| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 5135362 | 66 (1.120) | 4 (0.070) | 4/244 | NT | 5.8% | coding (1208/1566 nt) | PP_4521 | aerotaxis receptor |
| ? | NC_002947 | = 5135384 | 68 (1.210) | coding (1186/1566 nt) | PP_4521 | aerotaxis receptor | |||||
ACCGCCACGGCAATCCCGCTCAGCGCCGCCTGCACCGCCTCGACACTGTGCACACTGTCCCGGGAAATCTGCTCGCCCCGGCTGGCAGTGCTCACCGCTCGCTCCGCCCCGGCCCTCAACGAGGCGATGATATGGTGGATCTCTTCGGTCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5135212‑5135362‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggtcgTTGGCGCAGCGTACCCGCGCGTCGACCGAAGAGATCCACCATATCATCGCCTCGTTGAGGGCCGGGGCGGAGCGAGCGGTGAGCACTGCCAGCCGGGGCGAGCAGATTTCCCGGGACAGTGTGCACAGTGTCGAGGCGGTGCAGGCGG < NC_002947/5135384‑5135237 ACCGCCACGGCAATCCCGCTCAGCGCCGCCTGCACCGCCTCGACACTGTGCACACTGTCCCGGGAAATCTGCTCGCCCCGGCTGGCAGTGCTCACCGCTCGCTCCGCCCCGGCCCTCAACGAGGCGATGATATGGTGGATCTCTTCG < 3:18145/147‑1ACCGCCACGGCAATCCCGCTCAGCGCCGCCTGCACCGCCTCGACACTGTGCACACTGTCCCGGGAAATCTGCTCGCCCCGGCTGGCAGTGCTCACCGCTCGCTCCGCCCCGGCCCTCAACGAGGCGATGATATGGTGGATCTCTTCG < 6:249294/147‑1 TGCACCGCCTCGACACTGTGCACACTGTCCCGGGAAATCTGCTCGCCCCGGCTGGCAGTGCTCACCGCTCGCTCCGCCCCGGCCCTCAACGAGGCGATGATATGGTGGATCTCTTCGGTCGTTGGCGCAGCGTACCCGCGCGTCGACC > 2:189858/1‑148 ACCGCCTCGACACTGTGCACACTGTCCCGGGAAATCTGCTCGCCCCGGCTGGCAGTGCTCACCGCTCGCTCCGCCCCGGCCCTCAACGAGGCGATGATATGGTGGATCTCTTCGGTCGTTGGCGCAGCGTACCCGCGCGTCGACCGAAG < 1:189858/149‑1 TCTGCTCGCCCCGGCTGGCAGTGCTCACCGCTCGCTCCGCCCCGGCCCTCAACGAGGCGATGATATGGTGGATCTCTTC < 1:55851/79‑1 TCTGCTCGCCCCGGCTGGCAGTGCTCACCGCTCGCTCCGCCCCGGCCCTCAACGAGGCGATGATATGGTGGATCTCTTC > 2:55851/1‑79 CAGTGCTCACCGCTCGCTCCGCCCCGGCCCTCAACGAGGCGATGATATGGTGGATCTCTTCGGTCGTTGGCGCAGCGTACCCGCGCGTCGACCG < 7:4130/94‑1 CAGTGCTCACCGCTCGCTCCGCCCCGGCCCTCAACGAGGCGATGATATGGTGGATCTCTTCGGTCGTTGGCGCAGCGTACCCGCGCGTCGACCG > 8:4130/1‑94 ggTCGGTCGTGTGCGCAGCGAACCCGCGCGTCGACCGAAGAGATCCACCATATCATCGCCTCGTTGAGGGCCGGGGCGGAGCGAGCGGTGAGCACTGCCAGCCGGGGCGAGCAGATTTCCCGGGACAGTGTGCACAGTGTCGAGGCGGT < 6:264060/147‑1 CGGTCGTTGGCGCAGCGTACCCGCGCGTCGACCGAAGAGATCCACCATATCATCGCCTCGTTGAGGGCCGGGGCGGAGCGAGCGGTGAGCACTGCCAGCCGGGGCGAGCAGATTTCCCGGGACAGTGTGCACAGTGTCGAGGCGGTG > 5:31700/1‑147 GTTGGCGCAGCGTACCCGCGCGTCGACCGAAGAGATCCACCATATCATCGCCTCGTTGAGGGCCGGGGCGGAGCGAGCGGTGAGCACTGCCAGCCGGGGCGAGCAGATTTCCCGGGACAGTGTGCACAGTGTCGAGGCGGTGCAGGCGG < 1:183865/149‑1 ACCGCCACGGCAATCCCGCTCAGCGCCGCCTGCACCGCCTCGACACTGTGCACACTGTCCCGGGAAATCTGCTCGCCCCGGCTGGCAGTGCTCACCGCTCGCTCCGCCCCGGCCCTCAACGAGGCGATGATATGGTGGATCTCTTCGGTCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5135212‑5135362‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggtcgTTGGCGCAGCGTACCCGCGCGTCGACCGAAGAGATCCACCATATCATCGCCTCGTTGAGGGCCGGGGCGGAGCGAGCGGTGAGCACTGCCAGCCGGGGCGAGCAGATTTCCCGGGACAGTGTGCACAGTGTCGAGGCGGTGCAGGCGG < NC_002947/5135384‑5135237 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |