGGAACAGCAGCACCGGGTGGTATCCGGGGGTGGCGAGCAGGTCATGCAGGTCATCGAACACCtctc < 7:184359/149‑1 (MQ=255) ccAGGTGCCGTCGGGCACGATCAGCAGCAAAGGTTTGTCGCCCGCCTCGCCATAAGCTGTCAGCACCTGGGCGTCATCACCCGGGAACAGCAGCACCGGGTGGTATCCGGGGGTGGCGAGCAGGTCATGCAGGTCATCGAACACCtctc < 2:65681/149‑1 (MQ=255) ggTGCCGTCGGGCACGATCAGCAGCAAAGGTTTGTCGCCCGCCTCGCCATAAGCTGTCAGCACCTGGGCGTCATCACCCGGGAACAGCAGCACCGGGTGGTATCCGGGGGTGGCGAGCAGGTCATGCAGGTCATCGAACACCTCTCCaa < 6:93393/149‑1 (MQ=255) ccGTCGGGCACGATCAGCAGCAAAGGTTTGTCGCCCGCCTCGCCATAAGCTGTCAGCACCTGGGCGTCATCACCCGGGAACAGCAGCACCGGGTGGTATCCGGGGGTGGCGAGCAGGTCATGCAGGTCATCGAACACCTCTCCAATCCg > 8:218202/1‑149 (MQ=255) aCGATCAGCAGCAAAGGTTTGTCGCCCGCCTCGCCATAAGCTGTCAGCACCTGGGCGTCATCACCCGGGAACAGCAGCACCGGGTGGTATCCGGGGGTGGCGAGCAGGTCATGCAGGTCATCGAACACctct > 8:136748/1‑132 (MQ=255) aCGATCAGCAGCAAAGGTTTGTCGCCCGCCTCGCCATAAGCTGTCAGCACCTGGGCGTCATCACCCGGGAACAGCAGCACCGGGTGGTATCCGGGGGTGGCGAGCAGGTCATGCAGGTCATCGAACACctct < 7:136748/132‑1 (MQ=255) gATCAGCAGCAAAGGTTTGTCGCCCGCCTCGCCATAAGCTGTCAGCACCTGGGCGTCATCACCCGGGAACAGCAGCACCGGGTGGTATCCGGGGGTGGCGAGCAGGTCATGCAGGTCATCGAACACCTCTCCAATCCGCAGCTCGGCAt > 6:290307/1‑149 (MQ=255) agcaAAGGTTTGTCGCCCGCCTCGCCATAAGCTGTCAGCACCTGGGCGTCATCACCCGGGAACAGCAGCACCGGGTGGTATCCGGGGGTGGCGAGca < 6:295401‑M2/97‑3 (MQ=255) agcaAAGGTTTGTCGCCCGCCTCGCCATAAGCTGTCAGCACCTGGGCGTCATCACCCGGGAACAGCAGCACCGGGTGGTATCCGGGGGTGGCGAGca > 5:295401‑M2/1‑95 (MQ=255) agcaAAGGTTTGTCGCCCGCCTCGCCATAAGCTGTCAGCACCTGGGCGTCATCACCCGGGAACAGCAGCACCGGGTGGTATCCGGGGGTGGCGAGCAGGTCATGCAGGTCATCGAACACCTCTCCAATCCGCAGCTCGGCATTGTTCAg < 7:218202/149‑1 (MQ=255) agcaAAGGTTTGTCGCCCGCCTCGCCATAAGCTGTCAGCACCTGGGCGTCATCACCCGGGAACAGCAGCACCGGGTGGTATCCGGGGGTGGCGAGCAGGTCATGCAGGTCATCGAACACCTCTCCAATCCGCAGCTCGGCATTGTTCAg < 8:160526/149‑1 (MQ=255) gcaAAGGTTTGTCGCCCGCCTCGCCATAAGCTGTCAGCACCTGGGCGTCATCACCCGGGAACAGCAGCACCGGGTGGTATCCGGGGGTGGCGAGCAGGTCATGCAGGTCATCGAACACCTCTCCAATCCGCAGCTCGGCATTGTTCAgg > 2:221519/1‑149 (MQ=255) gTTTGTCGCCCGCCTCGCCATAAGCTGTCAGCACCTGGGCGTCATCACCCGGGAACAGCAGCACCGGGTGGTATCCGGGGGTGGCGAGCAGGTCATGCAGGTCATCGAACACCTCTCCAATCCGCAGCTCGGCATTGTTCAGGCCAAgg < 3:330110/149‑1 (MQ=255) gTTTGTCGCCCGCCTCGCCATAAGCTGTCAGCACCTGGGCGTCATCACCCGGGAACAGCAGCACCGGGTGGTATCCGGGGGTGGCGAGCAGGTCATGCAGGTCATCGAACACCTCTCCAATCCGCAGCTCGGCATTGTTCAGGCCAAgg < 3:324658/149‑1 (MQ=255) tttGTCGCCCGCCTCGCCATAAGCTGTCAGCACCTGGGCGTCATCACCCGGGAACAGCAGCACCGGGTGGTATCCGGGGGTGGCGAGCAGGTCATGCAGGTCATCGAACACCTCTCCAATCCGCAGCTCGGCATTGTTCAGGCCAAggg > 7:71785/1‑149 (MQ=255) gTCGCCCGCCTCGCCATAAGCTGTCAGCACCTGGGCGTCATCACCCGGGAACAGCAGCACCGGGTGGTATCCGGGGGTGGCGAGCAGGTCATGCAGGTCATCGAACACCTCTCCAATCCGCAGCTCGGCATTGTTCAGGCCAAGGGCAg > 6:312189/1‑149 (MQ=255) tCGCCCGCCTCGCCATAAGCTGTCAGCACCTGGGCGTCATCACCCGGGAACAGCAGCACCGGGTGGTATCCGGGGGTGGCGAGCAGGTCATGCAGGTCATCGAACACCTCTCCAATCCGCAGCTCGGCATTGTTCAGGCCAAGGGCAGc > 8:306353/1‑149 (MQ=255) cTCGCCATAAGCTGTCAGCACCTGGGCGTCATCACCCGGGAACAGCAGCACCGGGTGGTATCCGGGTGTGGCGAGCAGGTCATGCAGGTCATCGAACACCTCTCCAATCCGCAGCTCgg < 5:147941/119‑1 (MQ=255) cTCGCCATAAGCTGTCAGCACCTGGGCGTCATCACCCGGGAACAGCAGCACCGGGTGGTATCCGGGGGTGGCGAGCAGGTCATGCAGGTCATCGAACACCTCTCCAATCCGCAGCTCgg > 6:147941/1‑119 (MQ=255) cGCCATAAGCTGTCAGCACCTGGGCGTCATCACCCGGGAACAGCAGCACCGGGTGGTATCCGGGGGTGGCGAGCAGGTCATGCAGGTCATCGAACACCTCTCCAATCCGCAGCTCGGCATTGTTCAGGCCAAGGGCAGCCAGGCGCG‑cc > 4:28748/1‑149 (MQ=255) aGCACCTGGGCGTCATCACCCGGGAACAGCAGCACCGGGTGGTATCCGGGGGTGGCGAGCAGGTCATGCAGGTCATCGAACACCTCTCCAATCCGCAGCTCGGCATTGTTCAGGCCAAGGGCAGCCAGGCGCG‑CCGTGTTCAGGGCAt < 5:290307/148‑1 (MQ=255) cACCTGGGCGTCATCACCCGGGAACAGCAGCACCGGGTGGTATCCGGGGGTGGCGAGCAGGTCATGCAGGTCATCGAACACCTCTCCAATCCGCAGCTCGGCATTGTTCAGGCCAAGGGCAGCCAGGCGCG‑CCGTGTTCAGGGCATggg < 5:312189/149‑1 (MQ=255) cTGGGCGTCATCACCCGGGAACAGCAGCACCGGGTGGTATCCGGGGGTGGCGAGCAGGTCATGCAGGTCATCGAACACCTCTCCAATCCGCAGCTCGGCATTGTTCAGGCCAAGGGCAGCCAGGCGCG‑CCGTGTTCAGGGCATGGGCAg > 2:1972/1‑149 (MQ=255) tGGGCGTCATCACCCGGGAACAGCAGCACCGGGTGGTATCCGGGGGTGGCGAGcaggtgctgacagcttatggcgaggcgggcgacaaacctttgctgctgatcgtgcccgacggcacctggcgcaaggcgcgcaagctgctgtacct < 1:144104‑M2/148‑96 (MQ=255) gggCGTCATCACCCGGGAACAGCAGCACCGGGTGGTATCCGGGGGTGGCGAGcaggtgctgacagcttatggcgaggcgggcgacaaacctttgctgctgatcgtgcccgacggcacctggcgcaaggcgcgcaagctgctgtacctg < 1:192725‑M2/148‑97 (MQ=255) ggCGTCATCACCCGGGAACAGCAGCACCGGGTGGTATCCGGGGGTGGCGAGCAGGTCATGCAGGTCATCGAACACCTCTCCAATCCGCAGCTCGGCATTGTTCAGGCCAAGGGCAGCCAGGCGCG‑CCGTGTTCAGGGCATGGGCAGttt < 8:289089/149‑1 (MQ=255) gCGTCATCACCCGGGAACAGCAGCACCGGGTGGTATCCGGGGGTGGCGAGcaggtgctgacagcttatggcgaggcgggcgacaaacctttgctgctgatcgtgcccgacggcacctggcgcaaggcgcgcaagctgctgtacctgaac > 2:192725‑M2/1‑50 (MQ=255) gTCATCACCCGGGAACAGCAGCACCGGGTGGTATCCGGGGGTGGCGAGCAGGTCATGCAGGTCATCGAACACCTCTCCAATCCGCAGCTCGGCATTGTTCAGGCCAAGGGCAGCCAGGCGCG‑CCGTGTTCAGGGCATGGGCAGTTTCAc < 1:1972/149‑1 (MQ=255) gTCATCACCCGGGAACAGCAGCACCGGGTGGTATCCGGGGGTGGCGAGCAGGTCATGCAGGTCATCGAACACCTCTCCAATCCGCAGCTCGGCATTGTTCAGGCCAAGGGCAGCCAGGCGCG‑CCGTGTTCAGGGCATGGGCAGTTTCAc > 2:249421/1‑149 (MQ=255) gTCATCACCCGGGAACAGCAGCACCGGGTGGTATCCGGGGGTGGCGAGCACGTCATCCAGGTCATCGCACACCTCTCCAATCCGCAGCTCGGCATTGTTCAGGCCAAGGGCAGCCAGGCGCG‑CCGTGTTCAGGGCATGGGCAGTTTCAc > 8:159532/1‑149 (MQ=255) atcaCCCGGGAACAGCAGCACCGGGTGGTATCCGGGGGTGGCGAGCAGGTCATGCAGGTCATCGAACACCTCTCCAATCCGCAGCTCGGCATTGTTCAGGCCAAGGGCAGCCAGGCGCG‑CCGTGTTCAGGGCATGGGCAGTTTCACTgg > 2:266758/1‑149 (MQ=255) atcaCCCGGGAACAGCAGCACCGGGTGGTATCCGGGGGTGGCGAGCAGGTCATGCAGGTCATCGAACACCTCTCCAATCCGCAGCTCGGCATTGTTCAGGCCAAGGGCAGCCAGGCGCG‑CCGTGTTCAGGGCATGGGCAGTTTCACTgg < 7:306353/149‑1 (MQ=255) tcaCCCGGGAACAGCAGCACCGGGTGGTATCCGGGGGTGGCGAGCAGGTCATGCAGGTCATCGAACACCTCTCCAATCCGCAGCTCGGCATTGTTCAGGCCAAGGGCAGCCAGGCGCG‑CCGTGTTCAGGGCATGGGCAGTTTCACTggg < 1:266758/149‑1 (MQ=255) aCCCGGGAACAGCAGCACCGGGTGGTATCCGGGGGTGGCGAGCAGGTCATGCAGGTCATCGAACACCTCTCCAATCCGCAGCTCGGCATTGTTCAGGCCAAGGGCAGCCAGGCGCGCCCGTGTTCAGGGCATGGGCAGTTTCACTggg < 1:221519/148‑1 (MQ=255) ccGGGAACAGCAGCACCGGGTGGTATCCGGGGGTGGCGAGCAGGTCATGCAGGTCATCGAACACCTCTCCAATCCGCAg < 4:325024/79‑1 (MQ=255) ccGGGAACAGCAGCACCGGGTGGTATCCGGGGGTGGCGAGCAGGTCATGCAGGTCATCGAACACCTCTCCAATCCGCAg > 3:325024/1‑79 (MQ=255) cagcagCACCGGGTGGTATCCGGGGGTGGCGAGCAGGTCATGCAGGTCATCGAACACCTCTCCAATCCGCAGCTCGGCATTGTTCAGGCCAAGGGCAGCCAGGCGCG‑CCGTGTTCAGGGCATGGGCAGTTTCACTGGGGTGCTgcagca < 5:227415/149‑1 (MQ=255) cagcaCCGGGTGGTATCCGGGGGTGGCGAGCAGGTCATGCAGGTCATCGAACACCTCTCCAATCCGCAGCTCGGCATTGTTCAGGCCAAGGGCAGCCAGGCGCG‑CCGTGTTCAGGGCATGGGCAGTTTCACTGGGGTGCTGCAGCAGGa > 7:156706/1‑149 (MQ=255) agcaCCGGGTGGTATCCGGGGGTGGCGAGCAGGTCATGCAGGTCATCGAACACCTCTCCAATCCGCAGCTCGGCATTGTTCAGGCCAAGGGCAGCCAGGCGCG‑CCGTGTTCAGGGCATGGGCAGTTTCACTGGGGTGCTGCAGCAGGAt < 8:71785/149‑1 (MQ=255) gtggtATCCGGGGGTGGCGAGCAGGTCATGCAGGTCATCGAACACCTCTCCAATCCGCAGCTCGGCATTGTTCAGGCCAAGGGCAGCCAGGCGCG‑CCGTGTTCAGGGc < 1:313119/108‑1 (MQ=255) gtggtATCCGGGGGTGGCGAGCAGGTCATGCAGGTCATCGAACACCTCTCCAATCCGCAGCTCGGCATTGTTCAGGCCAAGGGCAGCCAGGCGCG‑CCGTGTTCAGGGc > 2:313119/1‑108 (MQ=255) gtATCCGGGGGTGGCGAGCAGGTCATGCAGGTCATCGAACACCTCTCCAATCCGCAGCTCGGCATTGTTCAGGCCAAGGGCAGCCAg > 5:111233/1‑87 (MQ=255) gtATCCGGGGGTGGCGAGCAGGTCATGCAGGTCATCGAACACCTCTCCAATCCGCAGCTCGGCATTGTTCAGGCCAAGGGCAGCCAg < 6:111233/87‑1 (MQ=255) aTCCGGGGGTGGCGAGCAGGTCATGCAGGTCATCGAACACCTCTCCAATCCGCAGCTCGGCATTGTTCAGGCCAAGGGCAGCCAGGCGCG‑CCGTGTTCAGGGCATGGGCAGTTTCACTGGGGTGCTGCAGCAGGATCACACGGGTGCgg > 6:23858/1‑149 (MQ=255) gggggTGGCGAGCAGGTCATGCAGGTCATCGAACACCTCTCCAATCCGCAGCTCGGCATTGTTCAGGCCAAGGGCAGCCAGGCGCG‑CCGTGTTCAGGGCATGGGCAGTTTCACTGGGGTGCTGCAGCAGGATCACACGGGTGCGGCTGt < 8:156706/149‑1 (MQ=255) | AGGTACAGCAGCTTGCGCGCCTTGCGCCAGGTGCCGTCGGGCACGATCAGCAGCAAAGGTTTGTCGCCCGCCTCGCCATAAGCTGTCAGCACCTGGGCGTCATCACCCGGGAACAGCAGCACCGGGTGGTATCCGGGGGTGGCGAGCAGGTCATGCAGGTCATCGAACACCTCTCCAATCCGCAGCTCGGCATTGTTCAGGCCAAGGGCAGCCAGGCGCG‑CCGTGTTCAGGGCATGGGCAGTTTCACTGGGGTGCTGCAGCAGGATCACACGGGTGCGGCTGT > NC_002947/5134584‑5134866 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |